Labeo rohita (rohu): 127172078
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Entry
127172078 CDS
T09007
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00310
Lysine degradation
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127172078 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127172078 (setd1ba)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
127172078 (setd1ba)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127172078 (setd1ba)
HMT complexes
COMPASS/SET1 complex
127172078 (setd1ba)
COMPASS/SET1 complex (yeast)
127172078 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Nop14
Motif
Other DBs
NCBI-GeneID:
127172078
NCBI-ProteinID:
XP_050977101
LinkDB
All DBs
Position
10:complement(401386..426892)
Genome browser
AA seq
1851 aa
AA seq
DB search
MSRPGERNKLNEDHGRRQSSSLANGMENSHPICSSGEKRSHHWRSYKLIIDPALKKGSHK
LYRYDGQHFNVPNPGMPPVDIVRDPRIGRMWTKYKETDLPVPKFKIDECYIGRVPPKEVT
FAKLNDNVREGFLTDMCKKFGDIEEVEILYNPKNKKHLGIAKVVFGTVKAAKDAVQNLHN
TSVMGNIIHVELDPKGENRQRYFQRLINGSYTPLTLPVGGEEACEVSPRSLAEALLPLRR
LSEGSSSAVGGTATPGGTNTPLSLDTAYSSLRQDTPQSQGTPHTPRPSGTPFSQDSSYSS
RQGTPAFQSNRAESSGGYKSRRHETKFQDAYNRRPERHYVHGTGGAAHRGNAEQPPSFKQ
HQPPEPPSPAFAHTPPPPNFKNAFSPYQPPMPPVYPHTEPSFHQPVQREVDYRRQPQAPP
PPSTDFMPVRDRPATPPIPEPPPPVPETQPATPPPSTPEPCQSLGTPTQDSERNSLDSRI
EMLLKPYLNERGDSDAEVRMDGSPISSSSSQLSPIPPQRPSRPSSTGLEDISPTPLPDSD
DDEPVRGTASLLTNSRAMSPSNMHSKGGVGEPRTPVDKMDTGHQSSGEDMEISDDEMPGT
PIASGDCAKSIVVNSAMSPMQTIPMPPPGFPPLPPPQAGFPLPPPPIPTVPHLAGPPGVA
PHPMLHLAHYPPAIMPIMQMDLMSSLPQWGSVHMSFQMQTQMLSRMAQSQRPYPYPHFIS
GAAASAGAAAAAAAAMQFGGPYPHLSMVGAPTGQVAHGQPWPMPNMPKFNPAVPPPGYEP
QKEDPHKATVDGVLLVILKELKAIMKRDLNRKMVEVVAFRAFDEWWDKQERSAKATLTPV
KTGEGKDEEKERAKPKETISSSLLENWNKVEGLGFEGMGLSIGLRGAIRLPSFKVKRKQP
PEPTSTIDNKRVRPSTPVDDELEDEESERTDLRTDGSRTDGGGSSAKRRPARPLELDSEG
EEEEETSGKEESSLSDHEEEPVEEASVRLSSGTDMEDEEDDEKKSESDSSESESSDSSDD
ESSSSSSSSKSDSDSSGSDSSSDYESSSGEEEEEEEEQAVGMEDEDEDDAQTSSTSSSSS
SSSSEDEDVEVKAPSTPTGPPPEEEPNELGRLDALDEAEIDQKHTAVSSIKSEDDVWPPS
PKGLPADEPDIELPVSIPVPKAEPALEDVSSLRPPTPTGSFADSDQDTRPKIPAEDVPRT
PGRDGPVSLESEAAIPCSLPTPSMHLPLPPNHALEARSLLPPPEALPDMPVRGRLPTEED
IPRTPGRDLMDRPRGLGKSQSTDTVPVTPGSDTPLTGNSLSSPHILGSPFSYPAQSPVLS
AGIPRTPGRDLTFTPAFPDSAALSAGLPIHRKASSESLEEKSLFKEPLLSASPQASLPNN
AVSSPFPGPPLPAASLPEPPLPPQASSPTSVETSSPPAPKDLPVPMIDVPVPLDATPSKR
KPGRPKSKKTPVASPPDSEEPLTPTVDSLPPDLPVNDLDLYPDHPPETFKVEDGDSTALE
EEEPQTQTVLPEVDDRMFYVEEPIQKTRRQRRGWQELLLSMHSPVTSPRRPSFLPRSDFE
EMTILYDIWNDGIDEEDIRYLKVTYDKMLQQDNGNDWLNDTLWVHHPPTNMGSTSGLKKK
RKEDGIRDHVTGCARSEGYYKIDKKDKMKYLNSSRLQSEEPDVDTQGKSIPAQPQASTRA
GSERRSEQRRLLSSFSCDSDLLKFNQLKFRKKKIRFCKSHIHDWGLFAMEPIAADEMVIE
YVGQNIRQVIADMREKRYEEEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAK
VITVESQKKIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacctggagaaagaaataagctaaatgaagatcacggtagaagacagagttca
agtttggcgaacggaatggagaacagccatcctatctgcagttcgggagagaaacgaagt
