Lepeophtheirus salmonis (salmon louse): 121115845
Help
Entry
121115845 CDS
T08214
Name
(RefSeq) LOW QUALITY PROTEIN: ras-specific guanine nucleotide-releasing factor 2-like
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
RasGEF_N
PH
PH_13
IQ
PH_11
Motif
Other DBs
NCBI-GeneID:
121115845
NCBI-ProteinID:
XP_040565942
LinkDB
All DBs
Position
4:37055557..37112124
Genome browser
AA seq
1682 aa
AA seq
DB search
MSSLMMSPKMQRIQRTVRINDGQLLGLAEKARYDSRLAGFLFKRCSDSSKWLLRWFRLYQ
NLLFYYDNENTVKPIGVIFLEGCYCESRLVSLSSKTEDTGEKLYCFAIMYRRENQRQYEL
RADSINECKSWIDAIKAASFNKLRFQMGELEQKHLHLLQVVESEKTAKWQYTQHCEELTE
EIKKLRNEVSVDEXMMIXGATLWVSRYSTFFHNLFLVFQLFSLKKEWRLLPQMSKTSSQE
GRSSGNSSVEEEDPDLAKIKKVQSFFRGWLCRRRWKQIVDEYIRSPHAESMRKRNCLVFR
MVEAEEEYVEQMEILITCFYRPFKMAASSKNPPCTHDDINSIFLNSETVLFLHQIFLKGL
TARMESWPTLVLGDLFDMLLPMLSIYQEYVRNHHYCLQVLTECKQSPSFAQLLNRLEKKP
ACKGRSLEIFLTYPMHQIPRYIITLHDLLAHTPPDHVEKKSLEHARDQLEDLSRQMHDEV
SETENIRKNLAIERMIIEGCDILLDVNQVFVRQGTLIQILPSPSSSRPGRSRLNIGREKE
REAVRQCFLFSNHLIMTTRTQAGRLHLVEGTGKIPLANVTLIEDPNEDDRNDDQEYPGSG
GSLSDEGEGNTPNTGGKNNLNQNEKKDFKIIVDEYQSTQQINVHLICPTKQEKAAWITDI
SQCMDNVHFNGLFYNTLPNASSSTLPQCVKSDPSLFKDDVDIRFSKTFNTCKIPQIRYAT
PERLLQRLTDLRFLNIDFLNTFLLTYRVFTDSITVLEALKNVFNTSEPLESSSSSLSSIE
NLGEGHTQHVHHQVTSIPSTECEGKRRISTCSGYSTATANLPNVSHHPDTGTNSRHGSLT
PRRISGASSVSGYCSDERGSFSTEGGLTPHMKPQHWRYSFRRYEEEQRETTLGVSSNLQN
VEVLSRFGSGSGTGGRRKGSYDSICSGRSGSIVSTFRKESVPIIEQTEPISEMDDASSNG
TSTTEKMEEEISISHSNVSKDTQSSSSSSSSSTATSSINTDNKSLVKVKSDTGTPYLAVP
PHLAASSSAETLTDNTVTAPTSPTNMNTQIKNLTLKDDPKEKNVQKEVEEGQSSAKVSEK
HHGHQPMKRQNSFEEPSKIADLAKTMVNMPKADITLKGIADKAVEEVGLVGLAHKFTRKT
GIRTNTSSSSSGSYTTPYTFNLEEGEKDATVASSGGSTGGTSIPGSHHSSFSSTSTTRAL
FGGITFKDFKSPTREIRKKKGLFHNEFCNSGSSSISGPSGGTSQNPGSNTNTPISSPQHS
SKIGVIITSSRQANRRSSSACASIAFAVATAGSGNPSNNRSPAKKSEDFKELSKRKGSMS
SNATTMRVLSVLRHWVTKHPQDFEANPTLKSASIEFLDDINCIPSLLPAEHRASTQILRM
LTKDESDKNKMNLEEILKGTETPSKETILSLLALEIAEQMTYLDQKILFAIPCSEFLGQA
WTKKDRNIRAPNIVQMTKFFNDFSRLVCSEIISQTCLNSRIMVIEKWTAVADICRCLHNF
NGVLQICAAFTNSSVFRLKNTWNRVSKSVRHTIDKLQSLVSSDGRFRNLRDTLHRTDPPC
IPYLGMYLSDLTFIEEGTPNFTESGLLNFAKMRMIAHVIREIRQFQQTPYKIERIPKVVN
YLLDSGKLMDDEEMYQRSLMVEPRASRLSSSFGHSMAVAAATVAARHSSAQQEKDSHGTT
PN
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtctcatgatgagtcccaaaatgcaacgaattcaaagaacagtacggataaat
gatgggcagctccttggattggcagaaaaggcacgctatgattctcgcctggcgggtttt
ttatttaaaagatgttcagacagctcaaaatggcttttacgatggtttcgtctttatcaa
aatctgctattttactatgacaatgagaacactgtaaagcctattggagtcatattctta
gaaggatgttactgtgaaagccgcctagtatcattatcatcaaagacagaagatacagga
