Lonchura striata domestica (Bengalese finch): 110477640
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Entry
110477640 CDS
T05897
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110477640 (SEC16A)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110477640 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
110477640
NCBI-ProteinID:
XP_021399275
LinkDB
All DBs
Position
17:8920809..8943567
Genome browser
AA seq
2427 aa
AA seq
DB search
MQQPPQPVPAGAAPPPPAGVARNLYWRNSPLGKRANAAAAPVQPVTDPFAFGRQTPQGSP
LENPPKGSAPAFPQPAPVHPPPARAGDSPHGPHSSLSAPGSQAGISTSSFSSLPVPPPSL
GYVLNSAAEGHPNADLGLRGAAVPLHYNPGAAVENSFSVHPGMVSAANKPGARQDVGRDP
NDAAAAPNTAALFPPPPQQPGPQWRPVPGNLQSPVRNFVPYPEPSPQTDIHNVSQPSVST
SHPPPHANVPQGPGHQGIPQNIVQAPLSSGCEKNGKNGPANSSHHMNSIQPGNVFRQNAE
MTNPWSNQPYQEQFYPQPPLQGSGFVLPTAQENNPKNQSPAMSEMSNRSIPTDRDPGTLS
MFFKGDEAENEEILSSEKKYVMEKTEFDARQQNSASLYHQPVHPQQVATNILSQAQLGTV
GEMVQKGMDVQYFPKLVSHQEAQAAKHSLFAGDGKAQVGDAAAGSQYENVENLECIQNQE
VLPSEPQNIKASSPAAGPDPYRYGSFPGQMLPKNAAVSHAEGGPNLEAPDSLPHPVRPDS
VSSNYSSVSLRSTSSSARPPEQVGTFIQQEIGKPDEESSASFFKQIDSSPLGGDSGELNL
SKSYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQAKMVVELRENHS
NQKNIKKNTAVPAASPGNLEQPPDNLETIYMPQVHPGPLAGVGEAGNTLHSGPVVENVQS
VSERRPSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVPAKQTVEVIQPP
EEGLSNQQPCKPGTIAVQHSQDGNIAFENLENPPKMGEEEALQSQASSGYASLLSSPPTE
SLQNQPILIAQPNQSYNLAQPINFSISLSNQLSNNENNQPMKDSGVGDKPAMSPQSSHAG
GENMPLPVMQVGSLLVNALPNTNLLKHNLLQSPVNSSDAASNQPANLLMKTPLNLTPEGQ
KNVNREGLVPEFASKPGSNSSVSPGTNLPSGSASGLVPPVNSIAQPNNSANQSSSKEAAG
ALDFTVPRTLEKSSTSNSVQVHNQSPSGAPVQQAAGGAGQARPEVPDKQHFYQQVTKDVQ
HQAAADRAAQGALPPQPQMQAAQMQPPTSGQSSVPPDSQISTGAEGMQQGENQVLGSHPQ
PGGPQEAGSAQPRYEQMSPGKQPVSEQPPGAPAATAPPATTAQAVPPNGQQDLQRPPPAQ
TPQEAFGPPQNPYYYYRHPYDAYQAPYPPPYPPADPRTAAHLYYMEDSYGQYDPRYRHYD
SNTAYMEPGSYRYPEPERPSSRASHCSDRPSSRQGYTEDYYGKGGWSDYYSGYYPNSYDY
GDPSRWERYPYDPRYRDPRSYDQRYWYDAEHNPYQKREAYPYGSRNERYEDNWRYDPRFT
GSFDDDSEPQRDPYGDEFERRSVHSEHSGHSLRSSRSVHSHHSSFSSRSQQSQLYRSNHD
LTGSAYETPAQAVPLHPDYPYGGYDPSFDGQQPFTDYGYPAETGWSTVEQAPLRPSTPEK
FSVPHICARFGPGGFLIKALPNLPSEGQPALVEIHSMETMLQHSPEQEEMRAFPGPLAKD
ETHKVDVINFAQSKAAQCFKNENLIDKESASLLWDFIVLLCRQNGTVVGTDLAELLLRDH
KTVWLPGKSPNEANLIDFTNEALEQVEEESGEAQLSFLTDNLVTTVDSFEKETERFRELL
LYGRKKDALESAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGR
MPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLESRTIATMGDTLASKGLLDAAHFCYLM
AQVGFGVYTRKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSLGSQPGCLPNFQVF
KFIYACRLAEMGLAAQAFHYCEVISRTVLKDPHYYSPVLIGQLIQMSSQLRLFDPQIKEK
PEQESFIEPSWLVTLRHVDGQIKEGAIAYNTDRSTPPPYECSTPSSELDRASQCDGAGGR
DMGPGAENPLLASLLPNMAQQMQSVQLMPSVPQAVLDGSAAMIPPGDQGSVPFYPVAPQP
