KEGG   Lynx rufus (bobcat): 124517791
Entry
124517791         CDS       T08475                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03420  Nucleotide excision repair
lruf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124517791
   03460 Fanconi anemia pathway
    124517791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lruf03032]
    124517791
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124517791
DNA replication proteins [BR:lruf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    124517791
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124517791
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 124517791
NCBI-ProteinID: XP_046943320
LinkDB
Position
Unknown
AA seq 916 aa
MEPVPPARPTAMAPLLEYERQLVLELLDADGLVVCARGLGADRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFISQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLT
NRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVGKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCITFLNLLESLRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDAKMNKKGKVSEK
MEIEQVQETKKELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDERTCSQL
REYITIGAEAFLLRLYRKTFERDSKAEDVWVQFRNEDSAKRMAKSHKRPKDPHSKQRAAP
KERTLKKKKRRLTLTQMIGKPEEPEEEGDAKEGCPGDKGSSPDSSLEEIKHEEFDLNLSS
DAAYGILKDPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEGREGRDEGNLDLVRGS
ASTGSPTDTRKAGGQEQNGTQQSIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
EMCVERKSISDLIGSLNNGRLYGQCISMSRYYKRPVLLIEFDPSKPFSLTSRGAFHQEIS
GNDVSSKLTLLTLHFPRLRLLWCPSPHATAELFEELKQNKPQPDAATAMAVTADSETLPE
SEKYNPGPQDFLLKMPGVNAKNCRALMHHVKNIAELASLSQDKLAGILGNASNAKQLYDF
IHTPYAEFVCKGKMRK
NT seq 2751 nt   +upstreamnt  +downstreamnt
atggagccggtaccgccggctcggccgaccgctatggcgccgctgctggagtatgagcgg
cagctggtgctggaactactggacgcggacgggctggtagtgtgcgcccgcgggctcggc
gcggatcggctcctctaccacttcctccggctgcactgccaccccgcgtgcctggtgctg
gtgctcaacacgcagccggccgaggaggagtattttatcagtcagctgaagattgaagga
gtggaacacctccctcgtcgtgtaacaaatgaaatcacaagtaacagtcgctacgaggtc
tacacccaaggaggtgtgatatttgcaacaagtcgaatacttgtggtcgacttcttgact
aatagaataccttcagatttaatcactggcatcttggtgtatagagcgcacaggataatc
gagtcttgtcaagaagcattcatcttgcgtctgtttcgccagaaaaacaagcgtggtttt
attaaagctttcacagacaatgctgtcgcctttgacactggtttttgtcacgtggaaaga
gtgatgcgaaatcttttcgtagggaagctgtatctgtggccaaggttccatgtagcagta
aactcattcttagaacagcacaaacctgaagttgtagaaattcacgtttctatgacgcct
gccatgctcgccatacagactgccatcctcgacatcctaaatgcgtgtctgaaagaactg
aaatgccacaacccatcgctcgaagttgaagatttgtctttagaaaatgctattggaaaa
ccgtttgacaagacgatccgccattatctggatcccttgtggcaccagcttggagccaag
actaagtccttggttcaggatttgaagatattacgaactttgctgcagtatctctctcag
tatgattgtatcacattccttaatcttctggaatctctgagagcgacagagaaggctttt
ggtcagaattcaggttggctctttcttgactccagcacctcgatgtttgttaatgctcga
gcaagggtttatcatcttccagatgccaaaatgaacaaaaaaggcaaagtgtctgaaaaa
atggaaattgaacaagtgcaagaaacaaaaaaggaattggtgctagaaagcaacccgaag
tgggaagctctgaccgaagtactgaaagaaattgaggcggaaaataaggagagtgaagcc
cttgggggtccaggtcaggtactgatttgtgcaagtgatgagcgaacgtgttcccagctg
agagagtatatcacgatcggagcagaggccttcttgttgaggctctacaggaagaccttt
gagagggacagcaaagccgaggacgtgtgggtgcaatttagaaatgaggacagtgcaaag
agaatggcgaagtctcacaaaaggcctaaagacccccacagcaaacagagggctgccccc
aaagaaaggactctcaagaagaagaagcggcggttaactttaacacagatgataggaaag
cctgaagaaccggaagaggaaggggatgccaaggaaggctgtcctggagacaagggcagt
agcccagacagttccttagaagaaatcaagcacgaggaatttgacttaaacttgtcatcc
gatgccgcttatggaatactgaaagacccgctcaccatcatccaccctctcttgggctgc
agtgacccctacgctctgacaagggtgctgcacgaggtggaacccagatacgtggttctg
tacgacgccgagctaacgtttgttcgccagcttgagatttaccgggcgagtaggcccggg
aagcctctgagggtttactttcttatatacggaggctcaacagaggaacagcgctatctc
actgctttgcggaaagaaaaggaagcttttgaaaaactcataagggagaaggctagcatg
gttgtgcctgaagggagggaagggagagatgaggggaacctggacctggtgagaggctcc
gcgtccacaggctcacccactgacacacggaaagcaggtggccaggagcagaacggtaca
cagcaaagtatagttgtggatatgcgtgagttccgcagcgaactcccatccctgatccac
cgtcggggcattgacattgaaccggtgacgctggaggtcggagactacattctgactcca
gaaatgtgcgtggagcgcaagagcatcagtgatttgattggctctttaaacaacggccgc
ctctacggccagtgtatctccatgtcccgctactacaagcgcccagtgctcctgatcgag
ttcgaccccagcaagcccttctcgctcacttcccgaggtgccttccaccaggagatctcc
ggcaatgacgtcagttccaagctcaccctcctcacgcttcacttccccagactccggctt
ctctggtgcccctccccccacgccaccgccgagctgttcgaggagctgaaacagaacaag
ccgcagcccgacgcggccacggccatggccgtcacggcggattcggaaaccctcccggag
tcagaaaagtataatccgggtccccaggacttcttgttgaaaatgccaggggtaaatgcc
aaaaactgtcgcgccttgatgcaccacgtcaagaacatcgcagagctggcgagcctgtcg
caagacaagctggcgggtattttgggcaacgcctcgaacgcgaagcagctctatgacttc
atccacaccccttatgccgagtttgtgtgtaaaggcaaaatgagaaagtga

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