Labeo rohita (rohu): 127171582
Help
Entry
127171582 CDS
T09007
Symbol
cux1a
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein cut-like 1
KO
K09313
homeobox protein cut-like
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127171582 (cux1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
127171582 (cux1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HTH_40
Pribosyltran_N
Motif
Other DBs
NCBI-GeneID:
127171582
NCBI-ProteinID:
XP_050976279
LinkDB
All DBs
Position
10:5303292..5455855
Genome browser
AA seq
1480 aa
AA seq
DB search
MAANAGSMFQYWKRFDLQQLQKELDATAAALANRQDESEQSRKKLIDQSREFKKNTPEDL
RKQIAPLLKGFQAEIDALSKRSKESEAAFLSVYKRLIDVPDPVSTLEAAQQLQVTVRKMH
DLETENQRLKDTLQEYEREIAEVKNQEVTIKALKEKLEQYERSLLAKNTEEAPDQNQDRS
GREERESKGENLPNNYADKESQPQQSQDSRTEDLDVKTQSLQTALEATQAELHELKTKYD
EESTAKANEIEAVMTDLERANQRAEAAEREAVSLREQLTSAGKTLQPSNQIQKAPEMDKS
LEALSCSSLEAELGAKEREVERLAEDVQRLQASLAQLSETSTNQISQLEQQLSSKEALLK
QLEEKLQEQSDYEEIKRELCNLKSMEHNSSDHHSSVQDSSKPLEMLLTGKVHSQLSESAL
KRLANSDFTGSVGRKSKETTVENPQRLPATPVPTTLQGSPPPPSPQLLMRTGTATSESAA
SANGTHPFSPTGIGPDFFTPGMASVGATFPPLAGKMALNSLLQRQLMQTIYTKALQDPSP
SSVLFGPPHYATTNSLSSPLPPQSAGSPEVNGLAPSPSQSEGAGSTSEGEEMDTAEIARQ
VKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFLSDEQN
ILALRSIQGRQRENPGQNLNRVFQDVPKRRTGSEGSTRPGNITTRIRTPETGSDEAIKSI
LEQAKRELQVQKADGVGERQRRSGYHRGSGSYFQIYAHSLRLVESSQPPSSSSNSDENIR
SIXEQARREMEAQQVALEPVLKANSMVPTDLSLLGSPLSTLPYTPIAQSLKKPSTSPLLD
FHGGVKKEMGEVAVSDVGVDGVPKLGRLSESGGGLGGGSWREHWWSTGLSERRGTGQHSV
SEDAHSQEDSKEKLPRLGSTAPVAPASSLDYWKDWPSSESPYSQSSELSLQMPSGSETPQ
SSPLPSSSPLLSLPKVAKPVVPPLTPEQYEYYMYQEVDTVDLTQQVKDKLAKNGICQRIF
GEKVLGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWLNGELGQALLPMPGQTQEITP
KTSASCSPAPESPLSSAEESVKSQQEEQMCRASIQEPSEISESQPGTPLPLPLPGHAGLS
IQEMVAMSPELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLS
LKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSIGESHSLESGLSGSDLTQG
ASPQNLSQQQQQQQQQPQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKT
STVINWFHNYRSRIRRELFIEEIQAAAGEGGSPSARPGKSGGEGDNSCDGTESDSTAEGR
PSGSEERKGLLESPSLSHRDEDAEAEFPSASGTSRPRGGIIDSLFGIPESVSSAAATAAA
TPCRNPKDSSLRKKKAANLNNIIHRLEKAANRDEPHEWEF
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcgatgtttcaatattggaaacgctttgatttgcagcagctc
cagaaagaactggatgccaccgccgcagccctggccaacagacaggatgaaagcgagcag
tccaggaaaaaactcatcgaccaaagccgcgagttcaagaagaatactccagaggatttg
cgtaaacagatagctcctttgctgaagggcttccaagcagagatcgacgccttgagtaaa
agaagtaaagaatcagaggctgctttcctcagcgtgtacaagagattaatcgatgtccca
gatcctgtctcgactctggaggcagctcagcaactccaggtgactgttcggaagatgcac
gacttggagacagaaaaccagaggcttaaagatacactacaagagtacgaacgtgaaatc
gcagaggttaaaaaccaagaagtcactattaaagcacttaaagagaagctggagcagtat
gagcgttctctgctggccaagaacacagaggaagctcccgatcagaaccaggaccgatca
ggacgagaagagagggaaagcaaaggggaaaaccttcctaacaactatgcagacaaggag
agtcagccacagcagagccaggacagcaggacagaagacttggacgtgaaaacacagtcg
ttacaaacagcacttgaagcaactcaggcagaactccatgaactgaagacgaaatatgat
gaagaatccacagcaaaggccaatgagattgaagcggtgatgacagatctggaaagagcc
aatcagagggccgaggcggcagagagggaggccgtgagcctgagggagcagctcacttca
gctggcaaaaccctgcaaccatccaatcagatccagaaagcaccggaaatggacaagtct
ctggaggcgctatcttgcagcagtctggaggcagagctgggtgcgaaggagagggaggta
gagcgtttggctgaggacgttcagagacttcaggccagtctggcccagctcagcgagacc
tccaccaatcagatcagccagctcgagcagcagctgagctccaaagaggccctattaaag
caacttgaagaaaagcttcaagagcagtcagactacgaggagatcaaacgagaactctgc
aacctgaaatcaatggagcacaactcatcagatcatcactcttcagtacaggactcatcc
