Candidatus Liberibacter solanacearum: CKC_00305
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Entry
CKC_00305 CDS
T01373
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
lso
Candidatus Liberibacter solanacearum
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lso03021
]
CKC_00305
Transcription machinery [BR:
lso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CKC_00305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF3431
Motif
Other DBs
NCBI-ProteinID:
ADR51812
UniProt:
E4UBS2
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All DBs
Position
60515..61417
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AA seq
300 aa
AA seq
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MSRRNMSIMIDGEIGLRRYIHEIKKIPMLEKQEEYMLAKRYHEHHDLNAVHKLVTSHLRL
VVKIAMGYRGYGLPISEVISEGNIGLMQAVKKFDPERGFRLATYGIWWIKAAIQEYILRS
WSLVKIGTTANQKRLFFNLRRLKGRLQAVNDTNLKPEQVVEIATKLNVSEAEVISMNCRL
SGDESLNVLMNSSDKDSSQWQDLLVYNHDSQEQTLIDKEERKNRRNMLTRSMSTLNPRER
RIFEARRLNENPSTLENLSSEFAVSRERIRQIEARAFEKVQASVQKQTESSSSALSPNSQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagaaacatgtcaataatgatagatggtgaaattgggctaaggcgctatatt
cacgaaataaaaaaaattcctatgctagaaaagcaagaggaatatatgctggcaaaaaga
taccatgaacaccatgatttaaacgctgttcacaaattagtgacaagccacctaaggctt
gttgtgaaaattgcaatgggttatcgtggttatggattacctatcagcgaagtcatatct
gaagggaatataggattgatgcaagctgttaaaaaatttgatccggaacgtggttttcgt
cttgctacatatggaatctggtggattaaagcggcaatacaagaatatattctgcgttca
tggtcattagttaaaataggtacgacagctaatcaaaaacgtcttttctttaatttgcgt
cgtctaaaaggacgtcttcaagccgtaaacgacaccaatttaaagcccgaacaagttgtc
gaaatcgccactaaactcaatgtttcagaagcagaagtaatctccatgaattgtcgttta
tctggagatgagtctctcaatgtgttgatgaattcttcagacaaagattctagccaatgg
caagatttacttgtatataatcacgatagccaagaacaaactcttatcgacaaagaagaa
cgaaaaaatcgtcgcaacatgttaacacgttccatgtctacattaaatccccgtgaaaga
agaatctttgaggcgcgacgcctgaatgaaaatccttcgacacttgagaacttatcttct
gaattcgcagtcagtcgtgaacgcatacgacaaatagaagcacgtgcctttgaaaaggta
caagcatcagtacaaaaacaaacagagtcatcttcttccgccctctcccctaattcccaa
taa
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