Lynx rufus (bobcat): 124504816
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Entry
124504816 CDS
T08475
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04022
cGMP-PKG signaling pathway
lruf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
124504816
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124504816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124504816
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124504816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
124504816
NCBI-ProteinID:
XP_046926329
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MNRSPAFAPRRAGSPRRAAGVGARRQESRDYLLLDAGPGDGGGAQPPRPEPGYHRCGQDT
DNRLAHRRQTILREKGRRLANRGPAYMFNDRSTSLSIEEERFLDAAEYGNVPVVRKMLEE
CLSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAI
LSHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLR
KGARIERPHDYFCKCSECSQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALEL
SNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDIEVYHGGGDHS
RPNLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPF
LALIYWFAPCSKMAKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDN
AKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTEGPKEYLFELWNMLDFGMLAIFAA
SFIARFMAFWHASKAQHIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLY
AIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYY
IGAKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVL
LNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLR
LKKWISEMFQAHKKGFQEDAEMNKRNEEKKFGIWGSHEDLSKLSLDKKQKPEDSRAEVTC
PVSFQTTAGIQIQIYLIPKQALISTAPTWCISCLHPCGLNTLGHSKQSSIRSSQDFQLNS
FSNPPGKYQKIMKRLIKRYVLQAQIDRESDDVNEGELKEIKQDISSLRYELLEEKTQNSE
DLAELIRKLGEKLSTEPKQEEGNR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggagccccgcgttcgcgccccggagggccgggtctccccggagggcggctggg
gtcggtgcacggcgccaggagagccgggactacctgctgctggacgcggggccgggggac
ggcggcggggctcagcccccgcggccggagccgggttaccaccgctgcggccaggacacc
gacaacagactggcccaccggcggcagacgattctccgtgagaaggggagaaggttagcc
aaccgaggaccagcttacatgtttaacgatcgctcaacaagcttatctattgaggaggaa
cgttttttagatgctgctgaatatggcaacgtcccagtggtgaggaagatgttagaagaa
tgtctgtccctcaatgttaactgtgtggattacatgggccagaatgccctgcagttggcc
gtggccaacgagcatctggaaattacagaacttcttctcaagaaagaaaacctctctcgt
gttggggatgctttgcttctagctattagtaaaggttatgttcggatcgtggaagctatt
ctcagtcatccagcttttgctgaaggcaagaggttagcaaccagccctagccagtctgaa
ttgcagcaagatgatttttatgcctatgatgaagacggaacacggttctctcatgatgtg
actccgatcatcctggccgcccactgccaggaatatgaaatcgtgcataccctcttgcgg
aagggtgctcggattgaacggcctcatgactacttctgcaagtgcagtgagtgcagccag
aaacagaagcatgactcctttagtcactccagatctaggattaatgcctacaagggcctg
gcaagtccagcttacctgtcactgtctagtgaagacccagtcatgacagctttagaactc
agcaatgagctggccgtgctggccaacattgagaaggagttcaagaatgactacaaaaaa
ctgtcaatgcagtgcaaggattttgttgttggactccttgatctgtgcagaaataccgaa
gaagtggaggccattctgaatggggacatcgaagtgtatcatggtgggggagatcacagc
cgtccaaatctcagccgcttgaaacttgccattaaatatgaagtaaaaaaatttgtagct
catccaaactgtcaacagcagcttctgtccatatggtatgagaacctctccggtctgcgg
cagcagaccatggcggttaagtttctcgtggtcctggcggttgctgtcggattgcccttc
ctggctctcatttactggtttgctccatgcagcaagatggcgaagattatgcgcggaccg
ttcatgaagtttgtggcacacgctgcttccttcaccatttttctggggctgctggtgatg
aatgctgctgacagatttgaaggcaccaaactccttcccaatgaaaccagcacagataat
gcaaaacagctgttcaggatgaaaacgtcctgcttctcatggatggagatgctcattata
tcctgggtaataggcatgatatgggccgaatgtaaagaaatttggacggaaggccccaag
gaatacttgtttgagttgtggaatatgcttgattttggtatgctggcgatctttgctgca
tcattcattgcgagattcatggcattttggcatgcttccaaagcccaacacatcattgat
gcaaatgatactttgaaggacttgaccaaagtcacactgggagacaatgtgaagtattac
aatttggccaggataaagtgggacccctctgatcctcaaattatatctgaaggtctttat
gcaattgctgtagttctaagtttctcaagaatagcttatattttaccagccaatgaaagc
tttggacctctgcagatatcacttggaagaacagtgaaggacatcttcaagttcatggtc
atattcatcatggtgtttgtggcctttatgattggaatgttcaacctctactcctactac
attggtgcaaaacaaaatgaagctttcacaacagttgaggagagttttaagacactgttc
tgggctatatttggactttctgaagtgaagtcggtggtcatcaactataatcacaaattc
attgaaaatatcggttatgttctttatggagtctataatgtcacaatggtcattgttttg
ttaaatatgttaattgcaatgatcaacagttcattccaggaaattgaggacgatgctgat
gtcgagtggaaatttgcaagggccaagctttggttttcctactttgaagaggggagaaca
ttacctgttcccttcaacctggtgccaagtccaaagtccctgttttatctcttactgagg
cttaaaaaatggatttctgagatgttccaggcccataaaaaaggtttccaggaggatgca
gagatgaacaagagaaatgaagaaaagaaatttggaatttggggaagtcatgaagacctt
tcaaaattatcccttgacaaaaaacagaaacccgaggacagtagagctgaagtaacctgc
ccagtctcatttcaaacaacagccggaattcaaattcagatctacttgattccaaagcaa
gcgcttataagcactgcccccacgtggtgcatttcatgtctgcatccctgtggactgaac
acgcttgggcatagtaaacaatcaagtataaggagctcacaagatttccagttaaatagt
ttcagtaatcctccaggaaagtatcagaaaattatgaagaggctcattaaaagatacgtc
ttacaagcccagatagaccgggagagtgacgacgtgaatgaaggggaactgaaggaaatt
aaacaggacatctcaagcctccgctatgagctccttgaagagaaaactcagaattcagaa
gacctcgcagaacttattagaaaacttggggagaaattatcaacggaaccaaagcaagag
gaaggcaatagataa
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