Lachancea thermotolerans: KLTH0C11286g
Help
Entry
KLTH0C11286g CDS
T01117
Name
(RefSeq) KLTH0C11286p
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KLTH0C11286g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0C11286g
Enzymes [BR:
lth01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KLTH0C11286g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
KLTH0C11286g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
8291592
NCBI-ProteinID:
XP_002552706
UniProt:
C5DEQ7
LinkDB
All DBs
Position
C:926742..929597
Genome browser
AA seq
951 aa
AA seq
DB search
MDGNGKCPSETDTSKISENEPHNFAPSPDFRWLCEELFHRLDAINEHRQELGKAVTVKRV
EIITCFIKLWRTTVGDDFFPALRLMFPYRDPRAYHIKDFTLIKAVCKALNLSRDSLTERR
LLNWKQYAGRGTSLSKFCVQEISKRRKEPLPERQLTIDGLNEKLDELAKEASGKKAWGTT
GLSESHSFQFCLKNLSFLELRYFFDIVLKNRVIGGLEHKFLACWHPDAQIYLGVVTDLKI
LSKKLWNPSVRLDKRDLSINIGHAFAPHLAKRLHVSYERICSKLKHDFILEEKMDGERIQ
LHYVNGGSVLKFLSRRGIDFSHLYGQEVARGVISQYLKLKSDVRDCVLDGEMVSYDKKRK
IILPFGIVKSAAVDELINSEVGNENDGYRPLYMVFDLVYLNGVSLTKVPLHIRKEYLKEI
LSPVPDVVEILKGIRACDAKAIKNFMQRAIEMGSEGVIVKQASSTYEVGARNDHWVKIKP
EYFEDLGETMDLVVIGRDPGKKDSLMCGLLVSDSEHILENFGPIEHGKEGDPIIKCVSFC
NVANGVSDEEFKEINRKTRGSWVSYKEKPPPLSLLEFGSKIPVEWIDPKNSVVIEVKARS
VENSEYSSKRYRAGSTLHSAYCRRIRNDKDWTTCTSVAQYQQAKAAHNYHRYKRKVHQVS
PRRKRNVHEIFEYCAGEAKSELDTEGSSIFEGLHFYILSDYVTSQRRRYERGMVAAKVVK
HGGLIVKNIDMRPEHLSYLRIVSGKTTIECRNLVNRGYDIIDPCWIFDCISAGFQLGIEP
KHCFQTSRRLLDNSRQRVDQYGDSFSRPLDTTEFQQLFKFFCSSPSDFSSRISSMLQDDL
DEAPLFLLQRFKIYVLAADLIPQQFSILRRKIELYGGVVSETLEGANLVLVPSALSTART
AYYVQELRQKIAGNAFAGNTNTRIPHIVRSEWLDTCTTEQCLVPEEDFSSI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaatggtaaatgcccttcagaaacagacacatcaaagatctcagaaaatgag
ccacacaattttgcgccgtccccagattttagatggctttgtgaagaacttttccatagg
ttagatgcgatcaatgaacaccggcaggaacttggcaaggccgtcactgtgaaaagagtt
gagatcatcacatgttttattaagctatggaggactacagtaggagacgatttctttcct
gcgcttcggcttatgtttccttacagagacccaagagcataccacatcaaagactttaca
ttaataaaagctgtatgcaaggcactcaacctgtctagggattcactcacagaaaggcgc
ttgttgaactggaagcaatatgctggtcggggaactagcttatcgaaattttgtgtacag
gagatctcaaaaaggagaaaagaaccactgccagaacggcaactgacgattgatgggcta
aatgagaaacttgacgaactcgcgaaagaagcttccgggaaaaaggcgtggggcactacc
ggtctatcggagtctcattctttccaattttgcttaaaaaacttgtccttcttggagttg
cgatactttttcgatattgttctcaagaatagagtaataggggggctagaacacaaattt
ttagcttgctggcatcctgatgcgcaaatctaccttggtgttgttactgatctcaaaatt
ctctccaaaaagctctggaatccgtctgttaggttggataaaagggatctatcaatcaac
attggtcatgcgttcgctccacatctcgccaagaggcttcacgtttcatatgagcgtatc
tgttcaaagctcaagcatgactttatattagaggaaaagatggacggcgaaagaatccag
ttgcactatgtcaatggcggctcggtgctgaagttcttgagtaggcgaggcatagacttc
tcgcatttgtacggccaagaagttgcacgaggagtcatttcacaatatttgaaattaaag
agcgatgtccgcgattgcgtcttggacggagagatggttagctatgataaaaaaaggaag
attatcctccctttcggtattgtcaaatcagccgccgttgatgaattgataaattctgaa
gttgggaatgaaaatgacggctacaggccactttatatggtctttgacctcgtctatctt
aacggggtatcgctaacgaaagtaccactgcatataaggaaagaatatctcaaggaaatc
ctgagtcctgttccagatgttgttgaaattctgaagggcataagggcatgtgacgctaaa
gccattaagaacttcatgcaaagggcaatcgaaatgggctcggagggcgttattgtcaag
caggcatcttcaacttatgaagttggggctcgtaacgatcattgggtcaaaatcaagcca
gaatattttgaagacttgggcgagacaatggacttagtagtgatcggacgggacccaggt
aagaaagattctctcatgtgcggtctactagtttcagacagtgagcacatacttgagaac
tttggtccaatagagcatggcaaggaaggggatcccatcattaagtgtgtttcattctgc
aacgttgcgaatggagtatcagatgaagagttcaaggaaatcaatagaaaaactcgaggc
tcatgggttagctacaaggaaaaacctccacctttaagcttacttgaatttgggtcaaaa
ataccagttgaatggattgatcctaaaaactcagttgtcatagaagtcaaagcaagatca
gttgaaaatagtgaatattctagcaaaaggtatcgagcggggagtactttacatagcgcg
tattgtcgaagaataaggaatgataaggactggacaacatgcacaagtgtcgcacagtac
cagcaagccaaagcggctcataactaccaccgatacaaaagaaaggttcaccaagtttct
ccgcgtcggaagaggaacgtacatgagatcttcgagtactgtgctggcgaagctaagtcc
gaattggatacggaaggctcaagcatttttgaaggacttcatttttacatattgagcgat
tacgtcacttcgcagagaaggaggtatgagagaggaatggttgctgccaaagtcgttaaa
catgggggacttattgttaagaacattgacatgcgaccagagcacttaagttatttgcgc
attgttagcgggaaaaccacaatcgagtgccgcaatcttgttaacaggggatatgacatc
attgacccttgctggatatttgactgcatttctgccgggttccaacttggaattgaacca
aagcattgcttccagacgtcacgcagactgcttgacaatagccgccagagagttgatcaa
tacggcgacagtttttctcgtcctttagataccacggagttccagcagctcttcaaattt
ttttgctcctcaccttctgatttttcttcccgcattagttcaatgcttcaagacgatctt
gatgaggcgccactcttccttctacagagattcaaaatttacgtcttggcagcagacctg
attccccaacaattctcaatcctgagaagaaagatagaactctacggcggggtggtctct
gagacccttgaaggtgcgaatttagtgctagtcccctcagctttgtcaacagcgcgcact
gcctactatgttcaagaattgagacagaaaatcgcaggaaacgcctttgcagggaatacc
aataccagaatcccacacatagtaagatctgagtggctcgacacgtgcaccactgaacaa
tgtctagttcctgaggaagatttttcgtcaatataa
DBGET
integrated database retrieval system
