Labeo rohita (rohu): 127178946
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Entry
127178946 CDS
T09007
Symbol
phc1
Name
(RefSeq) LOW QUALITY PROTEIN: polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127178946 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127178946 (phc1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
127178946 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
zf-FCS
Motif
Other DBs
NCBI-GeneID:
127178946
NCBI-ProteinID:
XP_050988097
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Position
16:complement(14525785..14537580)
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AA seq
893 aa
AA seq
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MEAGEDQTNSSSANSSAASGGNSRPPQIAQMSLYERQAVQALQALQRQPNAAQYFQQLML
QQHINSAQLNLAAVQQATLAASRQSSSPSNSVSQATSSAQCTVNLSTAAGGGTMTNPRPV
GPATSATSPALNQSVLLGGNSGGQGQMYLRVNRSLRAPLTPQLIFMHGTPATAAVSTVAQ
QQPQQQQQQQQQQETAPTSSSNQSDNDQVQNLAMRCVSTPRVAAVKTEFADRKETSGSFP
LNQQTQTQQQFGQSAQQIQPQTQALANTKLQNCSNAANPSMPGLNVKGANQSAVTPQQAG
GSSNPPSSSPSPSLPLSQILLSQSGLCQARGVPAAAATVTHILVPTSNVPTSSQGYPMGT
VATKSNMTAQTLVVQPLQQTGANLSTEKLGHGTGHVPIQPKTAQGHRLPVQMPPRHPPPI
LPAPPNNGQATGGHHPPHVPVQLVGARQSTLGNSQALAVAQARTCCAQQDATAVVPINNS
GGNVVTMVTAVETGGAGMCLKTAQSALPVSQMQTNQSSALSQGNPASVTHSMDGQNNSGD
SVFIQSGTAQTKPGIGPLKRKSESDLPHEMSVEAVNASPSLQDSAPPLSPAPSLDTVPEM
AFSSPPTLSLSLPLPRGGGQGDRAPVPQAVVKPQVLTHLIEGFVIQEGAEPFPVAGPLKE
LPVAVPPILHPENVRSDKLKCEYCLRFAPANQFRRSKRFCSKTCAKRYNVSCSNHFRVSR
GLEGVERPSGGPVVQDVIARRRGPRRSSSEIACAKITGRHLPVKCRSESSRSEDISSCEG
EEEEDFLSLSPSSSFSCPRPTHCGPQLDDTAPSSLPVDENHFLSGNPAHWSVEEVCQFIS
SLQGCEDLASQFLSQEIDGQALMLLKEEHLMSTMNIKLGPALKICASINSLKD
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaggagaagaccagaccaactccagctcagccaatagcagcgcagcatcaggg
ggaaactcccgcccccctcagatagctcaaatgtctctgtatgaaaggcaagccgtgcag
gcactgcaggcattacagaggcagcccaatgcagctcagtactttcagcagctgatgctg
cagcagcacatcaacagcgctcaactcaacctggctgctgtgcaacaggcaactcttgca
gcgagtcgtcagtccagttctcccagtaacagtgtctctcaagctacaagttcagcacaa
tgcacagtcaacttaagtaccgcagctggtggagggaccatgacaaacccccgtccagtg
ggacctgccacctctgcaacatcaccagcccttaaccagtcagttttgttaggtggaaac
tcgggtggacagggtcagatgtacctgagagtaaaccgctctctcagggcacctctcacc
cctcagctcattttcatgcatggtactcccgcgacagctgctgtgtcaacggttgcccaa
cagcagccccagcagcagcagcagcagcagcaacaacaggaaacggctcccacatcctca
agtaaccagtcagacaatgatcaggtacagaatttggcaatgcgttgcgtttccactcca
agggtggctgctgtgaagacagagtttgcagacaggaaggagacaagtggctcattccca
cttaaccagcaaactcagactcagcagcagtttggtcagtcagcccagcagatccaacca
cagactcaagcgctcgccaacaccaaactgcaaaactgctctaatgccgctaatcccagc
atgcctggcctcaacgtgaagggcgctaaccaatcggctgtcaccccacagcaagcagga
ggttcctccaatcctccgtcctcctcgccttccccctcgctccctctctcccagatcctc
ctttctcaatctggcttgtgccaagctcgaggagtaccagctgctgcggccaccgttacc
cacatcctagtgcccacctccaatgttcctacatcttctcaaggctatccgatgggcacg
gtggcaaccaaatccaacatgactgcccagacattagtggtgcagccactccagcagaca
ggggcaaatttgagcacagaaaaactgggtcatggaacgggacatgtgcccattcagcct
aaaacagctcaggggcatcggctgccggtgcagatgccccctcgccaccctcctcctatt
ctcccagcaccacccaacaatggccaagccacgggaggccatcaccctcctcacgtcccg
gttcagctggttggagcgaggcagagcacactaggaaactcccaggctttagcagtggcc
caggctcggacctgttgcgcccagcaggacgccacggctgtcgtgcccatcaataactcc
ggtggcaatgttgttactatggtgactgctgtggaaacaggcggagccggcatgtgcctt
aaaacagcccaaagtgccctcccagtgtctcagatgcaaaccaatcagagctcagcgctg
agtcagggtaatcctgcttcggtcacacactcgatggatggacagaataactctggagat
tctgtttttattcagtctggaacagctcagacgaagcctgggattggtccattgaaaaga
aaatctgaatcagatttaccccatgagatgtcagttgaagccgtaaatgcaagtccgtca
ctgcaagactccgctcctcctctctcaccagctccctcattagatacagtcccagagatg
gcgttctcctctcctcctactctctctctttctctccctctccctcgtggaggagggcag
ggtgatcgagcacctgtcccacaggctgtggtcaaacctcaggttctcactcacctcatt
gagggctttgttatccaggagggagctgaacctttccctgtggctgggccattgaaagaa
cttcctgtggctgttccacctatcctacatccagagaatgtccgctctgataagttaaag
tgtgaatactgtctaagatttgcaccggccaaccagttcagacgatccaagcgcttctgt
tccaaaacctgtgcaaagaggtacaatgtcagctgcagtaaccacttccgtgtcagcagg
ggtcttgagggtgtagaacggccatcagggggccctgttgtacaggatgttattgctaga
cgcagaggtcctcgcagaagcagttctgagatcgcctgtgctaaaataacaggcaggcat
cttcctgtaaagtgtcgttcagaatctagtcgttctgaggacatctccagctgtgagggt
gaggaagaggaagacttcttgtcactctctcccagctcatccttctcatgcccgagacca
acccactgtggtcctcagttggatgacacagcaccaagtagcctcccagtggatgagaac
cacttcttatctggcaacccggctcactggagtgtggaggaagtttgtcagttcatttct
tctcttcaaggttgtgaggacctggcatcccagttcctttcacaggagattgatgggcaa
gcgctcatgcttcttaaggaagagcatcttatgtccaccatgaacatcaaactcggtcct
gcccttaaaatctgtgcttctatcaacagcctgaaggattga
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