Labeo rohita (rohu): 127168258
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Entry
127168258 CDS
T09007
Symbol
sall1a
Name
(RefSeq) LOW QUALITY PROTEIN: sal-like protein 1a
KO
K19871
sal-like protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127168258 (sall1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127168258 (sall1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_11
zf-C2HC_2
IZUMO
zf-Di19
zf-C2H2_2
zf-C2HE
dsrm
zf-H2C2_5
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
127168258
NCBI-ProteinID:
XP_050970921
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All DBs
Position
7:complement(26709397..26722628)
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AA seq
1307 aa
AA seq
DB search
MSRRKQAKPQHFQSDSQLVLTEHNGDTETNPDDSPCKDSGAHVCSRCCAEFFELSDLEQH
QKNCTKNQLVLIVNENPVSPSGTFSPGSSPHNPDEQMNDTTNNADQAELTDLLEQNVLDK
EEAMDTEMSGVSAPHNDGSGRMAGGSPLSGVGSSHGALGSTGSNLGNSVISASLPQLGNL
TELGNFSMINSNVIIENLQSTKVAVAQFSQETRAAGGQRVAVPALMEQLLALQQQQIHQL
QLIEQIRHQILLLASQSPELQAPPSSSPVTLGSGTSPLTTLSSHLSQQLAAAAGLAQSIA
SQSASISSLKQMANVVQLPQNNSSVGESSQNLGAPGPATVNAQPSDKRPGNAGSLHPQLG
NPSLAKSSTPAFAMGSLLNPVANTLLPQPPPGNPIFSSALPSATTTVEDLNSLAALAQQR
KGKPPNVSSFEPKSSSEDTFFKHKCRFCGKVFGSDSALQIHLRSHTGERPYKCNICGNRF
STRGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSMPPEKPVTSWLDSKP
VLSTLTSSVGMLLPPTIPSLPPFIKKEENNSVAISSPSHSAKSDSGPADAPMKNTDSVLE
EGESTTLPTSNEKVEENNRLSSLITNMSSAVEGTIEYTTSNSPPMATNPLMPLMSEQFKA
KFPFGGLLDPLQGSETSKLQQLVENIDRKVTDPNECVICHRVLSCQSALKMHYRTHTGER
PFKCKVCGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQ
IPNTPLPDNYPESMGSDAGSFDERNFDDLDNFSDENMEGIEDGPDSSIPDTPKSADASQD
SLCSSPTPQESFGMESQERSANQGAEEEVHCDQGKSVENGVMEGDRFTNDSSSLGGDIES
QSAGSPAVSESTSSMQAPSPSNGTIQQQKSPSLEDRQQRALSLDHISAGLMQSHSASPGA
LDLTSINSSKDPLSMLFPFRERGTLKNTACDICGKTFACQSALDIHYRSHTKERPFICTV
CNRGFSTKGNLKQHMLTHQMRDLPSQLFEPNTSLASSPTPSILSVGPLSSMMKTEVNGFL
HSLQPEVKEMPSALVTSSASTSPVLSAAPPRRTPKQHYCTTCGKTFSSSSALQIHERTHT
GEKPFACTICGRAFTTKGNLKVHMGTHMWNSAPARRGRRLSVDGPMAFLGTNPVKFPELF
QKDLTGRAGNGDPTSFWNQYAAAFSNGLAMKTNEISVIQNGGLPPPLSGSVGNGGSSPIG
GLTGSMEKLHNSEPNPALAGLEKMASTENGTHFRFTRFMEDKEIVTN
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggaaacaagcgaagccgcagcatttccagtccgactcgcagctggtccta
accgagcacaatggggacacggagaccaacccggacgactccccctgtaaagactcgggt
gcccatgtctgcagcagatgttgcgcagagttctttgaactatcggatcttgaacaacac
cagaagaattgcactaagaatcaattagttctaattgtgaatgaaaatccagtgtctcct
tccggaaccttctccccaggctcctctcctcataatcctgatgagcagatgaatgataca
actaataacgcagatcaagcagagttgaccgaccttttggagcagaacgtacttgacaaa
gaggaggccatggacacggagatgtcaggagtctctgcgccccataatgatggaagtgga
cgtatggcaggtggcagcccgctcagtggcgttgggagcagccatggagctctgggcagc
actgggtccaatctggggaactctgtcatctctgcctcactacctcagctgggtaacttg
actgagctgggcaacttttccatgatcaacagcaacgtcatcattgaaaacctacagagc
accaaagtggctgtggcccagttctctcaagagaccagagcagcgggagggcaaagggtg
gctgtgccagccctcatggagcagcttttggccctacagcagcagcagatccatcagcta
cagctcatcgagcagattcgtcaccagattcttctgcttgcctcacagtcacctgagctc
caagcaccccctagttcttcccctgtgactttaggttcaggtactagcccactaaccact
cttagttcccatttgtctcaacagttggcagctgctgcagggttagcacagagcatagct
agccagtctgcaagcattagcagtttgaaacagatggctaatgttgtgcagctacctcag
