Lutibacter profundi: Lupro_01925
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Entry
Lupro_01925 CDS
T04235
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
lut
Lutibacter profundi
Brite
KEGG Orthology (KO) [BR:
lut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lut03021
]
Lupro_01925
Transcription machinery [BR:
lut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Lupro_01925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
Myb_DNA-bind_6
DUF722
DUF4279
DUF134
Motif
Other DBs
NCBI-ProteinID:
AMC10082
UniProt:
A0A0X8G4U1
LinkDB
All DBs
Position
430524..431033
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AA seq
169 aa
AA seq
DB search
MKQSEFLKTVMPFKDKVFRVAKRLLVSTEEAEDATQELFFKLWKNKSKLKDYKSIEAFAM
TMTKNYCFDRLKSKQANNLKLIHSNYKENGTSLNRQIELNDSVSKVHELIQNLPEQQKLI
IQLRDIEQYEFEEIAEMLNLKPTAIRVSLSRARKTIREQLIKQHNYGIS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtctgagtttttaaaaacggtaatgccttttaaagataaagtttttcgagtg
gcgaaaagacttttggtatctacagaagaagcagaagacgctactcaggaactttttttt
aagttatggaaaaacaaatcgaaattaaaagactataaaagtattgaggcatttgctatg
acaatgactaaaaattattgttttgatcgtttaaaatcaaagcaagctaataatttaaaa
ttaatacatagtaactataaagagaatggaacgtctttaaatagacaaatagaactaaat
gatagtgtaagtaaggttcatgaattaatacagaatttgcctgagcaacaaaaattaata
atacaactcagagatattgaacaatatgaatttgaagaaattgcggaaatgttaaattta
aagccaacagcaattagagtttcattatctagagcacgaaaaacaataagagaacaatta
ataaaacaacataattatggaattagctaa
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