gaaaaattgtattgttttgccatcatgtatcggagagagaatcaacgtcaatatgaactc
cgagcagactccatcaatgaatgtaagtcatggattgacgcaatcaaagctgcaagtttt
aacaaattacgatttcaaatgggagagttagaacagaagcatttgcatttactccaagtg
gttgaaagtgagaaaacagccaagtggcaatacactcagcactgtgaagaactgacggaa
gaaatcaaaaagctaagaaatgaagtaagtgttgatgaantgatgatgatataaggagcc
acgctgtgggtatcgagatattcaaccttttttcataatttatttttggttttccagctc
ttttccctaaaaaaagaatggcgtctcttgcctcaaatgtccaagacaagtagtcaagaa
ggacgaagctctgggaattcaagtgtagaagaggaagatcctgacttggcaaagattaag
aaagtacaaagtttttttcgtgggtggctttgccgaagacgatggaagcaaattgtggat
gaatacattcgttcccctcatgcagaaagtatgaggaaacgaaattgtcttgtatttcga
atggtggaagccgaggaggagtatgtagaacaaatggaaatcctgatcacctgcttttat
cgaccctttaaaatggcagctagctccaagaatcctccctgcacacacgatgatatcaat
tcaatcttcctcaactctgaaacagttttatttcttcatcaaatatttttgaaaggtctc
acggcaagaatggaatcttggcctactctggttctaggggatctctttgacatgttactt
ccaatgctctccatatatcaagaatacgtaagaaatcaccattattgcttacaggtttta
actgaatgtaagcaatctccatcctttgctcagcttttgaaccgattggaaaagaaacct
gcttgtaaaggtagatccttagaaatttttctaacttatccaatgcatcagattcctcga
tacatcataactctacatgacttacttgcccatactccaccagaccatgtagaaaagaaa
tcattagaacatgctagagatcaattggaagatttgtcacgtcaaatgcacgatgaagtt
agtgaaactgaaaatatacgaaaaaatctagcgattgaaaggatgatcattgagggatgt
gacatccttttggatgttaatcaagtctttgtaagacaaggtacactaatacaaatccta
ccttctccatcttcatcaagacctggtcgaagtcgtctcaacattggacgagaaaaagaa
agagaagccgttcgacagtgttttcttttttcgaaccatttaattatgactacgcgtact
caagctggacgacttcatttggtagagggaaccgggaaaatacctcttgctaatgtaaca
ttaattgaagaccccaatgaagatgatagaaatgatgatcaagaatatccaggttcaggt
ggatctttgagtgatgaaggagaagggaatacccccaataccggaggcaaaaataatttg
aatcaaaatgagaaaaaggactttaaaataattgtggacgagtaccagtctacacaacaa
ataaacgtacatttaatttgtccaacaaagcaagagaaagctgcttggataacggatatt
tcccaatgcatggacaatgtgcattttaatggactcttctacaatacccttcctaacgcc
agctcctctacccttccccaatgtgtgaagagtgatcccagtctcttcaaagatgatgta
gatattcgattttcaaaaacatttaacacttgcaaaatccctcaaattcgttatgcgact
ccggaacgtttacttcaacgccttacggatttaagattcttaaatattgatttcttaaat
acttttttgttaacttacagagtgtttacagatagtattacagttctagaagctttgaaa
aatgtgtttaatacctcagaaccacttgaatcctccagcagctcattgagttcaattgag
aatttaggagaaggacatacacagcatgtacaccatcaggtcacttcaattccatccact
gaatgtgaagggaaaaggaggattagtacttgttccggctatagtactgccacagcaaat
ttaccaaatgtgtctcatcatccagacactggaacaaatagtcgacatggatcgttgaca
cctcgtcgaattagcggagcaagttcagtctcaggttattgctctgatgaaagaggttct
ttttctacagagggaggcctcactcctcatatgaaacctcaacattggagatacagcttt
agacgttatgaagaggagcagagagaaactactttgggagtttcgagtaatcttcaaaat