aacaattccagtgtgggagagtcatctcaaaaccttggagcaccaggtccagctacagtt
aacgcccaaccttccgacaagaggccaggtaatgcaggaagcttgcatcctcagttagga
aatccgtcacttgcgaagtcatccacaccagcctttgcaatgggaagccttttgaatcct
gtggctaatacccttctacctcagcccccaccaggcaacccaatattctccagtgcacta
cccagtgctaccaccacagttgaggatctcaactcactggctgcacttgctcaacaaaga
aaaggcaagccacctaacgtctcctcttttgaaccgaagagtagctctgaggatacgttt
ttcaagcataagtgcaggttttgcggcaaggtgtttggcagtgacagtgctttgcagatt
cacttacgttctcacacaggggagaggccatacaaatgcaacatatgtggcaaccgcttt
tccacccggggtaacttgaaggttcattttcagcgtcataaagagaagtatccacacatt
cagatgaacccataccctgtcccagagcacctagacaatattcctacgagtactggcatt
ccctatggtatgtctatgcctcctgagaagccagtgactagctggctcgatagtaaacct
gttctgtctactctgacatcgtctgttggcatgttacttccaccaactataccaagcctg
cctccattcatcaagaaggaagagaataactcagtggctataagcagcccttctcattcc
gctaaaagcgactcaggtcctgctgatgcacccatgaagaacacagatagtgtgctggaa
gaaggggagagcacaaccctgcctacctcaaatgaaaaagttgaagaaaacaaccgtttg
tccagtttaattacaaacatgagctctgcagtggagggtactattgagtacaccacctcc
aacagccctccgatggccactaaccctcttatgcccctgatgtcagaacagttcaaagct
aagtttcctttcgggggtctccttgatcctctccaaggttcagaaacatcgaagcttcag
caactcgttgagaacatcgacaggaaagtgacagaccctaacgagtgcgttatctgccac
cgtgttcttagttgccagagtgcactcaaaatgcactaccgcacacacaccggggagagg
cctttcaaatgtaaagtgtgtggtcgtgccttcaccaccaagggcaacctcaagactcat
tacagcgtccatcgagctatgccgccactgagggtccagcattcttgtcctatttgccag
aagaagttcacaaatgctgtggtgcttcagcagcacattcgcatgcacatgggtggtcag
atccctaacacccctcttcctgacaactacccagagtccatgggatccgatgctggctca
tttgatgagagaaactttgatgatcttgacaacttctcagatgaaaacatggaaggaatc
gaggacggaccagacagcagcattccagacacaccaaagtcagctgatgcatctcaagac
agcctctgttcgtcccctacaccacaggagtcatttggcatggagagccaggagaggagt
gccaaccagggagcagaagaggaagtgcactgtgaccaagggaaatcagtggagaatgga
gtaatggagggagacagattcacaaatgactcctcttcgcttggaggtgacatcgaaagc
caaagtgccggaagtccagctgtctctgaatctacctcttccatgcaagctccatcaccc
tctaacggtactatccaacagcaaaagtcacctagtctggaggatcggcagcagagggca
ttgtcgttggaccacattagtgcgggtctcatgcagtctcattctgccagtcctggagct
ttggatcttacttcaattaactcatcaaaagatccccttagcatgcttttccccttccgt
gagcgaggcaccttgaagaatacagcatgtgacatctgtggcaaaacatttgcctgccag
agtgccttggacatccattaccgaagccataccaaagagagaccgttcatttgcacagta
tgcaaccggggcttttcaaccaaggggaacttgaagcaacatatgctgacccaccagatg
cgagatttgccctcccagctctttgagcctaacaccagtcttgcctccagcccaactcca
tccattctgtctgttggacccttgtcttctatgatgaagactgaggtcaacggctttctg
catagtcttcaacctgaagtaaaagaaatgccctcagcactggtgacctcatctgcttcc
acctctccagtactttcagctgccccaccacggaggacgcctaagcagcactactgtacc
acttgtgggaagacattttcctcctccagtgccctgcaaatccacgagagaacccatacg
ggagagaagcccttcgcttgcaccatctgtggacgagcatttaccaccaaaggaaatctc
aaggtgcatatgggtacccacatgtggaacagcgctcctgcacggcgtggtcgcaggctt
tcggtagatggtcccatggctttcctgggcacgaaccctgtaaagttccctgagctcttc
caaaaggacctaaccggtagggcaggaaacggagacccgaccagcttctggaatcagtac
gcagctgctttctctaacggcctggccatgaagaccaacgagatctctgtgatccagaac
ggaggcctgccccctccactgtcagggagcgtgggcaatgggggcagttctccgatcgga
ggcttgacaggcagcatggaaaagctgcataactctgagcccaatcctgctctggctggc
ctagaaaaaatggccagcaccgagaacgggactcactttcgcttcacacgcttcatggag
gacaaggagatagtgaccaactag
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