Lynx rufus (bobcat): 124505105
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Entry
124505105 CDS
T08475
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lruf01002
]
124505105
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124505105
Enzymes [BR:
lruf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124505105
Peptidases and inhibitors [BR:
lruf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124505105
Ubiquitin system [BR:
lruf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124505105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124505105
NCBI-ProteinID:
XP_046926850
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MVPGEENQLVPKEDVFWRCRQNIFDEMKKKFLQIENAAEEPRVLCIIQDTTNSKTVNERI
TLNLPASTPLRKLFEDVANKVGYINGTFDLVWGNGINTADMAPLDHTSDKSLLDANFEPG
KKNFLHLTDKDGEQPQILLEDSSAGDDSVHDRFIGPLPREGSVGSTSDYVSQNYSYSSIL
NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSGTEKISKPGL
EKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKNLVQRERELEEQEKRQR
EIERNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEEVIPMDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRKPDQVFQSYKPGEVMVKVHV
VDLKAESVAAPVTVRAYLNQTVTEFKQLISKAIHLPAETMRIVLERCHNDLRLLTVPSKT
LKAEGFFRSNKVFVESSETLDYQMAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRT
ACQKAGGDSGGNVDDDCDRVKGPVGSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKS
TETSDFENIESPLNERDSSASVDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDS
DILSSSHSSDTLCNADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEY
DESGKSRGEIQYMYFKAEPYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGALSSH
FKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQEPCK
FLLDAVFAKGMTVRQSKEELIPQLREQCGLELSTDRFRLRKKTWKNPGTVFLDYHIYEED
INISSNWEVFLEVLDGVEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESSSVDELREKL
CEISGIPLEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRD
KTEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaagaggatgtgttttggagatgcaga
caaaatatctttgatgaaatgaagaagaaatttttacagatagaaaatgctgctgaagaa
cctagagttttatgtataatacaagatactactaattcaaagacagtgaatgaacggatc
actttaaatttgccagcttctactccactcaggaagctctttgaagatgtggccaacaaa
gtaggctacataaatggaacctttgatttagtgtggggaaatggaatcaatactgctgat
atggctccactggaccataccagtgacaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggtgaacagcctcaaatactgctggag
gattccagtgccggggatgatagtgtccatgaccgatttataggtccacttccaagagaa
ggttctgtgggctctaccagtgattatgtcagccaaaactactcctattcatctatcttg
aataaatcagaaactggatatgtgggattagtaaaccaagcaatgacttgctacttgaac
agccttttgcagacactttttatgactcctgaatttaggaatgcattatataaatgggaa
tttgaagaatctgaagaagatccagtgacaagtatcccatatcaacttcagaggcttttt
gttttgttacaaaccagcaaaaagagagcaattgaaaccacagacgttacaaggagcttt
ggatgggatagtagtgaggcttggcagcagcatgatgtacaagaactgtgcagagtcatg
tttgatgctttggaacagaaatggaaacaaacagagcaggctgatcttataaatgaacta
tatcaaggcaagctgaaggactacgtgagatgtctggaatgtggttatgagggctggaga
atcgacacatatcttgatattccattggtcatccggccttatgggtccagtcaagcattt
gctagtgtggaagaagcattgcatgcatttattcagccagagatcctggatggcccaaat
caatatttttgtgaacgttgcaagaagaagtgtgatgcacgaaagggtcttcggtttttg
catttcccttacctgctgaccttacagttgaaaaggtttgattttgattatacaaccatg