LGPGPGFAPQGFSNPYGNEPSPLYLGTTLPPGGPPQEIEPQPEEQTNLETGMQRIAPESP
SQNSFPEQREDDFYGRMANMGYGRRSRTTSESSAHSVGRERSNSAAKQPSPPPSAPAGKE
SKKETKKEAAPRKTGGTWFRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESK
PPPPPPTGFPKAAQAAPPGPGGPPGASVNVFSRRAAGSRARYVDVLNPGGTKASGAVPAP
SDLFAPLAPMPIPANVFVPNSVPGESQPVEGSGAAEHTPAANQTNTDPAAAVEPEYLNPA
ALPPGSGLHVPNPDGSQSGELSRSSSMSSLSREVSQHFNQPATVPPSGAPSAGAVPFYNP
SQFAQSPAATGSSRLGRIGQRKYPTLK
NT seq
7284 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccaccgcagcccgtccctgccggggcggctcctcctcctcccgccggcgtg
gcccgcaacctgtactggaggaacagccccctcggcaagcgggcaaacgccgcggctgcg
ccggtgcagcccgtgacagacccgtttgccttcggcaggcaaaccccccagggctcccct
ttggagaacccacccaagggcagcgcgccggccttcccgcagccagccccggtgcatccg
ccgcccgcccgcgccggggacagccctcacggaccacacagctctctgtcagcgcccggc
tctcaggcaggcattagcaccagtagcttttccagccttccagttcctcctccgtccctg
gggtatgttttaaatagtgctgcagaagggcatcccaacgccgatctcggactccggggg
gctgcagtgccgttgcattataacccaggagcagcagtggaaaattctttcagtgtgcat
cctggaatggtgtctgcagcgaacaaacctggagctaggcaggatgttggcagagatccc
aatgatgcagctgcagcacccaacacagcagcactcttcccaccacctccccagcagcct
gggccccagtggaggcctgtcccagggaatctgcagtctccagttcggaattttgtgccc
tatcctgagccgtctcctcagactgacattcataacgtttctcagccttctgtcagcact
tctcaccctcctcctcacgcaaatgtcccgcagggtcctggacaccaaggtattccacaa
aacatcgtgcaagcgcctttatcctctggttgtgagaagaatggcaaaaatggccctgca
aacagcagtcatcacatgaacagcatccagcctggaaatgtgtttaggcagaatgcagaa
atgactaacccttggtcaaaccaaccttaccaggaacagttttacccacagccacctttg
caaggctctggttttgtcctccccacagctcaggaaaacaaccccaaaaaccagtctcca
gctatgtctgaaatgtcaaatagatctattcccacagatcgagatccaggaactctctcc
atgtttttcaaaggggatgaggcagaaaatgaagaaatactttcatctgaaaaaaaatac
gtaatggagaaaacagagtttgatgcccgtcagcaaaattcagcctccctgtatcaccag
cctgtgcatcctcagcaggtagcaaccaatattctctctcaggcacagctgggtacagtt
ggtgagatggtacagaaaggaatggatgtccagtacttccctaaacttgtcagtcatcag
gaggcacaggctgctaagcactctctgtttgctggggatggcaaggcacaggtaggtgat
gcagctgctgggtcccagtatgaaaatgtggagaacctggagtgcattcagaatcaggaa
gtgcttccaagtgaaccacagaacatcaaggcttcatcccctgctgctggtcccgatccg
tacaggtacgggtccttcccgggtcagatgcttcccaagaatgctgctgtgagccatgct
gaaggaggaccaaacctggaggcacctgactccttacctcaccctgtccggccagacagc
gtctcctccaactacagcagcgtcagcctcaggagcacctccagctcagcacggccccca
gagcaggtcggtacatttatccagcaggaaattgggaagcctgatgaggaatcctctgcc
agcttcttcaaacagattgactcctctcctctgggaggtgattcaggtgagctaaacctg
agcaagagctaccacggcaatctgtcccagcctcccactccaagtcctcctaagcctaca
ggagtgtttcagacaagtgcaaatagttcttttgaacctgtgaggtcccatggagttggt
ataaaacctgcagagattgaccaagctaagatggtggttgaattaagagagaaccactca
aaccaaaagaatatcaagaagaatacagcagtacctgctgcatcccctggaaatcttgaa
cagccaccagataatctggaaaccatttacatgcctcaggtacacccagggcctcttgca
ggcgttggggaggctggaaacacgctgcactctggacctgttgtggaaaatgtacaatca
