Lonchura striata domestica (Bengalese finch): 110471750
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Entry
110471750 CDS
T05897
Symbol
SETD1B
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr00310
Lysine degradation
lsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110471750 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110471750 (SETD1B)
Enzymes [BR:
lsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
110471750 (SETD1B)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110471750 (SETD1B)
HMT complexes
COMPASS/SET1 complex
110471750 (SETD1B)
COMPASS/SET1 complex (yeast)
110471750 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
110471750
NCBI-ProteinID:
XP_021388378
LinkDB
All DBs
Position
15:complement(11253864..11296700)
Genome browser
AA seq
1977 aa
AA seq
DB search
MENSTQASTSVEKRNHHWRSYKLIIDPALKKGQHKLYRYDGQHFSMPNSGIAPVDCVRDP
RIGRIWTKTKELELSVPKFKIDEFYVGPVPPKQVTFAKLNDNIRENFLADMCKKYGEVEE
VEILYNPKNKKHLGIAKVIFATVKGAREAVQHLHNTSVMGNIIHVELDTKGETRMRFYEL
LVNGLYTPQTLPVGTEQDVSPTGNEALQLTDSLKRLKDSSLSSAGSSVTPNSSTPFSHDT
AYSSCRQDTPNSYSQFTPQSQGTPHTPRLGTPFSQDSTYSSRQTTPVYHFGQDSGYKPRR
HETKFTDAYNRRPGHHYMHNSAGVFRGTEHQFSTFKSHQQEPVQFSHTPPLSHSSSSSYK
SAFSPYQAPAVFPQSDEQPFPQTSRETEYRRPAPPPTEMLVESSAAPSIDFVPVKEKPEE
PPPLPDSNAVPEPSTASFSQTPERSETPGTPTMETEMQHNSLDSRIEMLLKEQRTKLPFL
NEHDSDNEIRMEGSPISSSSSQLSPIPTYGSNSQPGFRGQTPSSRPSSTGLEDISPTPLP
DSDDDEPIPGTAPLSQNSRGTSEASMTPIDQLSRTSKIETSEAKEMVPGDQTPTSEKMDE
GQHSSGEDMEISDDETNPAPITSAECAKTIVVNSSVSNTAVMAPSIPPLPPPGFPPLPPP
PPPQPGFPMPPPLPPPPPPTHPAVTVPPPPLPAPPGVPPPHILPPLPPFHPGMFPVMQVD
MISVLGNQWGGMPMSFQMQTQMLSRMMQAQNTYQYPPFMTGRMQFVNLPPYRPFSMGAAL
ARGQQWPPLPKFDPSVPPPGYEPKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVV
AFRAFDDWWDKKERLAKASLTPVKSGGELEEKPKPKDRMASCLLENWNKGEGLGYEAIGL
GIGLRGAIRLPSFKVKRKEPPEAASAGDQKRIRPSTSVDDEDEESERDRDASDTTSDLSK
KDAEAVGLRRRPARPLELDSEGEEGDETSGKEEESSSEKEEEQEEDGGLVKAAPGKEEEE
DEEDEDDEDEDDDEDEDEDDEEETGIDTSDKEEEQDSEEDVASPSSSKAEAESSDESEDS
SEFESSSDSDDEDEEDDDDDDEDEEEEEEEEVAEDQGREAMVAEPEHEPASHELPDDERE
TILDLYPVDDYMDATGLGLAEPALAVKDEGNEEIKAGENECGQVLGASVAAETLKHLVME
RDQETKLALSPICRPEEESEPTSMLEPEVQECPKPESQDEEAAFCISAPGAVFGEPLPSK
SSFFGQSEESSLEARVKAKLPSAAEEDERLPRTPGREVMIHSETETLLLPAHKVPSSMLP
LPSTPGKEESLVPPEKFPEQLMVTKTSVEEEIPRTPGRDILAKSSHPLAKSQSTDTVPAT
PGSDAPLTGSSLTLSSPQVPGSPFSYPSQSPGINSGIPRTPGRDFNFTPTFPEAGATIPC
LLPGKKQSEEELEEKTFKEPLGASLTISMNSVPSPIPFASPPQADFHMDMGLPPDEPIPV
AALPCMHGDGTMPIEECKAEVKPVLLSPEVPPGASILPPPPPPSVLPKRRPGRPRRSPPS
VLSLDVYSGKTIEPPPMPVALVEGAVGKELLSGHPDAYYGLKDPEAVTLDFRNDGFHEKI
AAETVAEKLPFKELENQWNEDFKEEEAHAKPKRQWRRQKKTSEELPAIPSPEYSPPRPQF
RPRSEFEEMTILYDIWNGGIDEEDIKFMCITYDRLLQQDNGMDWLNDTLWVFHPSTSFST
PKKKKRDDGMREHVTGCARSEGYYKIDKKDKLKYLNNSRAFAEEPPADTQGMSIPAQPHA
STRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLFAMEPIAA
DEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCN
PNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagcacgcaagccagcacttctgtcgagaaaagaaatcaccattggagaagt
tacaagttgattattgacccggctctgaaaaaaggacagcacaaactctaccgttacgat