gtggaagttttatctagatttgggagtggtagtgggacgggaggacgaagaaaagggtcc
tatgatagcatctgctctggccgctctggatcaattgtctcaacatttcgcaaggagagt
gttcctattatagaacaaacagagcctattagtgaaatggatgatgcttcttcaaatggc
acgtcaacaacagaaaagatggaggaggagatatcaattagccattccaacgtctctaag
gacacccaatcatctagctcctcttcctcctcatcaacagccacttcaagtattaatact
gataataaatcactagtcaaggtcaagtctgatactggtacgccatatttggctgtacct
cctcacttggctgcatcatcaagtgctgaaacactgactgataacactgttacagcgcca
acttcacctacaaatatgaacacacaaattaaaaacttaacattaaaagacgatcctaaa
gagaaaaatgttcagaaagaagtagaggaagggcagtcttcagcaaaggtcagtgaaaaa
catcacggtcaccagcccatgaaacgacaaaatagttttgaagaaccatcaaaaatagct
gatcttgccaagactatggtgaatatgcctaaggcagacattactctgaagggaattgca
gataaagcagttgaggaggttggtttggtcggattagctcataaatttactcgtaaaact
ggcattcgaacaaacaccagttcttcttctagcggaagctatacaacgccttatacattc
aatttggaagaaggtgaaaaagatgccactgtggcgtcaagtggaggttcgactggaggt
acaagcattcctgggagtcatcattcctctttttcaagtacgtcaactacgagagccttg
tttggtggaattacctttaaggactttaaaagtccaactagagaaatccgtaagaaaaaa
ggacttttccacaatgagttttgtaactcaggaagcagctctatatcaggcccaagtggt
ggaacaagtcaaaatccaggatctaatacgaacacacccatatcttctccacaacatagt
agtaaaataggagtcatcattacgtcatctagacaagcaaatagacgatcaagttctgca
tgtgcatcgatagcatttgccgtagctacagctggatctggaaatccatcaaataatcga
tcaccagctaaaaaatcagaagattttaaagaactatctaagcgaaagggttcaatgtcc
tccaatgccacgacaatgagagttttaagtgttcttagacactgggtcacaaagcatccc
caagactttgaggcaaatcctacattaaaaagtgcttcgattgaattcctggatgacatt
aattgcattccttcactattaccagcagaacatagagcttcaactcaaattctaagaatg
ctaaccaaagacgagtcagataaaaataaaatgaacctggaggagatactcaaaggaact
gagacaccatctaaagaaactattttatccttgctggcgcttgaaattgcggaacaaatg
acttatttagatcaaaaaattttattcgccattccttgcagtgagtttttgggacaagca
tggacaaagaaagatcggaatataagagctcctaatatagttcaaatgactaaattcttc
aacgatttttcaagattggtgtgttcggaaataatatcacagacttgcttaaactcacga
ataatggtaattgaaaagtggacggcagtagcagacatttgtcgttgtttacacaatttt
aacggtgttttacaaatatgtgcagcatttacaaactcttcagtctttcgtctaaaaaat
acatggaatcgagtgtctaaatctgttcgacataccattgataagcttcaatctcttgtt
tcatcagatggacgcttcagaaatcttcgtgatacacttcatcgaacggatcccccctgt
attccttatctcggaatgtatttatcagatttgaccttcattgaggagggtactcctaat
ttcacagagagtggactacttaattttgctaaaatgcgaatgattgcacatgtcattagg
gaaatacgacaattccagcaaactccatataaaattgaaaggattcccaaagttgtgaat
tacttactggattctggcaagttaatggatgatgaagaaatgtatcaaagatcacttatg
gtagagcctcgagcctctagattatcttcttcctttggtcactctatggctgtagctgca
gcaactgtcgcagcccgtcactcttctgctcagcaggaaaaagactcacatggaacaacc
ccaaattaa
DBGET
integrated database retrieval system
