Lactuca sativa (garden lettuce): 111892521
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Entry
111892521 CDS
T05352
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111892521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111892521
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111892521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Transposase_1
Motif
Other DBs
NCBI-GeneID:
111892521
NCBI-ProteinID:
XP_023744336
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All DBs
Position
5:complement(301270979..301277170)
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AA seq
1067 aa
AA seq
DB search
MATPGGPRPGNLPPNYNPNSIADNMQNLQLNRPNQPPNLGNGPRGPPPPFGQQPPPQSQS
QPFPSPFSRPNRPGPPPPGVVPRGVMPPSTGPPPGTLPPFMAANRGPPGANPPPPSSASR
PMPSGPFSSSPLTTGPPSLPPNAGVPPMSNGPPTQGGPQYPPAASMRPRPSTGPPPMPQT
MSSSSSGGQPLHSFLGGPDNQPPRGPPPFSAPPRGMQMQPPSSGPPTFSAPPQNPPFGAQ
PWQMQSRQNTPPPPLMSPPSLSPGSVQPPRMFGMPPSLHNQQSMATISPAMGPSGNVVSG
PSKIDPNQIPRPVPTSSVLLHETRQGNQANPPPPATSEFIVRDTGNCSPRYMRCTINQIP
CTSDLLNTSGMQLALLVQPLALPHPSEEPIQIVDFGEGGPVRCSRCKGYINPFMKFVDQG
KHFICNFCGFTDETPRDYQCNLGPDGRRRDADERPELCRGTVEFVATREFLVRDPMPAVF
FFLIDVSMNALQTGATAGACSAISRVIADLPESPQTMVGIATFDVTIHFYNLKRALQQPL
MLIVPDIEDVYTPLETDVIVQLSECRQHLELLLESIPTMFQNNKTADSAFGAGMKAAFLA
MKSTGGKLLVFQSVLPSAGIAALSAREAEGRTNISAGEKEPHRLLQPVDNTMKTMAIEFA
EYQVSVDVFITTQSYVDIASISVIPKTTGGQLYYYHPFSALSDPAKLYNDLRWNVTRPQG
FEAVMRVRCSQGLQVQEYSGNFCKRIPTDVDLPAVDCDKSLMVTLKHDDKLTDGTECSFQ
CALLYTTVYGQRRIRVSTLSLPCTTMLSNLFRSADLDTQFSCFLKQAANEIPITPLLQVR
DRVTDLSINILHSYRKFCATVSSSGQLILPEALKLLPLYTLALIKSIGLRTDGRIDDRSF
WISYVTSLSVQLAIPLVYPRMISVHDLLSKETDGSGSVIPPPIPLSSEHVSDEGIYLLEN
GEDCLVYVGSSVDPDVTQKLFGISSVGEIPTQFVLQQYENPLSKKLHEVINEIRSQRCNY
LRLKLCKKGDQSGMMFFSYMVEDKSPNGLSYVEFLVHVHRQIQSKMQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccggtggacctagaccaggtaatctcccgccgaattataaccctaattca
atcgccgataatatgcagaaccttcaacttaatcgccctaatcagccacctaacctaggc
aatggacctagaggtccccctccgccgtttggacaacaacccccaccgcaatcgcaatct
cagccttttccatctccattttctagacctaatcgtccaggacctccaccaccgggtgtt
gttcctagaggtgtaatgcctccatctactggacctccacctggtacattgcctcctttc
atggctgccaaccgaggtccacctggagctaatccaccaccaccatcatctgcttcaagg
ccgatgccctctggtcctttttcatcctcccctttgacaaccggaccgccttcactgccg
ccaaacgccggtgttcctcccatgagtaacgggccgccaactcaaggtggccctcaatat
cctcccgccgccagcatgagaccaagaccatcaaccggaccaccacccatgccacaaacc
atgtcatcatcatcttcaggggggcaacccttgcattcatttcttggaggtcctgataat
caaccaccacgagggccaccaccattttcagcacctccaagaggcatgcagatgcaacca
ccctcttcaggacctccaacattttcagctccaccacaaaatcctccatttggagctcaa
ccatggcaaatgcaatcacgacaaaatacaccaccacctcctttaatgtcaccaccttca