gtatctgagagacggccctcaaccagagctcagggagcagttaagaagtgtgatagccca
gcaacgactttatgggctcacaatgagttaccaaattttgggggaaatgttctcctagct
cctgctgctcctgcagtgtacgtacctgccaaacagactgtggaagtcattcagccacca
gaggaaggcctgtctaatcagcagccgtgtaaaccagggactattgctgtgcagcactct
caggatggaaatatagcttttgaaaatcttgagaatcctcccaaaatgggagaagaggaa
gcacttcagtctcaggcaagttctggttatgcaagtttattgtcttctccacctacagag
tctttgcaaaatcagcctatcctgattgctcagcctaatcaaagctataacttggctcag
ccaattaatttttctatttctctatctaatcagctaagcaacaatgaaaacaatcagcca
atgaaggactctggagttggggacaagcctgcgatgagtccccaaagttcacatgctggt
ggggaaaacatgccgttacctgtgatgcaagttggatctctcttagttaatgcacttcca
aatactaatctgttaaaacataatttattacaaagtcctgttaattcttctgatgctgct
tctaatcagcctgcaaacttgcttatgaaaactcctcttaatttgactccagaagggcag
aagaatgttaatagggaaggccttgttcctgaatttgctagcaagccagggtctaactca
tctgtttctcctgggacaaatcttcccagtggaagtgcaagtggcctagtcccccctgtt
aattccatagcacagcctaataattctgcaaatcaatcaagtagcaaagaagctgctgga
gcgctggacttcacagtgccacggacgttggagaaaagcagcacaagtaattctgtccag
gtgcacaatcagtcaccctctggtgctccagtccaacaggcggccggtggtgctggtcag
gcgcgtcccgaggtgcctgacaaacaacatttctatcaacaggtgacaaaagatgtgcag
caccaggctgcagcagaccgagctgcacagggagcgttgccaccccaaccacaaatgcaa
gcagctcaaatgcagccaccgacatctgggcagtcctcagttcctccagactcccagatt
tccacaggggctgaaggcatgcagcagggggagaaccaggtgctgggtagccatccccag
ccaggggggccccaagaggctggttcagcccagccaaggtacgagcagatgagtcccggg
aagcagccggtgtcagaacagcctccaggtgctccagctgccacagcccctcctgccacc
actgctcaggcagttccacccaacgggcagcaagacctgcagcgtccaccccctgctcag
acccctcaggaagcctttggtccaccccagaacccttactactactacagacatccttac
gatgcttaccaggccccatatccaccaccttatcctcctgcagaccccaggacagcagct
cacctttattacatggaggacagctacgggcagtacgacccccggtaccgacactacgac
agcaacactgcctacatggagcctgggagttaccgctaccccgagcctgaacggcccagc
tccagggccagccactgctctgacagaccttcctccaggcaagggtatacagaagattat
tatggaaaaggtggatggagtgattattattcaggctattacccaaactcctatgattat
ggagatccaagtcgctgggaacgatacccgtatgaccccaggtacagagacccgagaagt
tatgaccagaggtactggtatgatgctgaacacaacccttaccagaagagagaagcatat
ccatatggcagcaggaacgagcgatacgaggataactggaggtacgatccccgcttcacc
gggagctttgacgacgactcggagccgcagcgggatccctacggggacgagtttgagcgg
cgcagtgtccacagcgagcactcgggccacagcctgcgcagctcccgcagcgtccacagc
caccacagcagcttcagctctcgctcccagcagagccagctctacaggagcaatcacgat
ctaacgggcagtgcctatgaaactcctgcacaggcagtgcccctgcacccagattatccc
tacggaggctatgatcccagctttgatggacagcagcctttcacagactatggctaccct
gctgagacaggctggtcaactgtggaacaagcacctttaaggccctcaacacctgagaaa
ttttcagtgcctcatatctgtgccaggtttgggcctgggggcttcttaataaaagcactg
ccaaacctgccttctgagggtcagccagctctggttgaaatccacagcatggagactatg
ttacaacattctccagagcaagaagagatgagagcctttcctggtcctcttgctaaggat
gagacccataaagtggatgttattaattttgcacaaagtaaagctgctcagtgctttaag
