Lepeophtheirus salmonis (salmon louse): 121127778
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Entry
121127778 CDS
T08214
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsm03110
]
121127778
Chaperones and folding catalysts [BR:
lsm03110
]
Heat shock proteins
HSP100
121127778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank_2
Ank
Ank_3
AAA_5
Ank_5
Ank_4
AAA
ClpB_D2-small
Sigma54_activat
Zeta_toxin
AAA_22
AAA_14
Torsin
AAA_3
ATPase_2
nSTAND3
AAA_16
bpMoxR
NACHT
NB-ARC
SRP54
AAA_7
ABC_tran
AAA_24
Bac_DnaA
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
121127778
NCBI-ProteinID:
XP_040579195
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All DBs
Position
13:42730386..42734135
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AA seq
640 aa
AA seq
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MTEAKPYHFSYLQSPGVKKEISEGSQLSFLISINFSKNGTILTLCNLPQCNVNKSMLSRH
ILRIFGASWRRLRISPSPSRRFQGTTKALGFIVPPPVFVAFTHHDKDVDEENSSFFRSVK
LGRAIEVESRLKNGLTPNTRHSLGWTGLHVASFSGQKEVVEVLLRHGADPNAEDDFTNIY
YAGREKGMHSLDVMIRRQADFSEELNVRANFRGCSPLHYAVLSNEKNVIEVLLKGGANPF
KKNDYGKTPLDYAQGSEIKTLLKDYGKVYEETKRLKELEERRKYPLEKRMKEKIVGQEGA
ITTVSACIRRKENGWIDDEHPLVFLFLGSSGIGKTELAKQIANYLHKDNRNAFIRLDMSE
YQEKHEVAKLIGSPPGYIGHDDGGQLTKKLKEFPNAVVLFDEVDKAHPDVLTVMLQLFDE
GRLTDGKGQTIECKNAIFIMTSNLASDPIAEHALHLRSESEKINEERSKGTLEYEKLSDK
ITISRRFKEKVVQPILKKHFRRDEFLGRINEIVYFLPFSKTELVGLVERELEFWCEKAKQ
KHNVELLWDNRVLHYLTNGYNVYYGARSIKHEVERQVVSQLAMAHETEQLTKGSSVRLSI
LEDQMNPGPETDKLKVTIKKDGKKDFQDLSEPFSFSSPLN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagcaaaaccctaccacttctcttatctgcaatctccaggcgtaaagaaggaa
atttctgaaggctctcaactgtcatttttgattagtatcaatttttccaaaaacggaaca
attttaactctttgcaaccttccacaatgcaatgtaaacaaatccatgttgtcaagacat
attcttcgtatattcggcgcttcttggcgccgacttcgaatatcaccctctccctccaga
cgttttcaaggtacaactaaagccctgggattcattgtgcctcctcctgtatttgtagcc
ttcactcatcacgataaagatgtggatgaggaaaattcctcctttttccgttcggtaaag
ttgggacgtgccatcgaagttgagtctaggttaaaaaatgggttaactcctaacacaaga
cattctctgggttggacaggacttcatgtggcgtcattttctggacaaaaggaggttgtg
gaagttttgctccgtcacggggcagatcctaatgctgaagacgattttaccaatatatat
tatgctggtagagaaaaaggtatgcattcattggatgttatgattcggagacaagcggat
ttctcggaagagcttaatgtgagagcgaattttcgaggttgctctcctttgcactatgct
gttttgagtaatgaaaaaaatgtcattgaggtattgctgaaaggaggtgcaaatcccttc
aaaaagaatgattatggcaagactcctttggattatgcacaaggttcagaaattaagact
ttgctcaaggactatggaaaagtatatgaggaaacaaagcgtttaaaggaattggaagaa
agacgaaaataccctctggagaaacggatgaaagagaaaatcgttggacaagagggtgca
attacaactgtatctgcttgtattcgtcgaaaagaaaatggatggatcgatgacgaacat
cctttggtgttcttatttctaggatcatcaggaataggaaaaacagagctagctaaacaa
atagctaattatttacacaaagataaccgtaatgcgtttatccgtcttgacatgtcagag
taccaagaaaaacatgaagtagccaagttaattggatctcctccaggttatattggtcat
gacgatggaggtcaactaacgaaaaaattgaaagaatttccaaatgcagttgtcttattc
gacgaagttgataaagctcatcctgatgtgttaacagtcatgcttcaactattcgatgaa
gggagactcacagatggtaaaggacaaactattgaatgcaaaaatgctatttttattatg
acatctaatttggcttcggatcccattgctgaacatgctcttcatttgcgtagtgaatca
gaaaaaataaatgaggaacgatcgaaaggaactctagagtatgaaaagttgtctgataag
atcaccatatctcgtcgttttaaggaaaaagtcgtgcagccgatcttgaaaaaacatttc
cgccgagatgaatttctcggtaggataaatgaaatcgtgtacttccttcctttttctaag
acagaattggttggtcttgtggaaagagaactggagttctggtgtgagaaggccaagcaa
aagcataatgtagagcttttatgggacaatcgagtccttcattacttgactaacggatat
aatgtctattatggagcaaggtctataaagcatgaggttgagcgccaagttgtctcacaa
ttggccatggcacatgaaacagagcaattaaccaagggtagctctgttcgactttcaata
cttgaagatcaaatgaaccctggtcccgaaacggataaattaaaagtgactattaaaaag
gacggtaaaaaagactttcaggatttatctgagcccttctcattttcatctcctcttaat
taa
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