Ligilactobacillus salivarius UCC118: LSL_0474
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Entry
LSL_0474 CDS
T00337
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsl03019
]
LSL_0474
Messenger RNA biogenesis [BR:
lsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LSL_0474
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABD99283
UniProt:
Q1WUQ2
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All DBs
Position
523562..524509
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AA seq
315 aa
AA seq
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MEEKKLLDFSINENMDIFVLIKSAEVRVAKNGKKFIAFNFADKSGEISAKFWNATEKEIE
EFKEGKVVRLKGKRENYQDNPQIKIFNLRIATENEPNKPEYYLQTAPESIKKIEEEINNT
FFEITNPKWNRIVRYLLNKYHDSFFSFPAAKKNHHAFSGGLAFHTVSMLRLAKAIAKEYD
VLNESLLYAGVLLHDLGKVKELSGPIATKYILEGNMIGHIVIVDEEIVKACEILQIDYNS
EEVILLRHMILSHHGLLEYGSPVRPHIMEAEVLHQIDQLDASIQMMKSSLSHTESGEFSE
RIFGLDGRNFYKPKE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaaagttattagatttttcaataaatgaaaatatggatatttttgttttg
attaaaagtgctgaagtaagagtagcgaaaaatggaaaaaagtttattgcctttaatttt
gctgataaatcaggtgaaataagtgctaaattctggaatgcaactgaaaaagaaatcgaa
gaatttaaagaaggaaaagttgtcagattaaaaggaaaaagagagaattatcaagataat
ccgcaaattaagatatttaatttaagaattgctacagaaaatgaacctaacaaacctgaa
tattatttacaaactgcaccagaatcaattaaaaaaattgaagaagaaattaataataca
ttttttgaaattactaatcctaaatggaatagaatagtgagatatttgctaaataaatat
catgatagtttcttttcatttcctgcggctaagaagaatcatcatgctttttctggagga
ttagcatttcatacagtatctatgttgaggttagctaaagcgattgccaaggaatatgat
gtattaaatgagtcattgttatatgcaggagttcttcttcatgacttggggaaagtaaaa
gagctatctggaccgatagcaactaaatatatactagaaggtaacatgatagggcacatt
gtaattgttgacgaagaaattgtaaaagcgtgtgagatattgcagatagattataatagc
gaagaagtaattttgctaagacatatgatattatcacaccatggcttgttagaatatggg
tcaccggtcagaccacatattatggaagctgaggtattacatcaaatcgatcaacttgat
gcatcgattcaaatgatgaagagttcattaagtcatacggaatctggtgaattttctgaa
cgtatttttggccttgatggtcgtaatttctataaacctaaagaataa
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