Labeo rohita (rohu): 127177999
Help
Entry
127177999 CDS
T09007
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127177999 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127177999 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Alanine_zipper
DUF4047
DUF6061
Death
Motif
Other DBs
NCBI-GeneID:
127177999
NCBI-ProteinID:
XP_050986567
LinkDB
All DBs
Position
2:24379030..24449323
Genome browser
AA seq
1593 aa
AA seq
DB search
MSLFSCLLLWTLWAACSHGAMDECIDETHRPQRCMPEFVNAAFNATVVATNTCGSPPEEY
CVQTGVTGVTKSCHICDAGDPRHHHGAVYLTDYNNQADTTWWQSQTMLAGIQYPNSINLT
LHLGKAFDITYVRLKFHTSRPESFAIYKRTSERGPWIPFQYYSGSCEKTYSKTNRGFIRT
GEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIKVTLNRL
NTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEHSKLVCNCKHNTEGPDC
NVCKPFYNDRPWRRATAENPNECLPCKCNGKSAECYFDPELYRATGHGGHCRNCADNTDG
PNCERCLDNYYRNPSSQRCLSCSCNPVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHT
LTAAGCRPCSCNPAGSTQECDVQNGRCQCKENVDGFNCDRCKLGYFNLDPQNPQGCTPCF
CFQHSTVCESADGYHIHTITSTFDRDDEGWKGQQRDSSSVPVQWSPTSREISLISEDYFP
IYFVAPEKFLGDQLLSYGQNLTLNFRIQRHDARLSAEDVVLEGAGHRVAVPLIAQGNSYP
GEETQTFVFRLHDTTDYPWRPTMKHIDFQKLLHNLTSVMIRGTYSARSAGYLDNVSLVTA
RRGPGTPARWVEKCTCPQGYLGQHCEQCDLGYRRSRPELGLFSSCEPCNCNGHSDTCDPV
TGMCNCQHNTAGMSCERCKDGFYGDSTVGSSSDCKPCPCPEGATCAMVPKTKEVVCTNCP
TGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNNIDPNAVGNCNRESGECLKCIYNT
AGVFCDRCKEGFYGDARAANVADKCKPCSCSPYGTVDRKTTCSQVTGQCQCLPHVINRDC
SACEPGFFNLQSGKGCERCNCNPIGSTNGQCDISSGQCECQPGVTGQHCERCEVNFFGFS
SSGCKPCDCDPEGSELAQCKEDGRCQCRPGFVGARCDMCEENYFYNRSTPGCQQCPNCYS
LVRDKVNQQRQKLHDLQNLIDNLDNTENTVSDKAFEDRLKEAEKTIMDLLEEAQASKEVD
KGLLDRLNNINKTLNNQWNRLQNIKNTVDNTGTQADRARNRVRDAENLISTAREELDKAK
EAISKVDIKIPTTSGDPNNMTLLAEEARKLSEKHKADADQIEKIAKDANDTSTKAYNMLK
KALDGENKTSSDIDELNKKYADAKDLVRTLEKQAAKVHAEAEEAGNKALKIYANLTSLPS
IDTKTLEDEANKIKKEASDLDKLIDKTEKEYNDLREDLRGKETEVRKLLEKGKTEQQTAD
QLLARADAAKALAEEAAKKGKSTFQEAQDILNNLRDFDKRVNDNKTAAEDAMRRIPEINA
TINEANEKTRRAEAALGNAAADAKEAKAKAEEAEKIANDVQKGSAKTKVDAEKAFEDTMK
LDGEVNNMMDQLTAAEKELEKKKAEADADMMMAAMASDNAKEAEGNARKAKNAVRTVLNT
INELLNQLGNIDKVDLSKLNQIDKALKEAKDKMAGSELDRKLKELNDIAKSQEDMITDYD
RQIKEIREDIVNLNDIKSTLPEGCFNTPSLERP
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttttagctgtttgttattatggactttgtgggcagcgtgcagccatggagcg
atggatgaatgtatagacgagacccatcggcctcagcgctgcatgccagagtttgttaac
gccgctttcaatgcaaccgtagtggccaccaacacttgcggctcgccgcctgaagaatac