cacaggattaagttgaatgatcggatgacgtttcctgaggagctagatatgagtacattt
attgatgttgaagatgagaaatcccctcagaccgaaagttgcactgacagtggggcagaa
aatgaaggcagttgtcacagcgatcagatgagcaatgatttttcgaatgatgatggtgtt
gatgaagggatctgccttgaaagtaatagtggaactgaaaaaatttcaaaacctggactt
gaaaagaattccttgatctatgagctcttctccgttatggttcattcagggagtgctgct
ggtggtcattattatgcttgtataaagtcattcagtgatgaacagtggtacagcttcaat
gatcaacatgtcagcaggataacacaagaggacattaagaaaacacatggtggatcttca
ggaagccgaggatattactcaagtgcttttgcaagctccacaaatgcttatatgctgata
tatagactgaaggatccagcacgaaatgcaaagtttctagaagtagatgaatatccagaa
catatcaaaaacttggtgcagagggagagagaattggaagaacaagaaaaaaggcaacga
gaaattgagcgcaatacatgcaagataaaattattctgtttgcatcctgtgaaacaagta
atgatggaaaataaattggaggttcataaggataagacattaaaggaagcagtagaaatg
gcttataagatgatggatttagaagaggtcatacccatggattgctgtcgccttgttaaa
tatgatgaatttcatgattaccttgaacgatcgtatgaaggagaggaagataccccaatg
ggacttctactaggaggagtcaagtcaacatacatgtttgatctactgttggagacgaga
aaacctgaccaagttttccagtcttacaaacctggagaagtgatggtgaaagttcatgtt
gttgatcttaaggcagaatctgtagctgctcctgtcactgttcgtgcttacttaaatcaa
acggtcacagagttcaaacagcttatttcaaaggccatccatttacctgctgaaaccatg
cggatagtgctagagcgctgccacaatgatctgcgcctcctcactgtgcccagtaagacc
ctgaaagctgaagggttttttagaagtaacaaggtatttgttgaaagttctgagactttg
gattaccagatggcctttacagactctcatttgtggaaactcctggatcgtcatgcaaat
acgatcagattatttgttttgttacctgaacagtccccaggctcttattccaaaaggaca
gcgtgccagaaagctgggggtgattctggtggtaacgtggatgatgactgtgatagagtc
aaaggacctgtggggagcctcaagtctgtggaagctattctcgaagaaagcactgaaaaa
ctcaaaagcttgtcactacagcagcagcaagatggagataatggagacagcagcaaaagt
actgagacaagtgactttgaaaacatagaatcacctctcaatgagagggactcttcagcg
tcagtggacaatagagaacttgaacagcacattcagacttctgatcccgaaaattttcaa
tctgaagaacgatcagactcagatgtgaataatgacaggagtacaagttcagtggacagt
gacattcttagctccagtcacagcagtgacactttgtgcaatgctgataatgctcagatt
cctttggctaatggacttgactctcatagcatcacgagtagtagaagaactaaagcaaat
gaaggcaaaaaagagacatgggacacagcagaagaagactctggaacggatagtgaatac
gatgagagtggcaagagcaggggagaaatacagtacatgtatttcaaagcagaaccctat
gctgcagacgaaggttctggggaaggacataaatggctgatggtgcatgttgataaaaga
attacactggctgctttcaaacaacacttagagccctttgttggagctttgtcctctcac
ttcaaggtcttccgggtgtatgccagcaaccaggagtttgagagcgtcaggctgaacgag
acactttcatccttttcagacgacaataagattacaattagactggggagagcacttaaa
aaaggagaatacagagttaaagtgtaccagctgctggtcaatgagcaagagccatgcaag
tttctgctagatgctgtgtttgctaaaggaatgacagtacggcaatcaaaagaggaatta
attcctcaactcagggagcagtgtggtttagagctcagtactgacagatttcgtctaagg
aaaaaaacatggaagaaccctggcactgtctttctggattatcatatttatgaagaagac
attaatatctccagcaactgggaggttttccttgaagttcttgatggggtggagaagatg
aaatccatgtcccagcttgcagttttgtcaagacggtggaggccttcggaaatgaagctg
gatcccttccaggaggttgtgttggaaagcagtagtgttgatgagctgcgagagaagctt
tgtgaaatcagtggaattcctttggaagatattgaatttgctaagggtagaggaactttt
ccctgcgatatttctgtccttgatattcatcaggatttggactggaatcctaaagtttct
accctaaatgtctggcctctttatatttgtgatgatggtgccgtcatattttatagggat
aaaacagaagaattaatggagttaacagacgaacaaagaaatgaactgatgaaaaaagaa
agcagtcgactgcagaagacgggacatcgtgtaacgtactcacctcggaaagagaaagca
ctaaaaatatatctggatggagcaccaaataaagatctgactcaagactga
DBGET
integrated database retrieval system
