Lachancea thermotolerans: KLTH0G10340g
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Entry
KLTH0G10340g CDS
T01117
Name
(RefSeq) KLTH0G10340p
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lth01009
]
KLTH0G10340g
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0G10340g
04131 Membrane trafficking [BR:
lth04131
]
KLTH0G10340g
03036 Chromosome and associated proteins [BR:
lth03036
]
KLTH0G10340g
Enzymes [BR:
lth01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
KLTH0G10340g
Protein phosphatases and associated proteins [BR:
lth01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
KLTH0G10340g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
KLTH0G10340g
Membrane trafficking [BR:
lth04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KLTH0G10340g
Chromosome and associated proteins [BR:
lth03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
KLTH0G10340g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
8293761
NCBI-ProteinID:
XP_002555483
UniProt:
C5DMN5
LinkDB
All DBs
Position
G:complement(874566..876692)
Genome browser
AA seq
708 aa
AA seq
DB search
MTESAEVKQEEPSEQINGLKRDHESATLNDGTGNQASVAKRPTIVPACRPKLHYTPLKTG
LCYDVRMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLIDDPTLSGVDSIGDLML
KIPVREATDEEILQVHTKEHLEFISKTTSMTRDQLLKETEKGDSVYFNNDSYLSAKLSCG
GAIEACKAVVEGRVKNALAVVRPPGHHAEPEVAGGFCLFSNVAVAAQNILKNYPESVRKI
MVLDWDVHHGNGTQKAFYDDDRVLYISLHRHELGKYYPGTIHGNSDRVGEGKGEGFNCNI
PWPWKGVGDSEYLWAFEQVIMPMGREFRPDLVIISSGFDAADGDTVGQCHVTPSCYGHMT
HMLKSLARGNLCAVLEGGYSLDSIAKSALAVAKVLIGEPPDELPVVKQPKLEAVEVIDSV
IKTQSKYWKCFKSTHGNDGCSFKEQATDTAINKNFPLQNAIRQQQMRLLANEFRFVTLPL
FKKELPDDTAICSPNIYDASAIIVCVHDTPSIWAQRSRATGTIDPSTSIIVDTTLDVIKW
ASSRNYGVIDINIPQSLHEQDNYSAVITAQEVLVHIWDNYLKYFPSLNRVAFVAIGDAHS
GVVHLLGHRDTRSVVKSAVSFVDQRPLRPLIPLVDETLADWYFKNSLVFASAEHTCWGND
GNENKKPRKKFGRVLKCDSDGINNILEERFEEATDFILDTFEEWSDSE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgactgagagcgctgaagtcaaacaggaagagccatcagagcaaataaatggtttgaaa
agagatcacgaaagcgccacattgaacgacgggacgggaaaccaagcctcggttgccaaa
agaccaacgatagtgccagcttgccgaccaaaattacactacacccctctcaaaactgga
ctgtgttatgatgtcaggatgcgctaccatgcaaaaatctttacatcctacttcgaatac
attgatcctcatccagaggaccctaggcgaatttacagaatttacaagatattagcagaa
aacggcctaatagacgatccaaccctcagtggagttgacagtattggcgatcttatgctc
aaaattcccgttagagaggctaccgacgaggaaattttgcaagtccataccaaagagcac
ttggaatttatctccaagaccaccagcatgacaagagatcagcttctgaaggaaaccgaa
aaaggtgattctgtttacttcaacaacgactcatatcttagtgcgaaactctcatgcggt
ggcgccattgaagcttgtaaagcggtcgttgaggggcgtgtcaaaaatgcattagcagtc
gtgcggcctcctggacatcatgctgaacctgaagtggcaggtggattctgcctttttagt
aatgttgcagttgctgcgcagaacattttaaaaaactaccccgaaagcgtacgcaaaatt
atggttcttgactgggatgtccatcatggcaacggaactcaaaaagccttttacgatgac
gaccgcgtgctctacatttcacttcatagacacgagttgggaaagtactacccagggact
attcacgggaactctgacagagttggagaagggaaaggcgagggatttaattgcaacata
ccctggccctggaaaggagttggcgattccgagtatctgtgggcgtttgagcaggtgata
atgccaatggggcgtgaatttcgacccgatctagtgataatatcttcagggtttgatgct
gcggatggcgataccgttggccagtgtcacgtaactcccagctgttatgggcatatgacg
catatgctgaaatctttggccagaggcaatctttgcgccgttcttgagggtggttatagc
ttggattctattgctaaaagtgccttagcagtagccaaggttttgataggagagccacca
gacgagttgcctgtagttaaacaacccaagctcgaagccgtcgaagtgattgattccgtt
attaaaacccaatctaagtactggaagtgctttaagagtacacatggcaacgatggttgc
tcttttaaggaacaggctaccgatactgcaatcaacaaaaactttcctctacaaaacgca
atacggcagcaacaaatgcggttgttggcaaacgagttcagatttgttactttgccgctt
ttcaagaaagagctaccagacgacacagcaatctgctctccaaacatttatgatgcttcc
gcgattatagtgtgtgttcatgatactcccagcatatgggctcaaagaagtcgagccaca
ggcacaattgatccctcaacatccatcatagtcgatactacccttgatgtgataaaatgg
gcttcgagtagaaattacggagtcattgacatcaatatacctcagtcgcttcatgaacaa
gacaactactctgctgtgataacagcgcaagaggtccttgtacacatttgggataactac
ctaaaatacttcccaagccttaacagggttgcctttgttgcaataggagatgcacacagc
ggggtggttcaccttcttggtcacagggacacgaggagtgttgtcaagtcggctgtttcg
tttgttgatcaaaggccactaagaccgttgattcctcttgttgatgaaacgttagctgac
tggtattttaaaaattcactggtttttgcaagtgctgaacacacttgttggggcaacgac
ggtaatgagaacaagaaaccaagaaaaaaatttggaagagtacttaagtgcgactccgat
gggataaataacatacttgaagagaggtttgaggaggcaacagattttattcttgacact
ttcgaagaatggagcgacagcgaatga
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