Latilactobacillus sakei subsp. sakei: LCA_1024
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Entry
LCA_1024 CDS
T00299
Symbol
rsuA1
Name
(GenBank) Pseudouridylate synthase, 16SrRNA-specific
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsa03009
]
LCA_1024 (rsuA1)
Enzymes [BR:
lsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LCA_1024 (rsuA1)
Ribosome biogenesis [BR:
lsa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LCA_1024 (rsuA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RE_HaeIII
Motif
Other DBs
NCBI-ProteinID:
CAI55326
UniProt:
Q38WV5
LinkDB
All DBs
Position
complement(1014170..1014940)
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AA seq
256 aa
AA seq
DB search
MERLQKVIANAGVASRRKAETLIATGHVTLNGKVVKEMGIKVDSTSAHIEVDGVPLTREK
KVYYALYKPRQVISAVTDDKKRRVVTEYLEDIQERVYPIGRLDYDTSGLLLLTNDGDFAN
MMMHPKYKVDKTYVAKVSGLPTAEMLRQLRKGIMLEKRKTAPAKVKIISTDRRKNTAILS
ITIHEGMNHQVKNMLAAVGLPVSKLKRETYGFLTLDGLVSGEYRALKPIEVAEFKKIAEL
NEKPKHKNRPKLSRHD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaacgactacaaaaagtcatcgcaaatgcgggggttgcctcacgacggaaggctgaa
acgctaattgcgactggtcacgttactttaaacggtaaagtggttaaggaaatggggatt
aaggttgatagtacttctgcgcatatcgaagtggatggtgtgccattaacgcgtgaaaaa
aaggtttattatgccctttataaaccgcgccaagtgatttcagctgtcacggatgataaa
aagcgccgcgtggtcacagaataccttgaagatattcaagaacgcgtttacccaattgga
cgtcttgattacgatacatcaggtttattactattaaccaatgacggtgacttcgccaac
atgatgatgcatccaaaatacaaggttgataagacctatgttgcgaaagtatcaggttta
ccaactgcagaaatgctccgtcaattacggaaggggattatgcttgaaaaacgtaagacg
gcccctgctaaagtgaaaatcatttcaacggatcgtcgcaagaatacggctattttaagt
attacgattcatgaagggatgaatcatcaagttaagaatatgttagctgctgttggctta
cccgtttctaagttaaaacgggaaacatacggcttcttaacgttagatggtttagtttct
ggcgaataccgtgctttgaaaccaatcgaagttgcagaattcaaaaagatcgctgaatta
aatgaaaaaccaaagcataaaaacagaccaaaattgtcacgacatgactaa
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