catcattggagaagttacaagttgattattgacccagcgttgaaaaagggttcgcacaaa
ctgtaccgctacgatggacagcacttcaacgtgccgaaccccggaatgccacccgtggac
atcgtccgagacccgagaatcggtcgtatgtggactaagtacaaggagaccgatctcccg
gttcctaaatttaagatcgatgagtgttacatcggtcgtgtgcctccgaaggaggtcacg
ttcgccaagctcaacgacaacgtccgagagggcttcctcaccgacatgtgcaagaagttc
ggcgacatcgaggaggtggaaattttatacaatccgaagaacaaaaaacatctcggaata
gctaaagttgttttcggaaccgtcaaggcggcgaaggatgctgtgcagaacttgcacaac
acgtctgtcatgggcaacatcatccacgtggagctggaccctaaaggtgaaaatcgccag
aggtacttccagcgtctgatcaatggaagttacactccgctcactcttccagttggtggt
gaagaggcctgtgaagtttctccacgaagcttggccgaagccctgctgcctttgcgaaga
ctgtccgaaggcagttcttctgcagtcggtggcacagccacgccgggcggcaccaacacg
cccttgtccctggatacggcctactccagcctaaggcaggatacgccacagtcccagggt
actccgcacaccccgcgcccatcaggcaccccgttctctcaggactccagctactccagc
aggcaaggcactccggcgttccagtcgaaccgtgctgaatcctcaggaggctacaagtcg
agacggcatgaaaccaaattccaggacgcctacaaccgaagaccggaaaggcactacgtc
cacggtacgggaggagcggcgcatcgtggcaatgcagagcaaccgcccagtttcaagcaa
catcagccacctgagccgccgtcacccgcttttgcacacacgccaccgccaccgaatttc
aaaaatgctttctctccttatcagcccccaatgcccccagtctaccctcacacagagcct
tccttccaccagcctgttcagcgggaagtggattataggagacagcctcaagctccgccg
cctccgagcactgacttcatgcctgtcagagacaggcctgcaacgccgccgatccctgaa
ccgccgccccctgtgccagaaacccaaccagctacgcctcccccctccacgccggagccc
tgccagtcgctgggcaccccgacccaggactccgagcgcaacagcttggactcgcgcatt
gaaatgcttctgaagccctacctgaatgagcgcggagactcggacgctgaggtgcgcatg
gacgggagtccgatctcctcctcgtcctctcagctctctcctattccgcctcagcggccg
tcgcggccttcaagcacaggcttggaggacatcagcccaacgccgcttcctgattcggac
gatgacgagcctgttcgtggtactgcttccctgttgacaaactctagggccatgtcgccc
tccaacatgcacagtaaaggcggggtgggagaaccacggacgcccgttgacaaaatggac
acgggccatcagtcgtcaggtgaagacatggagatttctgacgatgagatgcctggcaca
ccgatcgctagcggggactgtgccaaaagcattgtggtcaactctgcgatgtctccgatg
cagaccattcccatgcccccgccagggttccccccactgccccctccacaggctggcttc
cccctgccaccgccgcctattccaaccgttccgcacctggccggcccacctggcgttgcc
ccccatccgatgcttcacctggcacattatccacctgccataatgcccattatgcagatg
gacctgatgagctccttaccacagtggggcagcgttcacatgtccttccagatgcagact
cagatgttaagtcgcatggcgcagagccagcggccttacccttaccctcacttcatcagc
ggggctgctgcaagcgccggcgctgctgctgctgccgccgctgccatgcagtttgggggc
ccgtatccacatctgtccatggttggtgcgcctacaggccaagtggctcacgggcaaccc
tggcccatgcccaacatgcccaagttcaaccctgctgttccccctccaggctatgagccc
caaaaggaagacccgcacaaagcaactgtggatggagtgcttctggttattctcaaggag
ctgaaggccatcatgaaaagagatcttaaccgcaagatggtggaggtggtggccttcaga
gcgtttgatgagtggtgggacaaacaggagcgttcggctaaggctacgcttacacctgtg
aagacaggtgagggcaaagacgaggaaaaagaacgggccaaacccaaagagactatatcc
tcaagcttactggaaaactggaacaaggttgaaggtctgggctttgagggaatgggcctc
agcataggcttgcgcggtgccattcggttaccatccttcaaggttaagaggaaacagccc
cctgagccgacatctaccattgacaacaagagagtgcgaccatccacacctgtcgatgat
gagctggaagatgaagaatcagaaagaacagatcttcgcacggatggatccagaacggat
ggcggtggttcttctgccaagagaaggccagccagacctctggagctggacagcgaaggt
