Lynx rufus (bobcat): 124512908 Help Entry 124512908         CDS       T08475                                  Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism lruf  Lynx rufus (bobcat) Pathway lruf04151   PI3K-Akt signaling pathway lruf04510   Focal adhesion lruf04512   ECM-receptor interaction lruf04611   Platelet activation lruf04820   Cytoskeleton in muscle cells lruf04926   Relaxin signaling pathway lruf04933   AGE-RAGE signaling pathway in diabetic complications lruf04974   Protein digestion and absorption lruf05146   Amoebiasis lruf05165   Human papillomavirus infection lruf05205   Proteoglycans in cancer lruf05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:lruf00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     124512908   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124512908  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124512908   09142 Cell motility    04820 Cytoskeleton in muscle cells     124512908  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     124512908   09152 Endocrine system    04926 Relaxin signaling pathway     124512908   09154 Digestive system    04974 Protein digestion and absorption     124512908  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     124512908   09172 Infectious disease: viral    05165 Human papillomavirus infection     124512908   09174 Infectious disease: parasitic    05146 Amoebiasis     124512908   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     124512908   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     124512908  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lruf00536]     124512908 Glycosaminoglycan binding proteins [BR:lruf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124512908 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  124512908 NCBI-ProteinID:  XP_046936505 LinkDB All DBs Position Unknown AA seq 1461 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQEEEDIPPVTCVQNGLRYYDRDVWKPEACRICVC DNGNVLCDDVICDETKNCPGAHVPPGECCPVCPDGEASPTGQETTGVEGPKGDTGPRGPR GPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGP SGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGE RGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGS EGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP SGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGP PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGS PGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGP PGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGV PGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGA PGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGE AGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP AGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGK EGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGL PGQRGERGFPGLPGPSGEPGKQGPSGPSGERGPPGPMGPPGLAGPPGESGREGSPGAEGS PGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGA RGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGP PGAAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQ PPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLK MCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPHVAQKNWYISKNPKDKRH VWYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGN LKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGNWGKTVIEYKTTKTSRLPIIDVA PLDVGAPDQEFGIDIGPACFL NT seq 4386 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggagggccaagaagaagaagacatcccaccagtcacctgcgtacagaac ggcctcaggtactatgaccgagatgtttggaaacccgaggcctgccggatctgtgtctgc gacaacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgccccggc gctcatgtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctacc ggccaagaaaccacaggagtcgagggacccaaaggagacactggcccccgaggcccaagg ggacctgccggcccccctggccgcgacggcatccctggacagcctggccttcctggaccc cccggccctcccggaccccccggaccccctggcctcggaggaaactttgctccccaaatg tcttacggctacgatgagaagtcaactggaggaatctctgtgcctggccccatgggtcct tctggtcctcgtggtctccctggtccccctggcgcacctggtccccaaggtttccaaggc