Labeo rohita (rohu): 127183067
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Entry
127183067 CDS
T09007
Name
(RefSeq) proteoglycan 4 isoform X1
Organism
lroh
Labeo rohita (rohu)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
hSH3
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
127183067
NCBI-ProteinID:
XP_050994838
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Position
20:9630002..9646016
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AA seq
1173 aa
AA seq
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MMEQEESTDFKTLKARFQGENGLKIQTKPALPEKPKSIPPLTKVSNPLISSINTAVQKGS
LHAPRVVFKDDKNLSRQLSPPWGLKAREKEPNNNELLDNQQKEANAVRHNLKTKNLPLVL
PVPPKTRPSESDSSPRTPVSASPAKVTTPKKFVFTPQKTNKDEYEKTDPVREVETPKKSM
KDRNLPLVLPVPPKKAESPEPEPSPRTPVSVPPAKVSTPKSTVFTPQKTSQDENLPLVLP
VAPIKADTPGPGPSPYTPLSSTPKNFVFTTQKISRDKNEEADTVERPTPASHTPAPSYPA
PAGPSVTTNPPTQSVPVVPKAVVPPQTSTGTQPTPSIPAPGISTLEPKIPEPAIPRPIIP
SQDIPKSKPDTSISTDSEPLKPNIHMLSLSEVFPPPKGSPPPEFTDIPPPVFDEDFPDGD
FPDQAIPTPATHTFMAPVLKSPVVSRSPSPSTPPSVSPETSVYPLYTPNPVLSPPPEVHT
RAAPIDMVLENTKSLTEKAADNPERPKEDQPSTKPLSALSLLARAEQMASVKRSPNDSRV
FNLLERAKRKSTVNPLATTLENTFIPENTTLVETATPEIPLPETLTPLPKTATTEVTQPD
LAPPEKTLPQLATTLETLPEEVQSGPEVSDIPNLPPVDYVDRARLPSKTQSPETHPPEVN
GFDHRVVTVVKPVNPPPPPPRKALPVTPIVDPPLEKPTQSLARDFQIPTTPSEHLETPED
SLYDNSFDNSFYEDVEEPEAPVLSTFRPPSVPSSASSTKRPVSVHEDAFLRQLNSKQQLK
ENVFPNMDDRDVDYGSVNSGSPYPETQAAVHHDSAQSSPALTPSGTLDRVDNVYEDHVDS
KKGKTTKTKKQKGPPKNPYADTPTVVEEAPKKNLFARKNSGKAADDKELKKKEKQREKEK
EKEKEREKKEQKEKEKKENEIRKKFKITGQEEPIYHVKVIEDCKGRKNDLPVKVGDTVSI
IRTNNCPKGKWLAKDSNNKYGYVPVESVDLNINGIMELGKKTTASNRANGSGQKDPEVTS
TGSRTSEQYGMNHESFSEDSEEWTCDDDDPVFGSPNETAHMALNQSHATPAQDPVHQDQS
DSAYMNMPPKQEALQKLSTFFMQPKTPSQPLPQNYSTVMPEPTPALEEDSDSLNKEEEDV
SDLQILPPPDLYADIIAGDPIPIYSKPIKLVSK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacaggaggaatcaacagactttaaaaccctgaaggcacggttccagggtgaa
aacggtctgaagatccagactaaacccgccctcccagagaaacctaaaagcatccctccg
ctgacaaaagtcagcaatcctttgatctcgtccattaatactgctgtgcaaaaagggtcg
cttcacgcaccacgtgtggtcttcaaagatgacaaaaatctcagtcgccagctctctcca
ccttggggattaaaggccagagagaaggaacccaacaataatgaactgctggataatcag
cagaaggaggccaacgctgtaagacataatctgaaaaccaagaatcttccactggttctc
cctgtaccaccaaaaaccagaccttcagagtctgattccagcccacgtacacctgtgtct
gcttcaccggccaaagtgacaacacccaaaaagtttgtatttacccctcaaaaaacaaac
aaagatgaatatgagaaaacagaccctgtgagggaggtagaaactcccaaaaagtctatg
aaggaccggaatcttccattggttctgccagtgcctccaaaaaaagctgaaagcccagaa
cctgaacccagcccacgtacaccagtgtctgttccaccagccaaagtgtccacacccaaa
agtactgtgtttactcctcaaaaaactagtcaagatgagaatcttccattggttcttcca
gtggctccaataaaagctgataccccagggcctggacccagcccctatacacctctgagt
tccacacccaagaattttgtgtttaccactcaaaaaattagcagagataagaatgaagag
gcagatacagttgaaagaccaacaccggctagtcatacccctgctccaagttacccagct