tgtgtacagaccggggtgacgggggtcactaaatcatgccacatttgcgacgccggagac
cccagacaccaccacggcgctgtttatctcaccgattacaacaaccaagcggataccacc
tggtggcaaagtcagactatgttagcgggcatccagtacccgaactccatcaacctgacc
cttcacctgggcaaggctttcgacatcacctatgtgcgtctgaagtttcacaccagccgt
cctgagagctttgccatctataagcgcactagtgaacgcgggccctggattcccttccag
tactacagcggctcctgcgagaagacctacagcaagaccaaccgcggcttcatccgcacc
ggtgaggacgagcagcaggctctgtgcacagatgagtttagcgacatctcaccgctcacc
ggaggaaacgtggccttctctacgcttgaggggcgacccagcgcatataactttgataac
agccctgtactgcaggattgggtgactgccacggacatcaaagtgaccctgaacagactg
aacactttcggagatgaagttttcaacgatcccaaagttctcaaatcctactactatgct
atctctgacttcgctgtgggaggaaggtgcaagtgtaatgggcatgccagcgagtgtgtg
aagaatgagcacagcaagctggtgtgtaactgcaaacacaacacagagggaccagattgc
aacgtctgcaagcccttctacaatgaccgtccttggaggagagccacagctgaaaacccc
aacgagtgcctgccttgtaaatgtaatggaaagagtgctgaatgttacttcgaccctgag
ctgtatcgtgccactggtcatggaggtcactgccgcaactgtgccgacaatacggatggg
ccgaactgtgagcgatgcctggacaactactacagaaacccctccagccagcgctgtctc
tcctgcagctgcaaccctgttggttctctcagtacccagtgtgacaacactggcagatgt
agctgtaagcctggagtgatgggagataagtgtgacagatgccagcctggataccacaca
ctgactgccgcaggctgcagaccctgctcttgtaatccagccggaagcacgcaggagtgt
gatgtccagaacggacgctgccaatgcaaggaaaacgtggatggattcaactgtgacagg
tgtaaactgggctactttaatctggacccccagaatcctcagggatgtactccatgcttc
tgcttccagcattccactgtgtgtgaaagtgctgatggctaccacatacacacaatcacc
tccaccttcgacagagatgatgagggctggaagggacagcagagagacagctctagtgtt
cccgtccaatggtcacccacctctcgagagatctcgctcatctctgaagactacttccct
atctactttgtcgctccagagaaatttcttggtgatcagctgctgagctatggtcagaac
ctaacgctgaacttcaggattcagaggcatgatgcacgtctgtcagcagaggatgttgtg
ctggaaggggctgggcatcgtgtcgctgtgccacttattgcccagggcaattcctaccca
ggagaggagacgcaaacctttgtgtttagactccatgatactactgactatccatggaga
cccaccatgaaacacattgacttccagaaacttttgcacaatctgacttcggttatgatt
cgtggaacctacagtgcaagaagtgctggttatttagacaacgtgtcccttgtcactgcc
cgccgtggccctggtactccagctcgttgggttgagaagtgtacatgtcctcagggttac
ttgggacagcactgtgagcagtgtgatctgggatataggaggagccgacccgagctgggc
ctctttagcagttgcgagccctgcaactgcaacggacacagtgacacttgtgaccctgtg
acaggaatgtgtaactgccagcacaacactgccggcatgagctgcgagaggtgtaaggat
ggattctatggtgactctacggtcggctcttcttcagactgtaaaccctgtccctgccct
gaaggtgccacgtgtgccatggtgcccaagaccaaagaggtggtctgtacaaactgccct
actggaaccacaggtaagagatgtgaactatgtgacgatggcttcttcggagaccctctt
ggtgaaaaaggtccagtcagagcgtgccgtgcctgcagctgcaataacaacatcgacccc
aatgctgtgggcaactgcaatcgagagtcaggcgaatgcctcaaatgtatctacaacaca
