Ligilactobacillus saerimneri: GTO87_03280
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Entry
GTO87_03280 CDS
T08336
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lsw
Ligilactobacillus saerimneri
Pathway
lsw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GTO87_03280 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsw03400
]
GTO87_03280 (mutM)
Enzymes [BR:
lsw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GTO87_03280 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GTO87_03280 (mutM)
DNA repair and recombination proteins [BR:
lsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GTO87_03280 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_Tnp_IS1595
Auto_anti-p27
DZR
OrfB_Zn_ribbon
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QLL77703
UniProt:
A0A7H9EJ21
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All DBs
Position
650576..651403
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AA seq
275 aa
AA seq
DB search
MPELPEVETVRRGLIKLVQGRTVKKVTVLYPKMIESDLTEFVTQLTGKKILTVDRRGKYL
LLRFSGDLTVVSHLRMEGKYFVQPQTQPLEKHTHVVFDLDDGQQLRYNDSRKFGRMRLVQ
TGQENDLKSLQKLGPEPFAPEFTVDYFAQALHRRKKAIKTALLDQTIVTGLGNIYVDEVL
WMTKIHPETPANHVTRSEITALRQNIIAELQRAITAGGTTIRSYTDAFRNMGEFQFALNV
YGNDGHPCPRCGTIIEKIKVGQRGTHFCPQCQKVE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaggtagagacggtacgacgtggattgatcaaattagtgcagggc
agaacagtaaaaaaggtaacggtcttatatcccaaaatgatcgagagtgacctgacggag
tttgtgacgcaactaacgggtaaaaagatcctgaccgttgaccggcggggaaaatactta
ttattacggttttcgggcgatttgacggttgtatcgcatttacggatggaaggaaagtat
tttgttcaaccccagacacaaccgttggaaaagcatacccatgtagtgtttgacctcgat
gacgggcaacagttgcgctacaacgattcacgtaaatttggcagaatgcgcttagtgcag
acaggacaagaaaatgacctcaagtcactccaaaaattgggaccagagccattcgcacca
gaatttaccgtggattactttgcgcaagcactacaccggcgcaaaaaagctataaaaacc
gcgctgcttgaccaaacgattgtgaccggattaggaaacatttatgttgatgaggtttta
tggatgaccaagattcatccggaaactcccgctaaccatgtgacacggtcagagattact
gccctgaggcaaaatatcattgcagagttacaacgggcgattaccgccggagggacaacc
attcgttcatataccgatgctttccgcaatatgggggaatttcaatttgcattaaatgtt
tatggcaatgacggtcatccctgtccacggtgtggtactataattgaaaaaattaaagtt
gggcaacgggggacacatttttgtccgcaatgtcaaaaggtagaatga
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