KEGG   Labeo rohita (rohu): 127175780
Entry
127175780         CDS       T09007                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127175780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lroh03041]
    127175780
Spliceosome [BR:lroh03041]
 Complex B
  Other components
   Prp19-related factors
    127175780
 Complex C
    127175780
SSDB
Motif
Pfam: STL11_N RRM_1 zf_CCCH_4 Torus zf-CCCH_2 RRM_occluded zf-CCCH zf-CCCH_4 RRM_3
Other DBs
NCBI-GeneID: 127175780
NCBI-ProteinID: XP_050982995
LinkDB
Position
14:complement(24391076..24400920)
AA seq 422 aa
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGMSVKDDMPRSDVNKEYYTQN
MEREIQNSDGTRPVGMLGKAQNPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASSMPRLDPPEDKSITTLYIGGLG
ENVTDSELRNNFYQYGEIRTITLVQRQQCAFIQFATRQGAELAAEKTFNKLIINGRRLAV
KWGRSQAAKGKDGKDGFDEMGTGLEPVPGLPTTLPPPPALEQEAPANYFNLDPSSSPAVM
NISLPPPPGLPNPPPPGFGPPMFHPMGPPPPPPMALRPPGHIHYPSQDPQRMGAHAAVRH
SD
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcgacgtccctgggctcaaacacctacaacagacagaactgggaagattcggacttc
cctattctctgtcaaacatgtcttggggaaaatccatacattcgcatgaccaaagaaaag
tatggcaaggaatgcaagatatgtgcgcgtccctttactgttttccgctggtgtcctggt
gtacggatgcgctttaagaagaccgaggtgtgtcagacctgcagtaagatgaagaacgtc
tgtcagacgtgtttgttggacctggagtacggtcttccaatccaggtcagagacacggga
atgtccgttaaagacgacatgccgaggtctgacgtgaacaaggaatattacactcagaac
atggagagagagatccagaactcagatggtacgagaccggtggggatgctgggtaaagca
cagaaccccagtgacatgctgctgaagctggcgcgaacaacgccgtactacaaacgtaac
agacctcacatctgctccttctgggtgaaaggagaatgtaagagaggagaggagtgtccc
tacaggcatgagaagcccacagaccctgatgatcctctggccgatcagaacattaaagat
cgttattatggcattaacgacccggtggcggataaacttctgaagagagcatccagcatg
cctcgactggacccgcctgaggacaagtccatcacaacattatacattgggggactggga
gaaaacgtcactgactctgagctcaggaataatttctaccagtacggtgagatccgtacg
atcacgttggttcagaggcagcagtgcgcgttcattcagtttgccacgcgacagggagca
gagctcgcagcagaaaaaaccttcaataagctcatcattaatggccgcagactggcggtg
aagtggggccgatcgcaggccgctaaagggaaggatggcaaggacgggttcgatgagatg
ggcacgggactagaaccagtaccgggtctccctacaactctaccaccacctcctgctctg
gagcaggaagcacctgctaactacttcaacctggaccccagcagctctcctgcagtcatg
aacatcagtctgccacctccacccggactcccaaacccaccgccaccaggttttggacct
cccatgttccatcccatgggtcctcctccacctcctccgatggctttgagacctccaggc
cacattcattatccttcccaggatcctcagcgcatgggagcgcatgctgctgttcgccac
agcgactga

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