Fructilactobacillus sanfranciscensis: LSA_06130
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Entry
LSA_06130 CDS
T01627
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lsn
Fructilactobacillus sanfranciscensis
Pathway
lsn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSA_06130 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsn03400
]
LSA_06130 (mutM)
Enzymes [BR:
lsn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LSA_06130 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LSA_06130 (mutM)
DNA repair and recombination proteins [BR:
lsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSA_06130 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Terminase_5
Zn_Tnp_IS91
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AEN99036
UniProt:
G2KW60
LinkDB
All DBs
Position
602095..602946
Genome browser
AA seq
283 aa
AA seq
DB search
MAFMPELPEVQTVRQGLNKLVKGSKIKSVEVLYPKMINIPAEDFEKKLAGKEIIQIDRRG
KYLLFRLSDDLTLVSHLRMEGKYEVQSEGTERPKHTNVVFHLTDGRELRYKDTRMFGKMA
LVKNEDVYKLSGLNKIGPEPTEQDLKFDYMKEIMHKSHRKIKGFLLDQSKIAGLGNIYCD
EVLWLSKINPEQLTNELSDDEIRRLRANIIKEIAAAIKDHGTTVHSYSNAYGEAGQFQNQ
LHAYGRKDEKCECCGTTMEKIKVAQRGTTFCPKCQKLHGDLSD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtggctttcatgccagaattaccagaggttcaaacggttcgtcaaggattaaataaatta
gttaaaggatcgaagattaaatctgtagaagttttataccctaagatgattaatattcca
gctgaagattttgaaaaaaaattagcaggaaaagaaatcattcaaattgaccgtcgaggc
aaatatcttttatttagattgagtgatgatttgacacttgtttcccatttgagaatggaa
ggaaagtatgaagttcaatctgaaggaactgaaagacctaagcatacaaatgtcgttttt
catttaactgatggtcgtgaattacgctataaagatactcgaatgtttggaaaaatggct
ttagttaaaaatgaagatgtttataaattatcagggttaaataaaattggccctgaacct
actgaacaagatttgaagtttgattacatgaaagaaatcatgcacaaatctcatcgtaaa
atcaaaggattcttattagatcaatcaaaaattgcgggattaggaaatatttattgtgat
gaagttctttggctatccaaaataaatccagaacaacttactaatgaattaagtgatgat
gagattagaagattacgagcaaatattattaaagaaattgctgcagcaatcaaggatcac
ggaaccactgttcactcatattcaaatgcatatggtgaagcaggccaattccaaaatcaa
cttcatgcttatgggcgtaaagatgaaaaatgtgagtgttgtggaactacaatggaaaaa
attaaagtggcacaaaggggaacgactttctgtcctaaatgtcaaaaactacatggtgat
ctaagtgactaa
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