ctgtcacctggctctgttcaaccaccaagaatgtttgggatgccaccatctcttcataat
caacaatcaatggctacaatatcacctgcaatgggcccaagtggaaatgtggtttcaggc
ccatcaaagattgacccaaaccaaatcccacgccctgttccaacttcatctgttcttctt
catgaaactcgccagggaaaccaggcaaatccccctccgcctgctacaagtgagtttatt
gtaagggacactggaaattgcagtcctaggtacatgaggtgcaccattaatcagattcct
tgcacttcagatcttttgaacacatctggcatgcaattggctttattggttcagccatta
gctcttccacatccatctgaggagcctatccaaatagtggattttggtgaaggtggacct
gttcgatgctctcgttgcaaaggctacatcaatccgttcatgaaatttgttgatcaggga
aaacatttcatctgtaacttctgtggcttcacggatgaaactccacgtgactatcagtgc
aatcttgggccagatggaagaagaagagatgcagatgaaagacctgagctttgtagagga
acagttgaatttgttgccacaagggaatttctggtacgtgatccaatgccagctgtattc
ttcttcctgattgatgtatcaatgaatgccttgcaaactggtgcaactgcaggagcttgt
agtgctattagccgagttattgctgatcttccagagagtcctcaaacaatggtgggaatt
gctacatttgatgtgactatacatttttacaatctgaaacgtgcattgcaacagccatta
atgctcatagttcctgatatagaagatgtttacactcctcttgaaactgatgttattgtt
cagctttcagagtgtcgtcaacatctggaattgttgctggaaagcatcccaactatgttt
cagaataataaaacagctgattcagcttttggtgctgggatgaaggctgcttttctggca
atgaagagtacaggaggcaaacttttggtatttcaatcagtcttgccttctgctggtatt
gctgctctttctgctagagaggctgaaggaagaactaatatctctgcaggagagaaggaa
cctcatagattacttcaaccagtagacaatactatgaagacaatggctattgaatttgca
gaataccaggtctctgttgatgtattcattactactcaaagttatgttgacattgcttca
atctctgttatcccaaagacaactggaggccagttatattattaccacccattttccgcc
ctttctgatcctgcaaaactctacaatgatcttcgatggaatgtcacaaggccacaaggt
tttgaagctgtgatgcgtgttagatgcagtcagggtcttcaagtacaagaatactcagga
aacttctgtaaacgcattcctacagatgttgacttacctgcggttgattgtgataaatct
ctaatggtaaccttgaaacatgatgataaattaactgatggcacagaatgttctttccag
tgtgcacttctttatactactgtatatggacaaagaagaatacgagtgtccaccttatcc
ttaccatgcaccaccatgcttagcaatcttttccgttcagctgatttagacactcaattt
tcttgttttctaaagcaagctgcaaatgaaatccctattacgcccttattacaagtgagg
gatcgagtcacagatcttagtatcaacattcttcattcttataggaaattttgtgcaact
gtttcatcatctggacaacttattcttcctgaagctctcaagttgttgcctttatacact
cttgctttgattaaaagtattggattgagaacggatgggagaatagatgatagatcattt
tggatcagctatgtgacttctctttctgttcaattagcaatcccacttgtgtatcctaga
atgataagtgttcatgaccttctttcaaaggaaacagatggatctggatcagttattcct
ccacctatacctttatctagtgaacatgtgagtgatgaaggaatctatcttcttgaaaat
ggtgaagattgtttagtttatgttggaagctctgttgatcctgatgtaacacaaaaactg
tttggtatatcgtctgttggtgaaatccctactcagtttgtgttgcagcagtatgagaac
cctttgtcaaagaagctacatgaggtcataaatgagatacgaagccaaagatgtaactac
ttaaggttaaaattatgcaagaaaggtgaccaatcaggaatgatgttcttttcttatatg
gtggaagacaagtctccaaatggtttgtcatatgttgagtttttggtgcatgttcatcgg
caaattcaaagtaagatgcaataa
DBGET
integrated database retrieval system
