Labeo rohita (rohu): 127182071
Help
Entry
127182071 CDS
T09007
Name
(RefSeq) tripartite motif-containing protein 16
Organism
lroh
Labeo rohita (rohu)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
DDE_Tnp_1_7
DUF745
4HB_MCP_1
zf-UBP_var
MscS_porin
Motif
Other DBs
NCBI-GeneID:
127182071
NCBI-ProteinID:
XP_050993133
LinkDB
All DBs
Position
19:4552886..4558710
Genome browser
AA seq
563 aa
AA seq
DB search
MAEVRFSKDHFTCPVCLDLLKDPVAIPCGHSYCKSCIKTFWNQEDKKRVYSCPECRQTFK
PRPALNKNIMLAEEVKKLRKTELQTDVPAGPGDVECDVCTGRKHKAVKFCLVCLNSFCQN
HLEQHEDLFKEKRHNLMDATGERQKMICSKHKKPLDIFCRTDQQCICVLCIVDEHTKHKT
VSNAAERGDKQKLVNEMLEKYQQQIHDGEMKLQELKKALEDHKCSAQTAVEDSERIFNEL
ISSIERRRSEVTQIIRDREKTVVSQTEALLKRLKQDINNLRRGKSELEQLAKTDNHTHFL
QCFPSLPVPPGSPKVPSISDGSLDVVGKSVSQLRQKLEDFCKEEIEKLSGRVTCIQIIPT
PEYESRKHFLQYYIQFNLDPNTVHKHLSLSERNRMVRYTDTLREYPDHPDRFSYWWQVLC
RESVSGRCYWEVEWSGIGNVDVCISVSYKSINRKGWGDKSKFGSNDQSWCLICSPSSYTF
CQNNKQTKLSVVSSSRRIGVYVDYNIGILSFYSISETMSMNLIHRVQTTFTQPLCPGFWI
NLSVGDRVFGSPKHPTLKLCDKI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtcaggttttctaaggaccattttacgtgtccagtgtgtctggatctactg
aaggatccagtggccatcccctgtggacacagttactgtaagagctgcattaaaacattc
tggaatcaggaagataagaagagagtctacagctgccctgaatgcagacagacctttaag
ccaagacctgctttaaataaaaacatcatgcttgctgaagaggtgaagaaactgaggaag
actgaactccaaactgatgttcctgctggacctggagatgtggagtgtgacgtctgtact
ggaagaaaacacaaagctgtgaagttctgtttggtgtgtctgaactctttctgccaaaat
caccttgaacaacatgaggatctcttcaaggaaaagagacataatctaatggatgccact
ggagaacgtcagaagatgatctgcagtaaacataagaaaccactggacattttctgccgc
actgatcagcaatgtatttgcgtgctctgtatagtggatgaacacacaaaacataaaacc
gtctcaaatgcagcagagaggggagataaacagaaacttgtcaatgagatgctggaaaaa
taccagcagcaaatccatgacggagaaatgaagcttcaggagctgaaaaaggctttggag
gatcataagtgctctgcacagacagcagtggaggacagtgagaggatctttaatgaactc
atcagctccattgagagaagacgctctgaggtcacacagatcatcagagatcgagaaaag
actgtagtaagtcaaactgaagcactcttgaaacgactgaagcaagacattaataatctg
aggaggggaaaatctgagctggagcagctggcaaagacagacaaccacacccattttctc
cagtgtttcccatctctccctgttcctcctggatctccaaaagtgcccagtatctctgac
ggttctttggatgttgtaggaaaatcagtctctcaactgagacagaaactggaggatttc
tgcaaagaggagattgaaaaactctctggaagagtgacatgtatccagatcattcccacc
ccagaatatgagtccaggaaacacttcctacagtactacattcagttcaatttggatcca
aacacagtgcataaacatctcagtctgtctgagaggaacagaatggtgagatacactgac
acgctccgggagtatcctgatcatccagacagatttagttattggtggcaggtgttgtgt
agagagagtgtgagtggacgctgctactgggaggttgaatggagtgggattggaaatgtt
gatgtgtgtatatcagtgtcatataagagtattaacaggaagggatggggtgataagagc
aaatttggaagtaatgatcagtcctggtgtttaatctgctctccttccagttacacattc
tgtcaaaataacaaacagactaaactctctgtagtgtccagctctcgtagaataggagtg
tatgtggattacaatatcggaattctgtccttctacagcatctctgaaacaatgtcaatg
aacctcatccacagagtccagaccacattcactcagcctctctgtcctggattttggatt
aatttatcagttggtgatagagtatttggatcacctaaacatccaactttgaaactgtgt
gacaaaatataa
DBGET
integrated database retrieval system
