Lactuca sativa (garden lettuce): 111921254
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Entry
111921254 CDS
T05352
Name
(RefSeq) cryptochrome-1
KO
K12118
cryptochrome 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111921254
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
111921254
NCBI-ProteinID:
XP_023772596
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Position
9:51413572..51419141
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AA seq
673 aa
AA seq
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MTGGCSIVWFRRDLRVEDNPALAAGVRSGKVIPVFIWAPEEEGHYYPGRVSRWWLKQSLS
LLDSSLKNLGTSLITKRSSDSVSSLLDVIKSTGATQLFFNHLYDPLSLVRDHRAKEILSE
NGIIVRSFNADLLYEPWEVLDDEGRPFTTFAAFWERCLSMPYDPEPPQLPPKRIISGDVS
KCPSDTLVFENESEKGSNALLSRAWTPGWSNGNKALTAFINGPLLHYSINRRKADSATTS
FLSPHLHFGEVSVRKVFHQARIKQILWANEGNKSGEESVNLFLKSIGLREYSRYMSFNHP
YSHERPLLGHLKFFPWVIDEGYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF
FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDSHELERIDNPQIEGYKFDP
NGEYVRRWLPELSRLPTEWIHHPWNAPEFVLQAAGIELGSNYPLPIVKIDTAQTRLQQAL
TQMWQHEANSRAVLENGIEEGLGDSTDDTPIAFPQDMQMETEQDNLGNRVTTTIRHYEDQ
MVPSLTVTTSLFRGTEQEEEEEEESSTDHRNGGHDDRRAEVPDDDDMNLESGREGIQSVI
PQFNNQIDLRNINGGGGGSHSPAESSSGTSFRRERDGVMVPVWSPGNSDTSSYLQRHPQS
HQVINWRQLSQTG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtgggtgtagtatcgtatggtttaggagagatctgagggtagaagataaccct
gctttagctgctggtgtaagatcaggtaaagtgataccagtgttcatatgggcacccgaa
gaagaaggtcattattacccaggaagggtatcaagatggtggcttaaacagagtttatct
ttgcttgattcatctttgaagaatcttggaacttctcttatcacaaaacgatcttccgat
agtgtttcttctcttcttgatgtcattaaatccactggtgctacacagctcttttttaac
cacttatatgatccattatctctggttagggatcatagagcgaaggagattttgagtgaa
aatgggattatagtgcgttcatttaatgcggatttgttatatgaaccatgggaagttctt
gatgatgaaggtcgaccttttactacatttgcagcgttttgggaaaggtgtcttagcatg
ccttatgatcctgagcctcctcagcttccacctaaaagaataatctcaggtgacgtgtct
aaatgcccttcagacacgttagttttcgaaaacgaatcagagaaaggaagcaatgcactt
ctatctcgagcatggacgccggggtggagcaatggaaacaaagccctaacagctttcatc
aacgggccattactacattactccattaaccggaggaaagccgatagcgccaccacttcc
ttcctttccccccacctccatttcggtgaagttagcgtcagaaaagtcttccaccaagct
cgaatcaaacaaatcctctgggcaaacgaaggtaacaaatccggtgaagaaagcgttaat
ctgttcctcaaatcaatcggtcttcgtgaatactcaaggtacatgagctttaaccatccc
tacagtcacgaaagaccgcttttagggcatttgaagtttttcccttgggtgattgatgaa
gggtattttaaggtatggagacaaggtagaacagggtaccctttggttgatgcggggatg
cgagaactttgggctactggttggcttcatgatcgaattagggttgtggtttcgagtttt
tttgtcaaggttttacagcttccatggagatgggggatgaaatatttctgggatactttg
ttagatgcagatcttgaaagtgatgctctcggctggcaatatatctccggtagtctacct
gatagtcatgagcttgaacgcatcgacaatccccagatcgaggggtataaatttgaccca
aatggtgaatacgtaagaagatggctgccggagctttctagactaccgactgaatggatc
caccacccatggaacgcaccggaattcgtgcttcaagctgccggaattgagctcggatcc
aattaccctcttccgattgtgaaaatcgatacagcacaaactcgattacaacaagcactt
acacaaatgtggcaacacgaagccaattccagagctgttcttgaaaacggaatcgaagaa
ggactaggtgattccaccgatgatactccgattgctttcccacaagacatgcaaatggaa
acggaacaggataacctcgggaaccgtgtaacaaccacaatccgccattacgaagatcaa
atggtacctagtttgactgtgactacatctttgtttagaggaacagaacaagaagaagaa
gaggaggaagaatcgtccacagatcatagaaacggcggacacgatgataggagagctgaa
gttcccgatgatgatgatatgaatctggaatcgggaagagaaggaattcaatcggtgatt
ccacagtttaataaccagatagatctaaggaacattaatggaggtggtggtggttcacat
tcaccggcggaatcttcaagtgggacaagttttaggcgggaaagagatggagttatggtg
cctgtgtggtcgcctggaaattcagatacttcttcttatttgcagaggcatccacagtcg
catcaagtaatcaactggagacaactttctcaaaccgggtaa
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