gaggaggaggaggaaacctctgggaaagaggagtcatcgctttcagaccatgaagaggag
ccagtggaagaagcctctgtgaggttgtcctctggcacggatatggaggacgaggaagat
gatgaaaagaagagcgaatcagactccagcgagagtgaatcatctgactcatcagatgac
gagtcttctagctcatcgtcctcctccaaatctgattctgattcatctgggagcgacagc
tcgtctgactacgaatcgagttcaggggaggaagaggaggaagaagaagagcaggcagtg
ggaatggaggatgaagatgaagacgatgcacaaacctcatcgacgtcctcatcttcctca
tcctcgtcttctgaagacgaagatgttgaggtaaaagctcccagtacccccacaggacca
ccaccagaagaggaaccaaacgagctgggcaggctggacgcgttagatgaggcagagatc
gatcagaaacatactgcggtgagctcaatcaagtctgaagacgacgtgtggcctccatca
cccaaaggattgccagctgatgaacctgacattgagttgccagtcagtattccagtgccc
aaagctgaacctgccctggaggatgtcagtagcttgcggccacccaccccaacaggttcg
tttgccgacagcgatcaggacacccgaccaaagatccctgcagaagacgttccccgtacc
cccggtcgtgatggccctgtttccctagaatcagaggccgcgatcccttgctctcttcct
acgccctcaatgcaccttcctcttccccccaatcatgcccttgaagctcgatcccttctg
ccgcctcctgaagctttgccggatatgcctgtccgtgggcggttgcctacggaagaggac
atcccacgcacaccggggagagatcttatggacagaccccggggcttgggcaagtctcag
agcaccgatacggttcccgttacaccaggtagcgacacgccgctaacaggtaacagcttg
agctcgccgcatatcctcggcagccctttctcttaccccgctcaatcccctgtcctcagc
gctggtatccctcggactccgggtagagatcttactttcaccccagctttccctgactct
gctgctttatctgcaggccttcccattcataggaaggcctcgtcggagagcttggaggag
aagtctctctttaaagagcctctactcagcgcctctccccaggccagcctacctaacaat
gcagtttcttccccattccctggtcctccccttcctgctgcttcacttccggagccacct
ctgcctccccaagcctcctctcccacttctgtagagacttcctctcctcctgctccaaaa
gacctgcctgttccaatgatagatgttcctgtgcccttagatgctactccaagcaagagg
aaaccgggacgtcccaagtctaaaaagacacctgtggcgagccctccagattctgaagag
cctctaactccaacggtggactctttacctccagatctaccagtaaacgacctggacctg
tacccagaccaccctccagagaccttcaaagtagaagatggtgattccacagccttggag
gaagaggaacctcaaacccagacggtcttacctgaggtggacgacaggatgttttacgtt
gaggaacctattcagaagacgcgccgacagaggcggggctggcaggagttgttgttgtcc
atgcattcccctgtgacatcaccacgccgccccagcttcctaccccgctcagactttgag
gagatgaccatcttatatgacatctggaatgacggcattgatgaggaggacatccgctac
cttaaggtcacttacgacaagatgcttcagcaggacaatggcaacgactggctcaacgac
accctctgggtccaccatcctcctaccaacatgggcagcacatcaggcctgaagaagaag
aggaaagaggatggtatacgcgaccatgtcaccggctgtgcccgcagcgagggctactac
aaaatcgacaagaaagacaaaatgaagtacctaaacagctcacgcctgcagtctgaagag
cctgatgtggacactcaggggaagagtattccagcacagccccaagcgtccactagggca
ggatcagagcggcggtctgaacagcgccgcctgctgtcgtccttcagctgcgacagtgac
ctccttaagttcaaccagctcaagtttcgtaaaaagaagatccgtttctgtaaaagtcac
attcacgactggggattgtttgccatggaacctattgctgctgatgagatggttatcgaa
tatgtcggccagaatattcgacaggttattgcagacatgcgagagaagcgctatgaggaa
gagggcatcggcagtagctacatgttccgtgtggatcatgataccattatagacgcaacc
aaatgtggcaacttcgcccgcttcatcaatcacagttgcaatccaaactgttatgccaag
gtcatcactgtggagtcgcagaaaaagatcgtcatctactcccggcagccaataaatgtc
aacgaggagatcacctacgactacaagttccccatcgaggacgagaagataccgtgcctc
tgtggtgcagaaaactgcagaggaaccttaaactaa
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integrated database retrieval system
