Lachancea thermotolerans: KLTH0C09394g
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Entry
KLTH0C09394g CDS
T01117
Name
(RefSeq) pumilio-family RNA binding domain-containing protein
KO
K14844
pumilio homology domain family member 6
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0C09394g
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0C09394g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
KLTH0C09394g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
KLTH0C09394g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
DUF4253
Motif
Other DBs
NCBI-GeneID:
8291507
NCBI-ProteinID:
XP_002552629
UniProt:
C5DEI0
LinkDB
All DBs
Position
C:780557..782530
Genome browser
AA seq
657 aa
AA seq
DB search
MAPVISKKSGKKHSLNAKDQKTAKKAKLSSKVPEDEGVSGSSSEEEDDLDEVLSSGESDK
DELDESSSEGEQEDGSEGSEDESEGSSEAKGEDDSKGGVSQHAEQRKLLKERKLQRKSGT
QVQQIKSLWERLRVKNPPMPKEVREKLSNEIWELSKDCISDLVMKHDASRVVQTLVKYSS
KARRDQIVAALKGQYYVLATSSYGKYLLVKLLHYGSKQSRQLIIDELHGSLRKLMRHREG
AYVVEDLYVLYASHEQKQQMLREFWGSEYAVFRDAHKNQTLEQVCESSAEKKTIIARNLI
GTISASVEKGSTGFQILHAAMRDYVKIAGEKETSEFIELLDEKYAELVHTPEGADVACTL
LAKATAKERKMIIKNLKDHADKLIRNEHGNLVFITALMCVDDTVLMFKSFGPSVKEMLQS
FVVDKYGRRPFLYILLGLDGKYFSPIVKKDLNRYIEYSKATSKKPFEQRRKELLNKFAPM
YLSTISKYYDMILSDNLGSQFVSEVLVNDEFYDQLSDKEKEKHREIVNTVSTYFKGDVSE
ESHPIHKPFSVRLLKSLIQGGKWNAKEKKVEPLHSVLGLGTEFAQQFYEDIIDETNLLDW
INNADSSFTIVAIYESLSKTENKKFFKDLKKVSKKINKDDESNKGARLLLKLMNNKA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgttatctcaaagaaatcagggaaaaagcattcgctgaatgcaaaggaccag
aaaacagccaagaaggccaagttgtcttcgaaggtccccgaagacgagggtgttagcggg
tcctcatctgaagaggaggacgaccttgacgaagtgctttcgagcggcgaatccgacaaa
gatgaactagacgagtcttcaagcgaaggggagcaagaagatggctcagaaggctcagag
gatgagtcggagggctcttcagaagctaaaggcgaagatgattctaagggcggtgttagc
cagcacgcagaacaaagaaaactgctcaaagagcgtaagctgcagaggaagtcaggaact
caggtccagcaaataaagtcactctgggaaaggttgcgtgtaaagaatcctccaatgccc
aaggaagttcgcgaaaagttgtcgaatgaaatatgggagctctctaaggattgtatcagc
gaccttgtgatgaagcatgatgcctcgcgtgtagtgcagactctcgtcaagtattcttct
aaagcgcgccgtgaccagattgttgctgcgctaaagggccaatactacgtccttgccacc
tcgtcttatggtaagtacttgttggttaagctactgcactacggctctaagcagtccaga
cagctaatcattgatgagctgcacggctccttaagaaagcttatgagacatcgtgaaggt
gcttacgtggtggaagacctttacgtgttatacgcctcgcacgaacaaaagcagcagatg
ctaagagagttctgggggtccgagtatgcagttttcagggacgctcacaagaaccaaact
ctagaacaagtctgcgaaagcagcgccgaaaaaaagactatcatagcgagaaacttaatt
ggtactatctccgcgtctgtcgagaagggctccactgggttccagattttgcatgccgcc
atgagagactatgtcaagattgcaggggaaaaagagacctctgagttcatcgagctcctg
gacgaaaagtacgctgagttggtccatactcccgaaggtgccgatgtcgcttgtacgcta
ttagctaaagccaccgcgaaggagagaaagatgatcatcaagaatttgaaggaccacgcc
gacaaattgatcagaaatgagcacggcaacttggtgttcatcaccgctctcatgtgtgtt
gatgacacagttttgatgtttaagtcctttggcccaagtgtaaaggagatgctccaaagc
ttcgtcgtggacaaatatggaagaagaccattcctttacattttgttgggtctagatggc
aagtacttctctcctattgttaaaaaagatttgaaccggtacatcgaatactctaaagcg
acttctaagaagcctttcgagcaaagaaggaaagaactcttgaacaagtttgctccaatg
tacttgagcacgatttctaaatactacgacatgatcctctctgacaacttaggatctcag
tttgtcagtgaagttctagtcaacgatgagttctacgaccagctgagtgacaaggaaaag
gaaaagcaccgcgaaattgttaacactgtttctacttacttcaaaggcgatgtttctgaa
gagtcccatccaattcataagccgttttctgtaaggctgctgaagtcgttaatccaaggt
ggtaaatggaacgcaaaggagaagaaagttgagccattgcacagtgtcctaggcttagga
actgagtttgctcagcaattctacgaggacataattgatgaaaccaacctgctggactgg
atcaataatgcggacagttctttcaccattgtggcaatctacgaatcattatcaaaaact
gaaaacaaaaagttcttcaaagacctgaagaaggtttctaagaagattaacaaggatgac
gagtctaacaagggcgctcggctgcttttgaaactcatgaacaacaaagcctaa
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