Latilactobacillus sakei subsp. sakei: LCA_0620
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Entry
LCA_0620 CDS
T00299
Symbol
rluA1
Name
(GenBank) Pseudouridine synthase, 23S-rRNA-specific
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsa03009
]
LCA_0620 (rluA1)
Enzymes [BR:
lsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LCA_0620 (rluA1)
Ribosome biogenesis [BR:
lsa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LCA_0620 (rluA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAI54924
UniProt:
Q38Y05
LinkDB
All DBs
Position
complement(621318..622208)
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AA seq
296 aa
AA seq
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MIIYQKKVTLETDFSPMSVRGLLNHWLVPQKMQHFLRINREILVNGQYRAFNRNVEPGDE
ITLNFSEVSVKVQNYELDATQSFSVLFESDDLLIVNKPAGIKTHPNRPGENGTLMNQVAF
YLAQQGKKAYMVHRIDEATSGTLLIGKTPIVIGILNRQLSQKKMARQYIAIVDDPKHELA
EHATINSPIGVDPENDRQRCVDYINGLSAITHYRVLSRKGATAVLAVDLETGRTHQIRVH
LASIGHPILGDPLYNPTDTTPRLLLHGQTLRYTEPYTDQPRTVTAPVPDAFEPYLS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgataatttaccaaaaaaaagtaactttagaaacagactttagtccgatgtcagtccgc
ggacttctcaatcactggttagtgccgcaaaaaatgcaacacttcttgcggattaatcgt
gaaatactcgtcaacggacaataccgcgcgtttaaccgcaacgtagaacctggcgatgaa
atcacgctgaatttttcagaagtgtccgtcaaagttcaaaactacgaactagatgcgaca
caatcattcagtgttttatttgaaagcgacgatttattgatcgtcaacaagcctgctggt
attaaaacccatcccaaccgccctggcgaaaacgggacattaatgaaccaagtcgccttt
tatctcgcccaacaaggtaaaaaggcctacatggtccaccgcattgacgaagctaccagt
ggcactttattgattggcaaaaccccgattgtgatcggaattttaaatcgccaactcagt
caaaaaaagatggcccgccagtacattgccatcgtcgatgatcccaaacacgaactagca
gaacatgcgaccattaattcgcccatcggtgtcgacccagaaaatgatcgtcaacgttgt
gtcgattacatcaacggtttatcggcgattacccactaccgcgttttaagtcggaagggc
gcaactgcagtattagcggtcgaccttgaaactggccgaactcaccaaattcgcgtccac
ttggctagtattggtcatccaattctaggggatccactctataacccgacggatacaaca
ccacggcttttactacacggtcagacattgcggtatacagaaccttacacggatcaaccc
cgaaccgtcacagccccagttcctgatgcatttgaaccttatctttcataa
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