Lutibacter profundi: Lupro_04495
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Entry
Lupro_04495 CDS
T04235
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lut
Lutibacter profundi
Pathway
lut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Lupro_04495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lut03400
]
Lupro_04495
DNA repair and recombination proteins [BR:
lut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lupro_04495
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Lupro_04495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_33
DnaJ_CXXCXGXG
nSTAND3
AAA_22
ATPase
Viral_helicase1
AAA_25
ATPase_2
AAA_23
AAA_18
cobW
AAA_21
Thioredoxin_6
T2SSE
R-HINP1I
Motif
Other DBs
NCBI-ProteinID:
AMC10544
UniProt:
A0A0X8G5R1
LinkDB
All DBs
Position
1018662..1021487
Genome browser
AA seq
941 aa
AA seq
DB search
MAKPNEYIEIQGARVHNLKNIDVRIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGSLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLFYARAA
DAYSYNTNKKMVSYSNEQIKELILNTYQEKKIVILAPVVKSRKGHYRELFEQIAKQGFVR
VRTDGEIKEIEKGMRLDRYKTHDIEIVIDRLSVNKSSEKRLEETITTALYSGNNVLMVLE
HNTNIPRYFSSDLMCPETGISYPNPEPNNFSFNSPKGACKVCNGLGKVNKINIQKVIPNK
SISIKSGGIIPLGEQKNSWIFKQLQLIAERYKFQLSDAISKIPTEALTIILHGGNEKFKI
ASKTMGITRSYEIDFEGIISFIENQYKLSESTSIKRWAKDFMDEVPCESCQGKRLKKEAL
FFKINDKNISELAQLDISELAFWFHTIEEKLTEKQLKIASEIIKEIRTRIQFLLNVGLDY
LTLDRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNKKLINSLLNLRDV
GNSVIVVEHDKEMIEHADFVLDIGPGAGHHGGEIVSEGTFEELKQHNTLTANYLNGTKKI
EIPKKRRKGNGHTITLSGATGNNLKNISVDFPLGKLICVTGVSGSGKSTLINETLYPILN
KYIYRGVKKPMPYKSIKGLEHIDKVIAIDQSPIGRTPRSNPATYTGVFSEIRNLYAKTSE
AAIRGYKPGRFSFNVKGGRCETCQGGGVRVIEMSFLPDVHVECETCQGKRFNRETLEIRY
KGKSISDVLNMTIDDAVSFFENIPKIHRKLKTIHSVGLGYITLGQQSTTLSGGEAQRIKL
ASELSKRDTGNTFYILDEPTTGLHFEDIRVLMIVLNKLVNKGNTVLIIEHNLDVIKLADY
VIDIGMEGGKNGGQLICFGTPEKVSKHKKSYTAQFLKKELN
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacccaatgaatatattgaaattcagggagcacgagttcacaatttaaaaaat
attgatgttcgtattcctagagagaagcttgttgttattacaggcttaagcggtagcgga
aaatcttcattagcatttgacacaatatacgctgaaggacaacgtaggtacattgaaact
ttttctgcttatgctcgtcagtttttaggaagtttagaaagacccgatgttgataaaatt
gatgggctttctcccgttatttcaattgaacaaaaaaccacaaataaaagtccgcgctct
acagtaggtactattactgaaatttacgatttcttaagattgttttacgcccgtgcagct
gatgcttattcttacaataccaataaaaaaatggtaagctacagtaatgagcaaataaaa
gaacttattttaaatacttatcaagaaaaaaagatagtaattcttgctccagtagtaaaa
tctaggaaaggacactatcgagaactttttgagcaaatagcaaagcaggggtttgtacga
gtacgtaccgatggtgaaataaaagaaattgaaaaaggaatgcgcttagatcgctataaa
acacatgatattgaaattgtaattgatcgtttgtccgtaaataagtcttcagaaaaaaga
cttgaagaaaccattacaactgctttatactcaggtaataatgtattaatggttttagag
cacaatacaaacatccctcgttactttagtagtgatttaatgtgccctgaaactggtata
tcatatccaaatcctgaaccaaataatttctcattcaattctcctaaaggagcttgtaaa
gtatgtaacggacttgggaaggtaaataaaattaatattcaaaaggttattcctaataag
tctatttccattaaaagtggaggaattataccgcttggagaacaaaaaaacagttggatt
tttaaacaactacaattaattgcagaacgttacaaatttcaattaagtgatgccatttct
aaaataccaactgaagctttaaccataattttacacggagggaatgaaaaatttaagatt
gcttcaaaaacaatgggtattacaagaagttatgaaattgattttgaaggaattattagt
tttatagaaaatcaatataaattaagtgaatctacttccataaaacgctgggctaaagac
tttatggatgaagtgccttgtgaatcttgccaaggtaaaagacttaaaaaagaagctttg
ttctttaaaattaatgataaaaatatttcagaattagcacaacttgatatttctgaactt
gctttttggtttcatacaattgaagaaaaattgaccgaaaaacaacttaaaatagcctct
gaaataataaaagaaattcgcaccagaattcaatttttattaaatgtaggtttagattat
ttaacattagacagaagttcaaaatcactttctggtggtgaagctcaacgcataaggctt
gcaactcaaattggttctcaattagttggagttctttacattttagacgaaccaagtata
ggacttcatcaacgagacaataaaaagttaattaattcactattaaatttaagagatgtt
ggtaattctgtaattgttgtagaacatgacaaagaaatgatagaacatgcagattttgta
cttgatataggccctggagcaggacaccatggtggagaaatagttagcgaaggcactttt
gaagaacttaaacaacacaatacattaactgctaattatttaaatggcacaaaaaaaatt
gaaattcctaaaaaaagaagaaaaggaaatgggcatacaattacattatctggtgcaaca
ggaaataatttaaaaaacattagtgtcgatttccctctagggaaacttatttgtgttaca
ggggtttcaggaagtggaaaatcaacactaataaatgaaacgctgtatccaattttaaac
aaatatatctatagaggcgttaaaaaacctatgccctataaatcaattaaaggattagaa
cacatagacaaagtaattgctattgatcaatcaccaattggaagaacaccacgctcaaac
ccagcaacttatacaggtgtttttagtgaaattagaaacttatacgctaaaacaagtgaa
gcagcaataagaggttataaacctgggaggttttctttcaacgttaaaggtggaaggtgt
gaaacctgccaaggtggtggtgtaagagttattgaaatgagttttttgcccgatgttcac
gttgaatgcgaaacctgccaaggaaagcgttttaacagagaaacattagaaattagatac
aaaggaaaatcaatttcagatgtattaaatatgaccattgatgatgctgtatcttttttt
gaaaatatccctaaaattcacaggaaattaaaaaccattcatagtgttggtttaggatat
ataacacttgggcaacaatctacaactttatcagggggtgaagcgcagcgcataaagcta
gcttcagaattatctaaaagagatactgggaatacattttatattttagacgagccaaca
actgggctacattttgaagatatacgcgttttaatgatagtgctaaataaactagtcaac
aagggaaataccgtacttataattgaacataatttagacgttataaagctagcggattac
gtgattgatattggtatggaaggtgggaaaaatggtggacaactaatttgttttggaacc
ccagaaaaagttagtaagcataaaaaaagttatactgcacaattcttaaaaaaagaatta
aattag
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