Lepeophtheirus salmonis (salmon louse): 121129459
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Entry
121129459 CDS
T08214
Name
(RefSeq) uncharacterized protein LOC121129459
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsm03000
]
121129459
03036 Chromosome and associated proteins [BR:
lsm03036
]
121129459
Transcription factors [BR:
lsm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
121129459
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
121129459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
zf-C2H2_4
HMG_box_2
zf-C2H2_6
zf-C2H2
zf-met
zf-C2H2_jaz
NFACT-R_1
Inj_translocase
Motif
Other DBs
NCBI-GeneID:
121129459
NCBI-ProteinID:
XP_040581123
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Position
1:complement(43429083..43434711)
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AA seq
1155 aa
AA seq
DB search
MNPNHPPYNSTNLNLLDNMLMAAGFQGTSGPEVPKPPGPMIPPGYGAYHNEMGLHHHAMN
LATSQHVQGVESIPILVYQQQQQQQQQLQQQQLQQQAAAAAAVSSQHQQHQQHPISYKLP
HHFEEMSHSTTTTSSTIAAAAAVAHHQHHHLNAKSSKKDIVAEALRSTEKIFEDKSSPHA
STPAAAAPSLPPSLPSSLPSHTNLPPIRKEPSPSLTAIKSEPCHTPPLPKSPQDIKPVLQ
SPKPPSPAITSLTTPPTNSSTLVSKPVIPYSSSTSTTLSSSSITSISTPGRRVVTSSNLK
TASISSSRSAASMTPRLSLLEEEDDGLTCRLCLQSFWYKSALIEHLKTIHSISDPVRYER
EEREKKLKRIREEQQRIAMIRRQRELRGRGRGMIARGGSAGRGGARPGSIRLTSPGSKPA
PAGPRPSFQYRDGAFICDLCKKSFSDGNDMVTHWKSHVKKSQLAASATSRGSIKFKASVR
RTTQVSRRGAPTYKSSLSSERKTKPSGGKTGKRKDKGRPRWTSYLVWSTRRRKELISAHP
GWSFAEVSRNISDQWKKVNTETKEKLQDEAEEMNATGVKKLPAEKPSSTDSDVTDTTEDS
DFEESVSKKPIMLKIKREYGEAEAPRQRSGRQRKRPSFFQEFENEENNLDRILDDFELQQ
IQESCKPKEKKEKAPTRSPRQRRAKKREAILINEPEEPIELETSRSGRIRKKIKFFDKIP
DFDDPGDLEEIDEDQDEFKPDYDEPEDHEDLIDEYSGSELNTRDESKSDSKNLPPKKRAW
KKNKKNSSSASLFKRSNIMTDAEIEEATERARKAKPIILLDREDAKPLETDDSEIGRNSL
RSSKSGVNEPTPSWIQDDEEIDHLSVKKEPNNETNVNAHVNNEIQSSQNDVTNPSDSDKE
IHSNNDESRNLGCSENQESNNHQQSIENSDTIEGGGSGDGDGGDSDAASFPKLSSDDPSN
NIDDVCLNTPMPCVPEEDDHQDPPSSILAPEEEEEKELIKPVGDNSLQRERGGGGVSVED
NSLRNVQEDLPKRSSPETIINSITEPQNASQEEILTPITTGGDPFGSMDTPSQNNEHSDN
NNPLYNQHESTNGEEEGRKKSDDNKDDNEISQSEPPPPPVDSTSVDELLRPGEDEEKYKD
LISQTQIENIDNIFN
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaatcatcccccttacaactccacgaacctgaatctcctggacaacatgttg
atggctgcgggatttcagggtacaagtggacctgaggtgcccaagccgccaggccccatg
attcctcctgggtatggggcctaccataatgagatgggactgcatcatcacgccatgaac
ttggccacgtcgcagcatgtgcaaggagtggagtcgatccctatcctggtgtaccagcag
cagcagcagcaacaacagcaattgcagcaacagcaattgcaacaacaagccgctgcagca
gccgccgtctcttcccagcatcagcaacaccaacaacaccccatctcttacaagttgccc
catcattttgaggaaatgtcccattccacgacgacgacgtcctccactatcgctgctgca
gccgccgttgctcaccaccagcaccaccatttgaacgcgaaaagttcgaaaaaagatatc
gttgctgaggcgctcaggtccacggagaaaatctttgaggataaatcctcgccccatgcc
tctacccccgccgcagccgctccgtcgcttcctccatccctcccttcctccctcccttca
cacactaatctccccccaatcagaaaagaaccaagtccatcactcacagccatcaaatct
gagccatgtcatactccacctctacccaagtctccccaggacattaaacccgttctacag