gggcaacatttcagcatgcctaactcggggatcgctcctgtggattgtgtcagggatccc
agaatagggcgaatatggaccaaaactaaggagttggagctgtctgtccccaaattcaag
attgatgaattttacgtggggccagtgcctcccaagcaggtcacctttgccaagctgaac
gacaacatccgtgaaaactttctggccgacatgtgcaagaaatacggcgaagtggaagag
gtggagattctctacaaccccaagaacaagaagcacctgggcattgccaaagtcatcttt
gccactgtcaagggtgcccgggaggctgtgcagcaccttcacaacacttctgtcatgggc
aacatcatccacgtggagctggatacaaaaggtgaaacccgcatgagattctatgaactg
ctggttaatggtctttacactcctcagaccctccctgtaggcaccgaacaggacgtgtcc
ccaactgggaatgaagctctccagttgacggactccctgaagcgcctgaaggacagttcc
ctttcttccgcaggatcctccgttaccccaaacagcagcacgcccttttcccacgacact
gcctattccagctgccggcaagacaccccaaactcctacagccaattcaccccacagtcc
caaggaacaccccacaccccgcgcctggggacaccgttctcccaggattccacctactcc
agccgacagaccacacctgtgtaccattttgggcaggacagtgggtacaaacccaggaga
cacgagacaaaatttacggatgcgtacaaccgtcgcccgggacaccactacatgcacaac
tcggcaggggtgttccgaggcactgagcatcagtttagtacattcaaatcccatcagcag
gagccagttcagttctctcacactcctcccctgagccactctagttcttcaagctataaa
tctgccttctccccctatcaagcaccagctgtttttccccaatctgacgagcagccgttt
ccccaaacttccagggagacagagtaccggagacctgcaccacctcccaccgagatgctt
gtggaaagcagcgctgccccgagcatcgattttgtcccagtgaaggagaaaccggaggag
cctccgcccttgcccgactcgaacgctgttccagaaccgagcacagcatccttctctcag
actccagagaggagcgagacccctggcacccccaccatggagactgagatgcagcataac
agtttagactcaaggattgagatgctcttaaaagagcagagaacaaaattaccctttctt
aacgagcatgactcagataatgagatccgaatggaaggtagccctatttcctcctcttct
tcccagctctcccccatcccaacatacggttcgaactctcagcctggtttcaggggtcag
acgccttcctcgcgcccttccagcacaggtttggaggacatcagccccacacccttacct
gactctgatgatgatgagcccatacctgggacagctcctctgagtcagaattcccggggg
acatcggaggccagcatgactcccattgatcagctgagcaggacctccaaaattgagacc
tcggaggctaaagaaatggtgcctggtgaccagactccaacatcagaaaaaatggacgag
ggtcagcattcctcaggggaggacatggaaatctctgacgacgagaccaaccctgcgccc
atcaccagcgcggaatgtgccaaaaccattgtggtgaactcctccgtcagcaacacggcc
gtgatggccccgtccatccccccgctgccaccgccgggattccctcctcttcctcctccg
cctcctccacagccgggcttcccgatgcccccgccgctgcccccgccgccgccgcccacc
cacccggccgtcaccgtgcccccgccgccgctgcccgccccgcccggggtccctccgcct
cacatcctgcccccgctgcccccgttccaccccggcatgttcccggtcatgcaggtggat
atgatcagtgtcctgggcaaccagtggggtggcatgcccatgtccttccagatgcaaact
cagatgctgagccgcatgatgcaggcacagaacacgtaccagtacccacctttcatgacg
ggccggatgcagtttgtgaatctccctccctaccgcccgttctcgatgggagccgctctc
gcccgcgggcagcagtggccgcctctgcccaagtttgacccctcggttccacccccgggc
tatgagccgaagaaggaagatccccacaaagccacggtggatggagttctcctggtcata
gtgaaggaactaaaggccatcatgaaaagggacctgaatcgcaagatggtcgaagtggtg
gcgttccgggcgtttgatgactggtgggacaagaaggaacgtctggcaaaagcgtctctc
actccagtgaagtctggaggagagctggaggagaagccaaagccgaaggatcggatggcc
tcttgtctcctggagaactggaacaaaggagaagggctgggctacgaggccattggcctg
ggcattggcttacgaggggccatccggctgccatccttcaaggtgaaaagaaaggagcca
cctgaagctgcctcagcgggagatcagaagagaatccggccttctacatctgtggatgat
gaagatgaagagtcggagagggacagggatgcttctgacacaacatctgacctgtcaaag
aaggatgcagaggcagtggggctgcgacggcgaccagcaaggccattggagctcgacagc
gagggagaggagggagatgagacatcagggaaagaggaagagtcctcctcagagaaggaa
gaggagcaggaagaagatggaggcttggtgaaagcagcacctggcaaggaggaagaggag