cctgctgggccatctgtaacaactaaccctcctactcaaagtgtacctgttgtccctaag
gctgttgtacctcctcagacttcaactggaacacaacctaccccaagtattccagctcca
ggcatttcgaccttagagccaaagattcctgaaccagccatcccaagaccaatcattccc
tctcaagacattccgaaatcaaagccagacacctctatttcaactgacagtgaacctctt
aaaccaaatatacatatgctcagtttatccgaagtatttcctccccccaaaggaagtcca
cctccagaattcactgatattcccccccctgtttttgatgaagactttccagacggagac
tttcctgaccaagctatacccactccagcaacacatacatttatggccccagttctcaag
agtccagttgtctccaggtcccctagcccatccacccctccatcggtatctccagagacc
tcggtgtatcccttatatacacccaatccagtcttaagccctcctccagaagttcacact
cgtgctgcacccatagacatggtactggagaacacaaaatctctgactgaaaaggcagct
gataacccagagaggcctaaggaggaccagccgtcaaccaagcctctttcagctctctca
ttgttggctagagcagagcagatggcctcagtaaaacggtcaccaaatgatagccgtgtt
tttaaccttctggaaagggctaaaagaaagtccactgtgaacccactggctaccactctt
gaaaatacatttatacctgaaaacacaaccctagttgagacagctacacccgagatacct
ttgcctgaaactctcacacctcttcctaagactgccacaactgaggtgacccaacctgat
ctagctccacctgaaaaaaccttaccacagcttgccacaactttagaaacactgcctgag
gaagtccaatctggaccagaagtgtctgatatccctaatctccctccagttgactatgtg
gatcgtgctcggttgccatctaaaactcagtcacctgaaacccacccacctgaggttaat
ggctttgatcacagggtggtgacagtggtcaaaccagtgaatcctcctcccccaccgcct
agaaaggctctgccagtcacacccattgtcgatcccccacttgagaagccaactcaatct
cttgctagagacttccagattcctacaacaccatctgaacatctagaaacacctgaagac
tcactgtacgacaactcatttgacaactcattttatgaagatgttgaggaacctgaggct
ccagtactttcaacctttaggcctccatcagtaccatcatcagcttcgagtaccaaacga
ccagtttcagttcatgaagatgccttcctgagacagctgaactcaaaacaacagttgaaa
gagaacgtgtttccgaatatggatgatagagatgtggattatgggtctgtgaactctggc
tctccatatccagaaactcaagctgctgtacatcacgactcagcacaaagctcacctgcc
ttgactccatcagggacccttgatagagttgacaatgtctatgaagatcatgtagacagt
aaaaaaggcaaaacaacaaagacaaagaaacagaaagggcctccaaagaatccatatgct
gatacaccaactgtggtggaggaggctcccaagaaaaacttgttcgccaggaagaactca
ggaaaagcagcagatgacaaagaactaaagaaaaaagagaagcagcgggaaaaggaaaaa
gagaaagagaaggaaagagaaaagaaggagcagaaagaaaaggaaaagaaagaaaatgaa
ataaggaaaaaatttaagatcacaggccaggaagagcccatttatcacgttaaagtgatc
gaggactgtaagggccgtaaaaacgacctgccggtgaaggttggagacaccgtgagcatc
atccgcaccaacaactgcccgaaaggaaaatggctggcaaaggacagcaacaacaaatat
ggctacgtcccagtggagagtgtggatttgaacatcaatggcattatggagctggggaag
aagacgacggcgtctaacagagccaacggcagtggacagaaagacccagaggtcaccagt
acaggcagcaggacctcagagcagtacggcatgaaccatgagagcttctcagaagacagt
gaagaatggacctgtgatgatgatgaccctgtgtttggctctcctaatgaaacagcgcac
atggcactgaatcaatcacatgccacaccagctcaagatcctgttcaccaagaccaaagt
gattcagcgtatatgaatatgccaccaaaacaggaagctcttcaaaaactctccacattc
tttatgcaaccgaagacgccctctcagcctctaccacaaaactacagcacagtaatgcca
gagcctacaccagcacttgaagaggattctgacagcttaaataaagaggaagaagatgtc
tcagatctccagattcttcctcctccggacctgtatgccgacatcatcgctggagacccc
attcctatttacagcaagccaatcaaactagtctcgaaatag
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