agtccaaaacctccatctccggctatcacgtctctgactacaccccctacaaacagctca
acccttgtttccaaacccgttattccctattcatcatcaacttctaccaccctttcatca
tcctcaatcacgtcaatatctacacctggaagacgtgtcgttactagttctaatcttaaa
accgcctccatcagctcatctcgctcagctgcctctatgacaccaaggctgagtctattg
gaggaagaagatgacggactcacttgtcgtctttgtctccaaagcttctggtataaatcc
gcccttatagaacatttaaaaacaattcactctatatccgatcctgttcgttatgagaga
gaggaacgagagaaaaaactcaagcgtattcgtgaagaacaacaaaggattgccatgatt
cgtagacaaagagaacttagaggtaggggaagaggaatgattgcacgaggtggctctgca
gggcgagggggtgcaagacctggttctatacgactcacttctcctggatcaaagcctgcc
cctgcaggtccacgtccaagctttcagtatcgagatggagcctttatatgcgatttatgt
aaaaagagtttcagtgatggtaatgatatggttactcattggaaaagccacgttaaaaag
tcacaattagcagcctcggccactagcaggggttcaattaaatttaaggccagtgtaagg
agaaccactcaagtatctcgaagaggagctcctacgtataaaagttcgctttcttctgaa
agaaaaactaagccttcagggggaaagacgggtaaacggaaagacaaaggaaggcctaga
tggacttcatatttagtatggtccacaagaaggagaaaagagttaatttctgctcatcca
ggatggtcttttgctgaggtatcaagaaatatatctgatcaatggaagaaggtcaacaca
gaaactaaagaaaagctacaagacgaggcagaagaaatgaatgcaacaggagttaaaaag
ctgcctgctgaaaaaccaagttcaaccgactcggatgtgactgataccacagaagactca
gactttgaggagtcggtatcaaaaaagccgattatgttgaaaattaaaagggaatacggt
gaagctgaagcacctcgacaacgaagtggacgacaaagaaaaaggcccagttttttccaa
gaatttgaaaatgaagaaaataatttagatagaatacttgatgatttcgaattgcaacaa
attcaagaaagttgtaagcccaaggaaaagaaagagaaggctccaacacgtagtccgaga
caacggcgcgctaaaaagcgtgaagcgattctaattaatgagccagaagagcctatcgaa
ctagaaacttctaggtctggtcgtattaggaagaagataaaatttttcgataaaatccct
gattttgatgatcctggagatctggaggaaatagatgaggatcaggacgagtttaaacca
gattacgatgaacccgaagatcatgaagatttgattgatgaatacagtggtagtgagtta
aatacaagggatgaaagtaaaagtgactcaaagaatcttcctcccaagaaacgtgcatgg
aaaaaaaacaaaaaaaacagttcaagtgcatccctttttaagagaagtaacataatgaca
gatgccgaaattgaggaagcaactgaaagggctcgaaaagccaaacccattatactatta
gatagggaagatgccaaacctctagaaacggatgattcagagattggaagaaactcccta
agatcctctaaatctggagtcaatgagccaacaccatcatggattcaagatgacgaagaa
atagatcatctatcagtcaaaaaagaacccaataatgaaactaatgttaatgctcatgtc
aataatgaaattcaatcgagtcaaaatgatgtaactaatccatctgattctgacaaggaa
attcattctaataacgatgaaagtagaaacctaggttgtagtgaaaatcaagagagtaat
aatcatcaacaaagcatagaaaattctgatacaatcgaaggtggtgggagtggtgatggg
gacggtggcgatagtgatgcagcatcatttcccaaattatcatcagacgatccgtcaaat
aatattgatgacgtttgtctcaatacacctatgccatgtgttcctgaagaagacgatcat
caagatccgccttcctctatactagcacctgaagaggaggaggaaaaagaactaattaaa
cctgttggagataattccctccaacgagaaagagggggaggaggggtatctgttgaagat
aattctctaaggaatgtccaagaagatcttcctaagagaagcagcccagaaactattatt
aattcgattacagagccacaaaatgcatctcaggaagagatattaacgcccataacaact
ggaggagatccattcggatccatggacactccttcacagaataatgaacattcagataat
aataatcccttatataatcaacatgagtctactaatggagaagaggaaggaagaaaaaag
tcggacgataacaaggatgacaacgaaatttctcagtcagaacctcctccaccacctgtc
gactcaacatcagtcgatgagctattacggccgggtgaagatgaagaaaagtacaaagac
cttatatcccaaacgcaaattgagaatattgataacattttcaattga
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