gatgaggaggatgaagatgatgaggatgaagatgatgacgaagacgaggatgaagatgat
gaggaggagacaggcatagacacaagtgacaaagaggaggagcaggactccgaggaggat
gtagcaagtccctcgtcttccaaggctgaagctgaatcatctgatgagagtgaggactcc
tctgaattcgagtcaagttcagactcggatgatgaagatgaggaggatgatgatgatgat
gatgaagatgaggaagaagaagaggaggaagaggtggctgaagatcaaggcagagaagcc
atggttgctgagccagagcatgaacctgctagtcatgagcttcctgatgatgagagggag
actattttggacctgtatcctgtggatgactacatggatgcaacaggcttgggacttgcc
gagccagctttggcagtgaaagatgaaggcaatgaagaaatcaaggcaggggaaaatgag
tgtggccaagtcctgggagcttctgttgctgctgaaactctgaaacatttggttatggaa
agagaccaggagacaaagcttgcactctctcccatctgtaggccagaggaagagtctgaa
cccacttccatgctggagccagaagtacaggaatgtccaaagcccgaatctcaagatgag
gaggcagctttctgtatctctgctccaggggcagtctttggagaacctctgcccagcaaa
agcagcttctttggccagtctgaggagagcagcttggaggcccgagttaaagccaagctg
ccgtcggcagcggaggaggacgagcggctgccccgcacgcctgggcgggaggtgatgatc
cactcggagactgagactctcctgctgccagcccacaaggtgccatcctccatgcttccc
ttgccatcaactcctggcaaagaagaatctttagtccctccagaaaagttccctgaacaa
ttaatggtgaccaaaacatccgtggaagaggagattcctaggactcccgggcgggacatt
ttggccaagtcttcacaccccctcgcaaagtcgcagagcacggacactgttccagccacg
ccaggaagtgatgctccccttacaggaagcagcttgaccctcagttcccctcaagttcca
gggagccccttttcctacccatcccaatctcctggcattaatagtggcattcctcggact
cctgggagagatttcaatttcacgcctactttcccagaggctggtgctaccattccttgc
cttctgcctggcaagaaacagtcagaggaggagctcgaagagaaaacctttaaagagcct
cttggtgcttcccttacgatcagcatgaacagtgttccttcccctatcccctttgccagc
cccccgcaagctgatttccacatggacatgggtttgccacctgatgagccaatacctgta
gcagccctgccgtgcatgcatggagatggaacaatgcccatcgaggaatgcaaggcagaa
gtaaaacctgttttgctctccccagaagtaccccctggggcttctattcttcctccccca
ccaccaccttctgttcttcccaaaaggaggccgggtcggccgaggcggtccccaccttct
gtcctctcgctggatgtgtactcaggcaaaaccatagaacctcctcccatgccagtggcc
ttggtggaaggtgctgtgggcaaagagctgttgagtggacatcctgatgcctactatgga
ctgaaagaccctgaagctgtcaccctggacttcaggaatgacggtttccacgagaaaata
gcagctgagaccgttgcagagaaactgccattcaaggaactagagaaccagtggaatgaa
gacttcaaggaagaagaagctcacgcaaaacctaagcggcagtggcggaggcagaagaag
acatctgaggagctgccagcgatcccttcccccgagtactccccgccccggccgcagttc
aggccgcgctccgagtttgaggagatgaccattctgtatgacatctggaacgggggcata
gacgaggaggatatcaaattcatgtgtatcacatacgaccgcttgttacagcaggacaat
ggtatggactggctcaatgacaccctgtgggttttccatccttctaccagcttttctacc
cccaagaagaagaagcgggatgacgggatgcgggagcacgtgacgggctgtgcacgaagc
gaaggctattacaaaattgataagaaggacaaactcaaatacctcaacaatagccgagct
tttgcagaggagcctccagctgacacacagggtatgagcatccctgcccaacctcatgct
tccacccgggctggttccgagaggcgatcagagcaacgcaggctcctctcctccttcact
ggtagctgcgacagtgacctgctcaagttcaaccagctcaagttccggaagaaaaaacta
aaattctgcaagagccacattcatgactggggcctttttgctatggagcccattgcagct
gatgagatggtgatcgagtacgtgggtcagaacatcaggcaggtcattgctgacatgcgt
gagaagcgatacgaggacgagggcatcggcagcagttacatgttcagagtcgaccacgac
accatcatcgatgccaccaaatgcgggaacttcgccaggtttatcaatcacagctgcaat
ccaaattgttatgctaaagtgatcacggtggagtctcaaaagaagatcgttatctactcc
aagcagcacatcaatgtgaacgaggaaattacctacgactacaagtttccaattgaggat
gtaaaaatcccgtgtctctgtggctctgagaactgcaggggaaccctgaactga
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integrated database retrieval system