aagccgttggagatgttgctgacggggaaagtccatagccagctgtcagagagcgctttg
aaacgactggccaacagtgacttcactggatcagtggggcggaaaagtaaagaaaccaca
gtggaaaatccacagcgtcttcctgccactccagtccctaccacactccaggggtcccct
cctcccccctcccctcagcttttgatgaggacgggcaccgctacctccgaatctgctgcc
agtgccaacggtacccaccctttctcccccacgggcatcgggccagacttctttaccccc
ggcatggccagcgtgggcgccacgttccccccgttggctggcaaaatggcactcaactct
cttcttcagaggcagctcatgcaaaccatctacaccaaagccctccaggacccttctcca
agttctgtgctcttcgggccgccccattacgctacaaccaactctctctccagcccccta
ccccctcaatcagcgggcagcccggaggttaacggcctggcaccctctcccagccagtct
gagggtgcgggcagcacgtcggaaggggaggaaatggacacggctgagatcgctcggcag
gtcaaggagcagctgatcaaacacaacatcggccagcgcgtgttcggtcattatgtgttg
ggtctgtcccaaggctcggtcagtgagattctggcccggcccaaaccctggagcaagtta
actatccgtggcaaagagccctttcacaagatgaagcacttcctgtctgatgagcagaac
atcctggcgctgaggagcatccagggcaggcagagagagaacccaggccagaacctgaac
agagtgtttcaggatgttccgaagcgaagaaccggctcggaaggctccacgcggccaggt
aacatcaccacacgcatccgcacgcctgagactggctccgatgaagctatcaagtccatc
ttggagcaggccaagagagagttacaagtgcagaaagcagacggcgtgggggagaggcaa
cggcgatcaggttaccacagagggtcgggcagctatttccaaatatatgcacacagtcta
agacttgttgagagttcgcagcctccgtcctcctccagcaactccgacgagaacattcgt
tccatcnctgagcaggctcggagggagatggaggcccagcaggtggctctggagcccgta
ctgaaggccaactctatggtcccgaccgatctctcgctcctgggctccccgctctccacc
ctcccatacacccctatagctcagtctctgaagaagccctccacctctcctctcttggac
ttccacggcggggtgaagaaggagatgggtgaggtggccgtctcagatgtgggggtggac
ggagtgcccaagctcggacgtctctcggagagtggaggagggttaggtgggggttcttgg
agggagcactggtggagcacaggtctctctgagcgtcgcggaacagggcagcactccgtt
agtgaagatgcacacagccaagaggatagcaaggagaagctccctcgcctgggcagcact
gcacccgtggctcctgcttcctctctggattactggaaagactggcccagctcagagtcc
ccgtactcccagagctcagagctcagcctgcagatgcccagcggcagcgagacccctcag
agcagcccactgccttcctcctcgcctttactgtccctccccaaagtcgccaaacccgtg
gtgcccccgctcacacctgagcagtacgagtactacatgtaccaggaagtggacactgtc
gatctcacacagcaggtcaaagacaaactagccaagaatggcatctgccagcggatcttc
ggcgagaaggtgctaggcctctctcaggggagcgtgagcgacatgctctctcggccgaag
cactggagcaagctcacgcagaaaggaagagagccgtttatacgcatgcagttatggctg
aacggagagctgggccaggcgctgctgccaatgcctggacagacacaagagattactccg
aagacctcagccagctgcagtcctgccccagaatcccctctgagttcggccgaggagtcc
gttaaaagccagcaggaggagcagatgtgccgagcgtccatccaggagcccagcgaaatt
tccgagtcccaacccggcacgcctctaccgttacctctgccgggacacgcgggtctcagc
atacaagaaatggtagcgatgtcgcccgagctggacacctacgccatcactaagaaagtg
aaagaagttctgactgataacaacctcggccagcgtctgtttggcgagagcatcctgggt
ttgacgcagggctccgtgtctgatctgctggcccggcccaagccctggcacaagctcagc
ctgaagggtcgggagccgtttgtacgaatgcagctgtggctgagcgacccgcggaacgtg
gagaagctcatggacatgaagcggatggaaaagaaagcctacatgaagaggcgccacagc
tcaatcggtgagagtcattcgctggagagcggtctgtcaggaagtgacctcactcagggc
gccagcccccaaaacctctcccagcagcagcagcagcaacagcagcagccccagctgaag
aaaccccgtgtggtgctggctccagaagagaaggaagctctgaagagagcctaccagcag
aagccttacccctctcctaaaaccattgaggagttagcgagccagctcaacctcaaaacc
agcacggtcatcaactggttccacaactacagatcccgtattcggcgagagctctttatc
gaagagatccaggcggcggccggcgaaggcggatccccctcggcgcggcccgggaagtcc
ggtggcgaaggagacaacagctgcgatggcaccgagtccgacagcaccgcggagggacga
ccgagtggttctgaggaacgcaagggcctcctggagagccccagcctcagccacagagac
gaagacgctgaggccgagttccccagcgcctcgggcaccagcaggccacgaggaggcatc
atagacagcctgttcggcatccccgagtccgtatcctctgccgccgccactgccgctgct
accccctgccgaaacccaaaggacagcagtctgcgcaagaagaaagcagccaacctcaac
aacatcatccacaggctggagaaagcggcgaaccgcgacgagcctcacgaatgggagttc
tga
DBGET
integrated database retrieval system
