Lonchura striata domestica (Bengalese finch): 110478366
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Entry
110478366 CDS
T05897
Symbol
USP45
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 45
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110478366 (USP45)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110478366 (USP45)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110478366 (USP45)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110478366 (USP45)
Peptidases and inhibitors [BR:
lsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110478366 (USP45)
Ubiquitin system [BR:
lsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110478366 (USP45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
THOC7
Motif
Other DBs
NCBI-GeneID:
110478366
NCBI-ProteinID:
XP_021400613
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All DBs
Position
3:72768498..72817319
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AA seq
817 aa
AA seq
DB search
MRVKDPSRTNPEKPKRSKRPNRPQDEDSSDDISGLTCQHVSQAVDMHHVKRAVAQSVWSI
CAECLKERRVSDGEPRAPSDIWLCLKCGSQGCSKNSEGQHSLKHFQTARTEPHCIVINLS
TWIIWCYECDEELSTHCNKKVLAQIVDFLQKHGARAEPSSSKIIRLREENSETSEILKGK
TSGNGASVPVKGINNLGNTCFFNAVMQNLAQTHVLNELMYEIKEKGTKLKICHTSDSQLD
PLVVNLSSPGPLTSAMFLFLHSMREAGKGPLSPKVLFSQLCQKAPRFKGFQQQDSQELLH
YLLDAIRIEETKRIQTGILKAFNNPTTKTADEETRRKVKAYGREGVKMNFIDRIFVGELT
STVMCEECENISTVKEPFIDLSLPIIEERVAKPVPLGRTGKSKSVQEADLGQYNCSSIGT
LNNQPKIVKKHTLTKDKNQLNHERRLARKASSKEEERSPVIMQEKAKKLELEGSSGIVYS
KDPCAEAAVNGSQTEGSEKEASRSESSFDADSEASESESASKQTTLSPPSSVSGVHINHL
NPKTPHSKPSDSNEEMISSAVSKLSFCDPVNEDKKSSCGDPALGLSNNSMFSVGKSSLSQ
NPQNAFQTLSQSYITSSKECSVQSCLYQFTSVELLMGNNKLLCESCTERKQKYQKKTNST
EKKMEGVYTNARKQLLISSVPAILILHLKRFHQAGLSLRKVNRHVDFPLILDLAPFCAAS
CKNVMDGARVLYSLYGIVEHSGSMRGGHYAAYVKVRTSSKKLLEHISTTKTVLGLKEAMG
ASGGQWVYVSDTHVQMVPESRVLNAQAYLLFYERLLL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgaaagatccatcaagaaccaaccctgagaagccaaagagaagcaaaaggcct
aacaggccacaggatgaggactcttcagatgatatttcagggctaacgtgccagcacgtg
agccaggcagtggacatgcaccatgtgaagagggcggtggctcagagcgtgtggtcaatc
tgtgcagaatgcctgaaggagaggcgggtgagcgatggtgagcccagggcgccttcagac
atctggctgtgtctcaaatgtggctcccagggctgtagtaagaactcagaaggccagcat
tctctgaaacacttccaaaccgcacgcacagaacctcattgcatcgttatcaacctcagc
acatggatcatatggtgttatgagtgtgatgaagagctgtcaacgcattgcaacaagaag
gttctggcacagatagttgacttccttcaaaaacacggtgccagggctgaaccaagttca
tcaaaaatcatacgtcttcgtgaagaaaacagtgaaacaagtgaaatactgaaagggaaa
acctctggtaatggtgcatcagttccagttaaaggaataaataatttaggaaatacctgc
ttttttaatgctgtcatgcagaacttggcacagactcacgttctaaatgaactgatgtat
gagataaaggagaaaggaacaaagttaaaaatctgtcatacttcagattctcaactggat
cctttggtggtaaacctgtccagcccaggacctttgacttcagcaatgttcttgttcctt
cacagcatgagggaggctggaaaaggtcctctgtctcctaaagtgctgttcagccagctt
tgtcaaaaggctcctcgatttaaggggttccagcagcaggacagccaggagcttctgcac
tatctgttggatgcaatcaggattgaggagacaaaacgtatacaaactggtatcttaaaa
gcattcaataacccaactactaagacagcagatgaagaaactagaagaaaggtcaaagca
tatggaagagagggtgtgaagatgaacttcatagataggatctttgttggtgaattgact
agcactgtcatgtgtgaggaatgtgaaaatatttcaacagtaaaagaacctttcattgat
ctttcacttcctataatagaggagagggttgcaaaacctgtgcccttgggaagaacaggt
aaaagtaaaagtgtacaggaggcagatcttggtcagtataattgttcttctattggtact
ctgaataatcaacccaaaattgtcaagaaacacactttaacaaaagataagaatcaattg
aaccatgagagacggcttgctagaaaagcttcctcaaaggaagaagaaagaagtcctgtt
atcatgcaggaaaaagccaaaaagcttgagctggaaggtagctctggcattgtgtactcc
aaagacccctgtgcagaggcagctgtcaatggaagccagacagagggcagtgagaaggaa
gccagccgctccgaaagcagcttcgatgcagacagtgaagcctcagaaagcgaaagtgct
tcaaagcaaacaaccttgagcccacccagcagcgtgtctggtgtgcacatcaaccactta
aaccctaaaacgccgcacagcaagccaagcgacagcaacgaagagatgatttccagtgcc
gtatccaagcttagcttctgtgatcctgtaaatgaagataaaaaatcaagttgtggagat
ccagcattaggtttatcaaataattccatgttctcagtaggaaaatcctcactatcccaa
aaccctcaaaatgctttccagacactttcccaaagctacataactagctcaaaggaatgt
tctgttcagtcctgcctttaccagttcacctctgtagagctcttaatggggaacaacaag
cttttatgtgagagctgcacagaaaggaagcagaagtatcagaagaaaaccaactccaca
gaaaagaaaatggaaggtgtctacacaaatgctcggaaacagctgctgatttcttcagtt
cctgcgattcttattctccacctgaaaagatttcaccaggctggtttgagtctacggaaa
gtaaacaggcatgtggatttcccattgattttagacttagcaccattttgtgctgcatct
tgcaagaacgttatggatggtgcaagagtgctgtatagtctttatggaatagtggagcac
agtggctcaatgaggggtggtcattatgcggcgtatgtgaaagtcaggacgtcctccaag
aaactgctagagcatatttctaccactaaaactgttctgggtttaaaagaagccatggga
gcatcaggagggcagtgggtgtatgttagtgatacccatgttcagatggttccagaatca
agagtactaaatgcacaagcatatctacttttttatgaaagattattactataa
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