Lactuca sativa (garden lettuce): 111876520
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Entry
111876520 CDS
T05352
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00906
Carotenoid biosynthesis
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Module
lsv_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
111876520
Enzymes [BR:
lsv01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
111876520
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
FAD_oxidored
Pyr_redox_2
HI0933_like
GDI
Thi4
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
111876520
NCBI-ProteinID:
XP_023728825
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Position
9:18939515..18943293
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AA seq
641 aa
AA seq
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MQVSSFSNSKAGTVGFPNSQFFLAFKASQLGNPGFLYEPICTKKAKALNYSVLYEPRGSK
QSVSCSKPLKTGNYSNQEMGFLKSVKRNNNLFSVRAKSVMDVSKVVEKDDVTEGKSKDSG
GGGYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYERDGYTFDVGSSVMF
GFSDKGNLNLITQALAAVGCKMEVIPDPTTVHFHLPNSLSVQVHRGYDDFISELTSKFPH
EKEGIHKFYNECWKIFNALNSLELKSLEEPIYLFGQFFKKPVECLTLAYYLPQNAGSIAR
NFIKDPEVLAFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLTK
GLVDHGSGILYKANVTSIIIDNGKAVGVKLSDGREFFAKTIISNATRWDTFGKLLKKQDL
PKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEEPYGSIFLSIPT
ILDSSLAPKGRHILHIFTTSSIEDWQGLSTKDYEAKKELVADKIISRLEKKLFPGLKSSV
EFKEVGTPKTHRRYLARDSGTYGPMPRGVPKGLLGMPFNTTAINGLYCVGDSCFPGQGVI
AVAFSGVMCAHRVAADVGLEKKSPILDAGLLGILGWLRSLA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcagttttagtaactccaaagccggaactgtcgggtttccaaattcccag
ttttttcttgctttcaaggctagccagttggggaatccaggctttctttacgaacccata
tgcacaaagaaggcaaaagccctaaattacagtgtcctttatgagcccagagggtcaaag
cagagtgtttcttgttctaaacccttgaaaaccggaaattattctaatcaggagatgggc
ttcctcaaatcagtgaaaagaaacaataatttgttctctgttagggcaaaatcggtgatg
gatgttagtaaagtagtggagaaagacgatgtgacagaggggaagagcaaggatagcggt
ggtggtggttatgacgcaattgtgattggttcagggatcggtggattggtggctgcgacg
caattggcggtgaagggagccaaggtgttggttctggagaaatatgtgattcctggtggg
agttctgggttctatgaaagggatggttacacttttgatgttggatcatctgtgatgttc
ggattcagcgataagggaaatctgaacttaataactcaagcactggcggcagtcgggtgt
aaaatggaggtgatacccgatccaaccaccgtccattttcatcttccaaatagcctttct
gttcaagtacatagaggatacgatgatttcatatctgagcttacgagtaaatttccacac
gaaaaggaagggattcacaaattctacaacgaatgctggaagattttcaacgcattgaat
tcactggaactcaaatccctcgaggaacctatctacttatttggacagtttttcaaaaag
cccgtggaatgcttgacactagcttattatttgccacaaaatgctggaagcattgctcgc
aactttattaaagatccggaagttctcgcattcatagatgctgagtgttttattgtgagc
acggttaatgctttacagacacccatgataaatgcaagcatggtgttatgtgaccgacat
tttggaggtattaattaccctgttggtggggttggagggattgcaaaatccttgacaaaa
ggtttagttgatcatggaagtggaatactttataaagcaaatgtcacaagcattatcatc
gacaatgggaaagcagtaggagtgaaactgtctgatggaagagaattttttgcgaaaacc
ataatctcaaatgctactagatgggatacttttggcaagcttttgaaaaagcaagatcta
ccaaaagaagaagaaaatttccaaaaagtttatgtaaaagcgccttcttttctttctatt
cacatgggggtcaaagctgaggttttgccacctgacactgattgccaccattttgttctt
gaggatgattggaaaaacttagaggagccttatgggagtatatttttgagcattccaact
atacttgattcatcattggctccaaaagggcgtcatattcttcacatatttacgacttcg
tccatagaggactggcaggggctttccacaaaagattatgaggcaaagaaggaacttgtt
gcagacaaaatcatcagcagactcgaaaagaaactatttccaggcctcaaatcctccgtc
gaatttaaagaggtggggacaccaaagacacacagacggtatcttgctcgtgatagtggc
acgtatgggccaatgccacgtggcgtgcccaagggcttattgggaatgccttttaatacc
accgctataaatggtctttattgtgtgggagatagttgctttccaggacaaggtgttata
gcggtagccttttcgggagtaatgtgtgcacatcgagtagctgcagatgttggacttgaa
aagaagtcaccaatattagatgctggtctccttgggattcttggttggttgaggtcgtta
gcatga
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