Lonchura striata domestica (Bengalese finch): 110482115
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Entry
110482115 CDS
T05897
Symbol
CASKIN1
Name
(RefSeq) caskin-1
KO
K21952
CASK-interacting protein
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110482115 (CASKIN1)
Membrane trafficking [BR:
lsr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
110482115 (CASKIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
Caskin-Pro-rich
Caskin1-CID
SAM_2
Ank_3
Caskin-tail
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
110482115
NCBI-ProteinID:
XP_031361959
LinkDB
All DBs
Position
14:complement(12984643..13014192)
Genome browser
AA seq
1542 aa
AA seq
DB search
MGKDQELVQAVKAEDIAAVQKLLQRPKPGKAKLLGSAKKVNVNFQDTDGFSALHHAALNG
NTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGKKEPMKMVLKAGSSVNIPSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIMDNSGKTPLDLACEFGRVGVVQLLLNSNMCAALLEPR
AGDSGDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTDVVRLL
LDSGINAHVRNTYNQTALDIVNQFTTSQASKEIKQMLRDASAALQVRAVKDYCNNYDLTS
LNVKAGDVITVLEQHADGRWKGCIHDNRTGNDRVGYFPSSLVEAISKRTGSWETVTIPQH
FQKIPLPAYGAAVLNGDASSHPFHSLPPPPPPPPHSHQTLFSSFGYHRLSPSSADEPRYG
QGSRGADMSPSHLSPSSQGGSATPAPAEEIWVLRKPFAGGDRSSLGSTGSVASARSSGSG
QSAGSGAHALHAGSEGVKLLATVLSQKASAQESAVGDGPAKAQDIPAGSSRSQSVASSPY
APQPPAEPQLKKMEPPSEGKSSEAVYQWLCKFQLQLYAPNFINAGYDITTISRMTPEDLT
AIGVTKPGHRKKIASEINNLNIPEWLPEYKPANLALWLSMIGLSQYYKVLVENGYENIDF
ITDITWEDLQEIGITKLGHQKKLMLAVKKLAELQRAELGKYEPGTLKRKASGPSPEVLAI
ESPPPEPPECQSPKMTTFQDSELSSELQVAMTGEGPEEPPEKATNPAAPGYRSPPGLGGR
ARLMSSSQELLGDGPRGAPAAAISKSQEYLAEGAGESPPAPPKESRPPRHGHPVKRASVP
PVPGKPRQPFAASAGQLTPPQTPGKARPSSPQGPAAPHATAKVKPTPQLLPPGERPASPR
SLPQSPTHRGFAYVLPQPAEGEAAPPGVPVLPVSVPVLCLPPAGEGEEEPGRPKKRAHSL
NRYAASDSEQERDELLVPDAGPYATVQRRVGRSHSVRAPAGGDKNVNRSQSFAVRPKKKG
PPPPPPKRSSSAISSAGMAEDFPKEGEGEAAVGAPSAEGEGRREQRRASDLGGSVDTGSA
GSVRSIAAMLEMSSIGGGARALALQKPHVAAGPAPAKAPEGYYLQPGPPPGSPDRARVAT
VLATVKHKEAIGLDGEVVNRRRTISGPVTGLVAAARRERADSVRSEAAADGPGERLRVER
GGSPDGIPFAEDGTLTIKQRPRPLGPARGETGEGLSPAHRHGDLAKVEASATLKRRIRAR
QSQQDGVRFVLTESDTVKRRPKAKDKEPALEPPTLAVYQNGTGTVKRRPASELSGAEPPP
TPPPAARPDGPEFVPPPAEPKKPFKPPVSPKPVLTQPPQKMPGPPVPVPKKVPIPSPGSP
EVKRVHGTPPPVSPKPTPPPTAPKPPKPHAAIQSVSASSTPAPSPARQLSPAAKPSSTPP
SLCSSPAKPLSPGAQPQQVPVKPPRSTIASPSVDSGGPELAQQKLEETSASLAAALQAVE
EKIKQEDSQADSAVESKSTVSILDDIGSMFDDLADQLDAMLE
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaccaggagctggtgcaggcggtgaaggcggaggacatcgcggccgtgcag