gctggagttttctgtgaccgttgcaaagaaggattctacggtgatgcccgtgctgcaaat
gtagctgacaaatgcaaaccgtgctcgtgctctccatacggtacagtggacaggaagacg
acttgctctcaggtgacgggtcagtgtcaatgtcttccccacgtcattaacagagactgc
agtgcgtgtgagcccggtttcttcaacctacagagcggcaagggctgtgaacggtgcaac
tgtaaccctattggctccacaaacggccagtgtgatatctctagcggccaatgcgagtgt
cagcctggggtcacaggtcaacactgtgagcgctgtgaggtcaacttctttggattcagt
tcgtcaggatgcaaaccttgtgactgtgacccagaaggctctgagttggctcaatgcaag
gaagatggacgttgtcagtgtcgcccaggctttgtgggagctcgctgtgatatgtgtgag
gagaactacttctacaaccgctccacaccaggttgccagcagtgtcccaactgttacagc
ctggtcagagacaaggtgaaccagcagagacagaagcttcatgacctacaaaatctgatt
gataatctggacaacactgagaatacagtgagcgacaaggcctttgaggacagactgaag
gaggcagagaaaactataatggacttactggaagaggctcaggctagcaaagaagtggat
aaagggcttttggaccgtctaaacaacatcaacaagaccctgaacaaccagtggaaccga
ctgcagaacatcaagaacacagtggacaacacaggaacgcaggcagatcgagcacgtaac
cgagtccgtgacgcagagaacctgatcagcactgctagagaagagctggacaaagccaaa
gaggccatcagtaaagtggacattaaaatacccacaacctccggagatccaaacaatatg
acacttctggcagaggaggcccgcaaactgtctgaaaaacataaagcagatgcagatcag
attgagaagatcgcgaaggacgccaatgacacttccactaaggcctacaatatgctgaag
aaggcgctcgatggcgagaacaagacaagcagcgatattgatgagctcaacaagaaatat
gctgacgcaaaggatctagtcaggaccctggagaaacaggctgctaaagtacatgctgaa
gcagaggaggcaggaaacaaagctctgaagatctacgctaacctgaccagcttgccctca
atcgacaccaaaacattagaggacgaggccaataagattaagaaggaggcatcggatctg
gacaaactgattgacaagactgagaaggagtacaatgacctgagagaagacctgaggggc
aaagagacagaggtccgcaaactattggaaaaaggaaagactgagcaacagacggctgat
cagttgttggcacgtgcagacgcagcaaaggctttggctgaggaggcagcaaaaaaaggc
aaatcgaccttccaagaggcccaggacatactgaacaacctcagagattttgacaagaga
gtgaatgacaacaaaactgctgctgaggatgccatgaggcgaatcccagaaatcaacgcg
acaatcaatgaagccaatgagaagacccgacgggccgaggcggctttaggcaacgcagct
gctgatgctaaagaagctaaggcgaaggcagaggaagctgagaaaattgctaatgatgtg
cagaagggttcggcaaagacaaaggttgatgcagaaaaggcttttgaagacaccatgaaa
ctggatggagaggtgaacaacatgatggaccagctcacagccgctgagaaagagctcgag
aagaagaaagctgaggcggacgccgacatgatgatggcggccatggcatctgataatgct
aaagaagctgaaggcaatgccagaaaagccaaaaatgctgtcaggacagtgctgaacaca
atcaatgaattattaaaccagctcggcaacatcgataaggtggatctgagcaagctgaat
cagatcgataaagccctaaaagaggccaaggacaagatggcgggaagtgagctggacagg
aagctgaaagagctgaacgacatcgccaagagccaggaggacatgatcaccgactacgac
cgccagattaaggagatccgagaggacatcgtgaacctgaacgacatcaagagcactctg
ccagaaggctgcttcaacactccgtctctagagcggccttaa
DBGET
integrated database retrieval system
