Legionella sainthelensi: CAB17_03725
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Entry
CAB17_03725 CDS
T05293
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lsh
Legionella sainthelensi
Brite
KEGG Orthology (KO) [BR:
lsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsh03021
]
CAB17_03725 (rapA)
Transcription machinery [BR:
lsh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CAB17_03725 (rapA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Mod_r
Motif
Other DBs
NCBI-ProteinID:
AYK03087
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All DBs
Position
3648184..3651039
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AA seq
951 aa
AA seq
DB search
MTFTIGQRWISNTESKLGLGIIVDVSGRQVSLSFPAAGEERIYSTDNAPLSRIIYKEGEE
VMTSNHQKMYITHVEERQGLYFYLGVDDAGNELHISELNLDCFIKLNTPEQRLFSGLLDK
LSTFKLRIDTLNHANRLQQSQVRGLLGSRTSHLKHQVYIAHEVAQRYAPRVLLADEVGLG
KTIEAGMILHYQLYTGRANRVLIVVPQTLIHQWLVEMIRRFNLNFSIIDANRYEQLYELD
DEEGIQIGTTQENLFENEQLILCSLDFLMDNENARQQALASKWDLLVVDEAHHLHWSEEE
KSPEYECIEELSAHSKGLLLLTATPEQAGIASHFARLRLLDSSRFYDFSAFKKEEEGYQE
INKLVQALMAYGEEATIDDLSIELKSQLELYLGETIETSINQVIRDLLDRHGTGRVLFRN
TRAAIQGFPERQVLAYPLECPIIYSSLEEQKGQRKLYPEQLVEKEIWLENDPRVTWLTDK
IKELYPKKILIICAKANTAIALDQHLKLKMGIRCTSFHEGLSIIERDRAAAYFAEQENGA
QALVCSEIGSEGRNFQFAHHLVLFDLPLNPDLVEQRIGRLDRIGQRHTIMIHVPYLLNSV
QEKLFRWYHEGINLFTQSCSVGFSLYEEFENALLPILDRVATSEEELNTLITDTKMRAEE
INQALHDGRDRLLELNSCNTLQAQELISAIEAEENCLELENYMAQVFQEYGIDHEYHSEN
TEILRPTDHMKTSHFPGLKEDGVTVTYSRPKALIREDVEFLSWEHPMVSECMEMTLESEL
GNATLATISIKSIKPGTLFLESFYTVNCAAPRSLQLDRFLSLEPIRVFMDVSGKNLSKVL
DYNQLNQLCEPVKRHLCYPIIQQVHQDLEEILTQSKKIAETQLQKILEQAVVQMKSCINH
EINRLEALKKINPSIRDEEITYLKNQLVASEQLMHSATLKLQALRVVINKV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacttttactattggccaacgctggataagcaataccgaatcaaaactcggtctgggt
attattgttgatgtaagtggtagacaggtaagtttgagtttccctgctgccggagaggaa
cgcatttactctacagataatgctccgctgagccgtatcatttacaaagaaggtgaagaa
gtaatgacttctaaccaccaaaaaatgtatatcactcatgtggaagagcgacaaggattg
tatttttatcttggagtggatgatgcgggtaacgaacttcatatcagcgaacttaatttg
gattgttttatcaagttaaatactcctgagcaacgattgtttagtggattattggataaa
ttaagcactttcaaattaagaatagatactctaaatcatgcaaacagactgcaacaatct
caagtcagaggcttattaggttcgcgaaccagtcatctgaaacatcaggtttatatcgct
catgaagtcgcgcaacgttatgctccgcgcgtcttacttgctgatgaagtaggtcttggg
aaaaccattgaagcaggcatgatattgcattaccaactctatacaggacgtgccaatcga
gtgctaatcgtggtaccccaaacattgattcatcaatggctggtggaaatgatccgccgt
tttaatttgaatttttcaatcattgatgccaatcgctatgaacagctctatgagctagac
gacgaagagggcattcaaatcggaacaacccaagaaaatctttttgaaaatgaacagttg
attttatgcagcctggattttctgatggataatgaaaatgcacgtcaacaagccctggca
agcaaatgggacttacttgttgtcgatgaagcccatcatttacattggtctgaagaagag
aaaagtcctgagtatgaatgtattgaagaattgtctgcgcacagtaaaggcttacttttg
ttaacagcaacccctgagcaagcagggatcgccagtcattttgcgcgattaagattgctg
gactcctcacggttttatgatttttctgcatttaaaaaagaagaagaaggatatcaggaa
atcaataaattagtacaagcactcatggcttatggcgaggaggcaactattgatgattta
agcatagaattaaaatcacaacttgaactttatttgggtgaaacaatagaaaccagcatt
aatcaagtaattagggatttgttagacagacatggtacgggacgtgttttatttcgcaat
actcgcgcagccattcaaggctttccagaacgacaagtgcttgcctatcccttagagtgt
cctatcatttattcttcattagaagagcagaaaggccagaggaaactttatcctgaacaa
cttgtggaaaaagaaatttggcttgaaaacgatcctcgcgtgacctggttaaccgataag
attaaagaactttatcccaagaaaattctgattatttgtgctaaagccaatactgctatt
gctttggaccagcatttaaaattaaaaatgggaattcgctgcacttcttttcacgaagga
ttgtctattattgagcgtgatcgcgctgctgcatattttgcagaacaagaaaatggagca
caagcgcttgtttgttctgaaataggaagtgaaggtcggaattttcaatttgcacatcat
cttgttttgtttgatttacctttaaatcctgatttggtggaacaacgtattgggcgcctg
gatcgcataggacagcgtcatacaattatgatccatgttccctaccttttgaattcagta
caagagaaattatttcgttggtatcatgaaggaattaatttatttacccaaagttgctct
gttggtttttctctttacgaagaatttgaaaatgcacttttgcctattctagatcgagta
gcaacaagcgaagaagaactcaatacattaattaccgacactaaaatgcgtgcagaagaa
atcaatcaagcattacatgatgggcgtgatcgtttgctggagctcaattcgtgtaatacc
ctacaagcccaagaattaatttctgccattgaagcagaagaaaattgtttggaattggaa
aattacatggctcaagtatttcaagagtatggtattgatcatgaataccattcagaaaat
actgaaatcctacggcctacagatcatatgaaaacaagccattttccaggtttaaaagag
gacggcgttacggtaacttattcacgccctaaagcacttattcgtgaggatgttgaattt
ctcagctgggaacatcctatggtcagtgagtgtatggaaatgacactggaatccgagtta
ggaaacgcaactttagcgacaatttccattaaaagtatcaaacctggaacgttatttttg
gagtccttttatacggtaaattgtgcggcgcccagaagtctacaactggatcgcttttta
tccttggaaccaattcgggtgttcatggatgtttcaggcaaaaatctttctaaggtttta
gattataaccaattaaatcagttgtgtgagcctgttaaacggcacttatgttatcccatt
attcagcaagttcatcaagatctggaagagatcttaacgcaaagtaaaaaaattgctgaa
acccagcttcaaaaaattcttgaacaagcagttgtgcaaatgaaaagttgtataaatcat
gaaataaatcgacttgaggcactaaaaaagataaacccctctatacgcgatgaagaaatt
acttatttaaaaaatcaacttgtagcgagtgaacagttgatgcatagcgccactttaaag
ttacaagcattaagagtagtgattaataaagtttaa
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