aagctgctgcagaggcccaagcccggcaaagccaagctcctcggatcagcaaagaaagtc
aacgtcaacttccaagacacggacgggttctcggctctgcaccatgcggcgctcaacggc
aacactgagctcatctcgctgctgctggaggcgcaggctgccgtggacatcaaggacaac
aaaggcatgcggcccctgcactacgcggcctggcagggcaagaaggagcccatgaaaatg
gtgctgaaggcgggctcctctgtgaacatcccgtcggacgagggccagatccccctgcac
ctggcagcgcagcacggccactacgacgtgtcggagatgctcctgcagcaccagtccaac
ccctgcatcatggacaactcgggcaagacgcccctggacctggcatgcgagtttggccgg
gtcggggtggtgcaactgctcctgaacagcaacatgtgcgcggcgctgctggagcccaga
gcgggggacagcggcgaccccaacggcaccagccccctgcacctcgccgccaagaacggc
cacatcgacatcatccggctcctgctgcaggctggcatcgacatcaaccggcagaccaag
gcaggcacggcgctgcacgaggccgctctctgcggcaagaccgacgtggtgcggctgctg
ctggatagcgggatcaacgcccacgtcaggaacacctacaaccagaccgccctggacatc
gtcaaccagttcaccaccagccaggccagcaaggagatcaagcagatgctgcgggatgcc
tcggcagctctgcaggtccgggccgtcaaggactactgcaacaactacgacctgaccagc
ctcaacgtgaaggccggggatgtcatcaccgtgctggagcagcacgcggacgggcgctgg
aagggctgcatccacgacaaccgcaccggcaacgaccgcgtgggctacttcccctccagc
ctcgtggaggccataagcaaacgaacaggttcatgggagactgtaacaatcccccaacac
ttccaaaagatcccgctcccggcttacggggctgctgtgctaaacggtgacgcctcgtcc
catccgttccattccctgcctccacctccacctccaccaccacattcccatcagactctt
ttcagttcctttggctatcacaggctctcccctagcagtgccgacgagccgcgttacgga
caagggtcccgcggggccgacatgagcccgtcccacctgtccccgtcgtcgcagggcgga
tcggccacgccagcccccgccgaggagatctgggtgctgcggaaacccttcgcaggcggt
gaccgcagcagcctgggcagcacgggcagcgtggcctcggcgcgcagctcggggagcggg
cagagcgcgggcagcggggcgcacgccctgcacgccggctccgaaggcgtcaagctgctg
gcaacggtcctttcccagaaggcttctgcgcaagagtctgccgtgggcgatgggccggcc
aaggcgcaggacatccccgcaggttcgtcgcggtcgcagagcgtggccagctccccctac
gccccccagccccccgccgagccccagctgaagaagatggagcctccatcagaggggaag
agctcggaggccgtgtaccagtggctctgcaagttccagctgcagctctacgctcccaac
ttcatcaacgccggctacgacatcaccaccatcagccgcatgacgccggaggacctcacg
gccatcggggtcaccaagccggggcacaggaagaagatcgcctccgagatcaacaacctc
aacatccccgagtggctgcccgagtacaaaccggccaacctggcactgtggctgtccatg
atcggcctgtcccagtactacaaggtgctggtggagaacggctacgagaacatcgacttc
atcaccgacatcacctgggaggacctgcaggagatcggcatcaccaagctgggccaccag
aagaagctgatgctggcggtgaagaagctggcggagctgcagcgcgccgagctgggcaag
tacgagccgggcacgctgaagaggaaggcgtcggggccgagcccagaggtgctggccatc
gagtcccccccgccagagccgcccgagtgccagtcgcccaagatgaccaccttccaggac
agcgagctcagcagcgagctgcaggtggccatgacgggggaaggccccgaggagcccccc
gagaaggcgacgaaccccgcggcccccggttaccgctcgccgccggggctgggcggccgc