aatgaaaatttaattgacaaagaatctgcaagtcttctttgggactttattgtactgttg
tgcaggcagaatgggactgttgtgggaacagacctggctgaacttctgctccgagatcac
aaaacagtgtggcttcctgggaagtcccctaatgaggcaaatttgattgatttcactaat
gaggctttggaacaagtggaagaggaatctggtgaagcccagctctcatttctcactgat
aatcttgtaaccacagttgacagttttgagaaggagactgagagattcagggagttgctg
ctttatggccgtaagaaagatgctttggagtctgccatgaagcatggtttgtggggtcat
gctctgctccttgccagcaaaatggacagcagaacacatgctagagtgatgaccagattt
gccaacagtctcccaattaatgaccctctgcagactgtttaccagctcatgtctggaagg
atgccagctgcatccacgtgctgtggagatgagaaatggggagactggaggcctcatctg
gcaatggtgttatccaacttgaccaataatgtggacttggaatccaggaccattgcaacc
atgggagacactcttgcttctaagggtctgctggatgctgctcatttttgttaccttatg
gcccaagttgggtttggagtttacacaaggaagacaacaaagcttgtcctaattggatca
aatcacagcttgccatttttaaagtttgccaccaatgaagccattcaaagaacagaagcc
tatgagtatgcacagtcactaggaagtcagcctggctgcttgcccaatttccaggttttc
aagttcatctatgcctgtcggctggctgagatgggccttgctgcccaggctttccactac
tgcgaagtgatttccagaactgtcctcaaagatccacactactattcccctgtgctgatt
ggccagctaatccagatgtcatcccagctgcgcctgtttgaccctcagataaaagaaaag
ccagagcaggaatcttttattgaaccttcctggttggtgacacttcgacatgtggatgga
cagatcaaggagggtgcaatagcctataacacagatagatccactccccctccctatgaa
tgcagcactcccagctctgaactggaccgtgccagtcagtgtgatggggcaggtggccgt
gacatggggccaggtgctgaaaatcccttgctggcatccttgttacccaatatggctcag
cagatgcagagcgtgcagctgatgccttcagtacctcaggctgtccttgatggctcagct
gccatgattcctcctggtgaccagggaagtgtccccttctacccagtggctcctcagcct
cttggcccaggacctggctttgcacctcaaggattttcaaatccctatggaaatgaacca
tccccactatatttagggacaacactacccccaggagggccaccacaagaaatagaacca
cagccagaagagcagacaaacctggaaacaggaatgcagagaattgccccagagtctcct
tcacaaaactccttccctgaacagagagaggatgatttctatggcagaatggctaacatg
ggctatgggcgaaggtcccgaacaacctcagagtcctctgctcattctgtgggacgagag
agatccaactctgcagcaaaacaaccttctcctcctccctctgctcctgcagggaaagag
agtaaaaaagaaacaaaaaaggaggcagcacccagaaagactggtggaacctggtttcgg
tggctgatgggaaaaggcaagaatgaggctcacctgccagatgacaagaataaatcaatt
gtttgggatgagcagaaacaacgttgggtaaatctggatgaaccagaagaagagagtaaa
cctcctccaccacctccaacaggatttcctaaagctgctcaggctgctccccctgggcct
ggaggcccccctggtgcctctgtcaacgtgttctccaggagagcagctgggagcagagcc
cgttatgtggatgtcctgaatccaggaggaaccaaggcaagtggtgctgttcctgcacca
tcagacctgtttgcccccctggcacctatgcccattcctgccaacgtgtttgttccaaac
tcagttccaggggaatcccagcccgtggaggggagtggagcagcagagcacacaccagct
gcaaaccaaaccaacacagaccctgctgcagctgtggagccagagtacttaaaccctgca
gcccttcctcctggatctggacttcatgttcctaaccctgatggctcccagtcaggcgag
ctttcgcgctctagttcaatgagttcattatcacgtgaagtaagccagcattttaatcag
cctgccactgttccaccctcgggggcaccttcagcaggggcagtaccgttctacaacccc
tctcaatttgcacaatctcctgcagccactggaagttcaagactgggaagaattggacag
aggaagtatccaacactgaagtag
DBGET
integrated database retrieval system
