Labeo rohita (rohu): 127181210
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Entry
127181210 CDS
T09007
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127181210 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127181210 (exosc5)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127181210 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
127181210
NCBI-ProteinID:
XP_050991750
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All DBs
Position
18:18727922..18733653
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AA seq
233 aa
AA seq
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MTHISATRGLCMRTMMDLDQSCSVLREYGSEQSLLSKPDGSSTFVQGDTSILAGVYGPAE
VKVSKEIYDRATVEVLIQPKMGLPGVRERAREQCVRETCEAAILLTLHPRSSVTLILQVI
HDDGSLLSCCLNAACMALMDAGLPMSHLFCGVTCAISKEGQIITDPTARQEKESRALLTF
AIDSVERNVLMSSTTGSFSVQELQQCIAISQKASEQIFQFYRDSVKRRYSKIK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatataagcgcgacgagaggattgtgcatgaggaccatgatggacttagatcaa
agttgttcagttttaagagaatatggaagtgagcagagtttattgtccaaacctgacgga
tcttctacatttgttcaaggtgatactagtatcctggctggagtttatggaccagctgag
gttaaagtcagcaaggaaatctatgatcgagctactgtagaggtgcttatccagcccaaa
atggggcttccaggagtccgagagcgcgcgagagagcagtgtgtgcgtgagacatgcgag
gctgctattctgttgacgcttcatcctcgctcctctgtcacactcatcctgcaggtcatc
cacgatgacggctctcttctgtcgtgctgcctgaacgccgcctgtatggctctaatggat
gccgggctgcccatgagccaccttttttgtggtgtgacctgcgctattagcaaagagggc
cagataatcactgatcccacagctcggcaggaaaaggaaagccgagcgttgttaacattt
gctattgatagcgtcgagcgcaatgttttgatgtcgtcaactacaggctctttttcagtc
caggagctgcagcagtgcatcgcaatcagtcaaaaggcttctgaacagatttttcagttt
tatagggattctgtcaaacggcgatattcaaagataaaataa
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