Lynx rufus (bobcat): 124506858
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Entry
124506858 CDS
T08475
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124506858
03036 Chromosome and associated proteins [BR:
lruf03036
]
124506858
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124506858
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
Pre-60S particles
Helicases
124506858
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
124506858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124506858
NCBI-ProteinID:
XP_046928823
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MPGKLLSDVDLDSDTAMEKLETPRKQNAKKGKKEKPKSNKTEEATEVKEETISPKAKKIK
KKAESSEIDVNSPKSKKAKKKEEPSQDDIISPKTKSVKKPKESFEKKVVSPKTKKVMKSE
EPSEEEIGAPKPKKMKKEKEMNGDIGEKSPKLKNGFPHSGPVSNSSEESNSELEQEIPVE
QKEGAFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAI
PLIEKLQGELQDRKRGRAPRVLVLAPTRELANQVSRDFSDITRKLAVACFYGGTPYGGQI
ERMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYK
KDSEDNPQTLLFSATCPHWVYNVAKKYMRSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQ
RAAVIGDVIRVYSGFHGRTIIFCETKKEAQELSQNVSIKQDAQSLHGDIPQKQREITLKG
FRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQ
HKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHFKQSAEKLI
EEKGAVEALAAALAHISGATSVDQRSLINSDAGFVTMILRCSIEMPNISYAWKELKEQLG
EEIDSKVKGMVFLKGKQGVCFDVPTAAVTEIQEKWHDSRRWQLSVATEQPELEGPREGYR
GFRGQREGSRGFRGQREGNRSFRGQREGNRSFRGQRSGGGNKSNRFQNKGQKRSFSKAFG
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaactccttagtgacgtggatttggactcagacacggccatggaaaaactg
gagacaccgcgaaagcagaatgcgaagaagggtaaaaaagagaagccaaagtctaataag
actgaagaggcaacagaagtaaaggaagaaactatttcccccaaagccaaaaaaattaaa
aagaaagccgagtcttctgagattgacgtgaattctcctaaatccaaaaaggcaaaaaag
aaagaggagccatctcaggatgacattatttctcctaaaaccaaaagtgtgaagaaacca
aaggagtcctttgaaaagaaagttgtttctcctaaaaccaaaaaagtaatgaaaagtgag
gagccttctgaagaagaaataggtgctcctaagccgaagaagatgaaaaaagaaaaggaa
atgaatggagacattggagagaaaagccccaaactgaagaatggattccctcattctgga
cctgtctctaactccagtgaagaaagtaacagtgaattagagcaggaaatacctgtggaa
caaaaagaaggagctttctctaattttcccatatctgaagagaccattaaacttctcaaa
ggccgtggggtgacctttctgtttccgatacaagcaaagacatttcaccatgtctatagt
ggaaaggacttaattgcacaggcacggacaggaaccgggaagaccttctcctttgccatc
cctttgattgagaaacttcagggagaactacaagaccggaaaagaggccgtgcccctcgg
gtactggttcttgcacccacaagggagttggccaatcaagtaagcagagacttcagtgac
atcacaagaaagctggcagtggcttgtttttatggtggaactccctatggaggtcaaatt
gaacgcatgcggaatgggattgatatcctggttgggaccccaggtcgtatcaaagaccac
ctgcagaatggcaagctagatctcaccaaacttaagcatgttgtcctggatgaagttgac
cagatgttagatatggggtttgctgatcaagtggaagagattttaagtgtggcatacaag
aaagattcggaagacaatccccaaacattgcttttttctgcaacctgccctcattgggta
tataacgttgctaagaaatacatgagatctacatatgaacaggtggacctcattggtaaa
aagactcagaaaacggcaataactgtggagcacctggctatcaagtgccactggactcag
agggcagcagttattggggatgtgatccgagtatatagtggttttcatggacgcactatc
atcttctgcgagaccaagaaagaagcccaggagttgtcacagaatgtgtccataaagcag
gatgcccagtcattacatggagatattccccagaagcagagagaaatcactctgaaaggt
tttagaaatggtgattttggagttttggttgcaaccaatgttgctgctcgtgggttagac
atccctgaagttgatctggttgtacagagttctccaccaaaggatgtggaatcctacatt
catcgttctggaaggacgggcagagctggaaggacggggatttgcatctgcttttatcag
cacaaggaagaatatcagttagcacaagtggagcaaaaagcgggaattaaatttaaacga
ataggtgttccttctgcaacggagataataaaagcttccagcaaagatgccatcaggctt
ttggattctgtgcctcccactgccattggtcacttcaagcagtcagctgagaaactgata
gaggagaagggagccgtggaagccttagcagcagcactggcccatatttcaggtgccacg
tcagtagaccagcgctctttgatcaactcagatgcgggctttgtgaccatgatcttacga
tgctcgattgaaatgccaaacattagttatgcttggaaagaacttaaagagcagctgggt
gaagaaattgattccaaagtgaagggaatggtttttctcaaaggaaagcagggggtttgc
tttgatgtccctactgcagcagtaacagaaatacaggagaaatggcatgattcacgtcgc
tggcagctatctgtggccacggaacaaccagagctagaaggaccacgggaaggatatcga
ggcttcaggggacagcgggaaggcagtcgaggcttcaggggacagcgagaaggaaacaga
agcttcaggggacaacgggaaggaaatcgaagcttcagaggacagcgatcaggaggtggc
aacaaaagtaacagattccaaaacaaaggccagaagcggagtttcagtaaagcatttggg
cagtaa
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