ccccctggtgagcctggcgagcctggagcttcaggtcccatgggtccccgtggtccccct ggtccccctggcaagaacggagatgacggtgaagctggaaagcctggtcgtcctggtgag cgtgggcctcctggacctcagggcgcccggggattgcctggaactgctggccttcctgga atgaagggacacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgct ggtcccaagggcgagcctggtagccccggtgaaaatggagctcctggccagatgggtccc cgtggtctgcctggtgagagaggacgccccggagcccctggccctgctggtgctcgtgga aatgacggtgctaccggtgccgccggcccccctggtcccactggccccgctggtcctccc ggcttccctggtgctgttggtgctaagggtgaagccggtccccaaggagcccgtggctct gaaggtccccagggtgtgcgtggcgagcccggcccccccggccctgctggtgctgctggc cctgctggaaaccccggtgctgacggacagcctggtgccaaaggtgccaacggcgctcct gggattgctggcgctcctggcttccctggtgcccgaggcccctctggaccccagggcccc agcggccctcccggtcccaagggtaacagtggcgaacctggtgcccccggcaacaaagga gacactggcgccaagggagagcccggccccactggtatccaaggcccccctggccccgct ggggaagaaggaaagcgaggagcccgaggcgaacccggccccactggcctgcccggaccc cctggcgagcgcggcggacccggtagccgtggcttccctggcgcagatggtgtggctggt cccaagggtcccgccggtgaacgtggttctcctggccctgctggccccaaaggttctcct ggtgaagctggtcgccccggtgaagctggtctgcctggtgccaagggtctgaccggaagc cccggcagccccggtccggatggcaaaactggtccccctggtcccgctggtcaagatggt cgccccggacccccaggcccccccggtgcccgtggtcaggctggtgtgatgggattccct gggcctaaaggtgctgctggagagcctggcaaagcaggagaacgaggtgttcctgggccc cctggcgctgttggtcctgctggcaaagatggagaagctggagctcagggaccccccggc cctgccggccccgctggtgagagaggcgaacagggccctgctggctctcccggattccag ggtcttcctggccccgcgggtcctcccggtgaagcaggcaaacctggcgaacagggtgtt cctggagatcttggtgcccccggcccctctggagccagaggagagagaggtttccctggt gaacgcggtgtgcaaggtccccccggtcctgccggtcctcggggagccaacggtgcccct ggcaatgatggtgctaagggtgatgctggtgcccccggagcccccggtagccagggcgct cctggccttcagggaatgcctggtgaacgaggtgcagctggccttcctggccctaagggt gacagaggcgatgccggtcccaaaggtgctgatggttctcctggcaaagatggtgtccgt ggcctgactggccccattggtcctcctggccccgctggtgcccccggtgacaagggtgaa gctggtcccagtggccccgctggtcccactggagctcgtggcgcccccggagaccgtggt gagcctggtccccccggccctgctggcttcgctggcccccctggtgctgatggccaaccc ggtgctaaaggcgagcccggagacgctggtgctaaaggcgatgctggtccccctggtccc gctggccccactggaccccccggccccatcggcaacgttggtgctcctggacccaaaggt gctcgaggcagtgccggtccccctggtgctactggtttccctggtgctgctggccgagtc ggtcctcccggcccctctggaaacgctggaccccctggccctcccggccctgtcggcaaa gaaggcggcaaaggcccccgcggtgagactggccccgctgggcgtcccggggaagtcggt ccccctggtccccccggccctgccggtgagaaaggatctcctggtgctgacggacctgct ggtgctcccggcactcccggacctcaaggcattgctggacagcgtggtgtggttggcctg cccggtcagcgaggagaaagaggcttccctggtcttcccggcccctctggtgaacctgga aaacaaggtccttctggaccaagtggtgaacgtggcccccctggtcccatgggcccccct ggattggctggaccccctggcgagtctggacgtgagggatctcctggtgctgaaggttcc cctggacgagatggttctcccggccccaagggtgaccgtggtgagaccggccctgctggc ccccctggtgctcctggcgctcctggtgcccctggtcccgtcggccccgctggcaagaat ggcgaccgtggtgagactggtcccgctggtcccgccggtcccatcggccccgtcggtgct cgtggtcccgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggt gacagaggcataaagggtcaccgtggcttctccggtctccagggtccccctggccctccc ggctctcctggtgaacaaggtccttctggagcttctggtcctgctggtccccgaggtccc cccggtgctgctggctctcctggcaaagatggactcaacggtctcccaggccccatcggc ccccctggtcctcgtggtcgcactggtgatgctggccctgttggtccccccggccctcct ggaccccccggtcctcccggtcctcccagcggtggtttcgacttcagcttcctgccccag ccacctcaagagaaggctcacgatggcggccgctactaccgggccgatgatgccaacgtg gtccgtgaccgtgacctggaggtagacaccaccctcaagagcctgagccagcagatcgag aacatccggagccccgaaggcagccgcaagaaccctgcccgcacctgccgcgacctcaag atgtgccactccgactggaagagcggagaatactggatcgatcccaaccaaggctgcaac ctggatgccatcaaggtcttctgcaacatggagacaggtgagacctgcgtgtaccccact cagccccacgtggcccagaagaactggtacatcagcaagaaccccaaggacaagaggcac gtctggtatggcgagagcatgaccgacggattccagttcgagtatggtggccagggctcc gatcccgccgatgtggccatccagctgactttcctgcgcctgatgtccaccgaggcgtcc cagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcagactggcaac ctcaagaaggccctgctcctccagggctccaacgagatcgagatccgggccgagggcaac agccgcttcacctacagcgtcacctacgacggctgcacgagtcacaccggaaactggggc aagacagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgatgtggcc ccattggacgttggcgccccagaccaggaattcggcatcgacattggccctgcctgcttc ctgtaa

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