gcccggctgatgagcagctcgcaggagctgctgggggacggcccgcggggcgcccccgcc
gccgccatctccaagagccaggagtacctggccgagggggccggggagagccccccggcg
ccgcccaaggagagccgcccgccccggcacggccaccccgtgaagcgcgccagcgtgccg
ccggtgcccggcaagccccggcagcccttcgcggcctccgccgggcagctgacgccgccg
cagacccccggcaaggcacgaccctcgtccccacaaggcccggcggcccctcacgccacc
gccaaggtgaagcccaccccgcagctgctgccgcccggcgagcgcccggcatcgccgcgc
tccctgccccagtcgcccacgcaccgcggcttcgcctacgtcctgccgcagcccgccgag
ggcgaggcggcgccgccgggggtgcccgtcctgcccgtctcggtgcccgtgctgtgcctg
ccgccggcgggcgagggcgaggaggagccgggcaggccgaagaagcgggcgcacagcctg
aaccgctacgccgcctcggacagcgagcaggagcgggacgagctgctggtgccggacgcg
gggccctacgccaccgtccagcgccgcgtgggccgcagccactcggtgcgggcacccgcc
ggcggcgacaagaacgtcaaccgcagccagtccttcgccgtccgccccaagaagaaggga
ccgccgccgccccctcccaagcgctccagctccgccatctccagcgccggcatggccgag
gacttccccaaggagggtgagggcgaggcggccgtcggagccccgagcgccgagggcgag
ggccgccgggagcagcggcgggcgagcgacctgggcggcagcgtggacacgggcagcgcc
ggcagcgtgcgcagcatcgcggccatgctggagatgtcctccatcggcggcggcgcccgg
gcgctggcgctgcagaagccgcacgtggcagccgggccggcgccggccaaggcgcccgag
ggctactacctgcagcccggcccgcccccgggcagccccgaccgcgcccgcgtggccacc
gtcctggccaccgtcaagcacaaggaggccatcgggctggacggggaggtggtgaaccgg
cggcggaccatcagcggccccgtcaccgggctggtggcggccgcccgccgcgagcgcgcc
gacagcgtgcgctcggaggcggccgccgacggccccggcgagcggctgcgggtggaacgc
ggcggctcccccgacggcatccccttcgccgaggacggcaccctcaccatcaagcagcgg
ccgcggcccctggggccggcccgcggggagacgggcgaggggctgtccccggcccaccgt
cacggggacctggccaaggtggaggccagcgccacgctcaagcggcggatccgggccagg
cagagccagcaggacggcgtccgcttcgtcctcaccgagtccgacaccgtcaagcgccgg
cccaaagccaaggacaaggagccggcgctggagccgcccacgctggccgtgtaccagaac
ggcaccggcaccgtgaagcggcggccggcctcggagctgagcggggccgagccgccgccc
acgccgccgcccgccgcccgccccgacggccccgagttcgtcccgccgcccgccgagccc
aagaaacccttcaagccgccggtgtcccccaagcctgtgctgacgcagccgcctcagaag
atgcctgggccgccggtgcccgtccccaaaaaggtgcccatcccaagccccggcagccca
gaggtgaagcgggtccatggcacgccgcccccggtgtcccccaagcccacgccgcccccc
acggcgcccaagccccccaagccccacgccgccatccagtcggtgagcgccagctccacg
ccggccccgtcgccagcccggcagctgagccccgcggccaagccctccagcacgccgccc
tcgctctgctccagccccgccaagcccctgtcgcccggtgctcagccccagcaggtgccg
gtgaagccgccgcgctccaccatcgccagcccgtccgtcgacagcggcggccccgagctg
gcgcagcagaagctggaggagacgagcgcgtccctggccgccgcgctgcaggcggtggag
gagaagatcaagcaggaggacagtcaggcagactcggccgtggagtcgaagagcaccgtg
agcatcctggacgacatcggcagcatgttcgacgacctggcggaccagctggatgccatg
ctggagtga
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