Limosilactobacillus vaginalis: LV515_00965
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Entry
LV515_00965 CDS
T06850
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lva
Limosilactobacillus vaginalis
Pathway
lva03420
Nucleotide excision repair
lva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LV515_00965
03430 Mismatch repair
LV515_00965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lva03400
]
LV515_00965
Enzymes [BR:
lva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LV515_00965
DNA repair and recombination proteins [BR:
lva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LV515_00965
MMR (mismatch excision repair)
Other MMR factors
LV515_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
UvrD_C
DEAD
AAA_30
NACHT
AAA_16
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
QFS35040
LinkDB
All DBs
Position
223646..225907
Genome browser
AA seq
753 aa
AA seq
DB search
MKQIDKQIAETKKALADAHKETRAVEKNYSENASINRYEIDDIAESRAMIEQQRQLVSRA
AESETILRRQLKTLQNLKRTPYFGRIDIQDPGKDKPETLYIGTASLMNDDKTAFLIYDWR
APISGVYYNGTLGEVRYETPNGIRETVLIKKRQFTIKDGRIVNMFDTNETVGDELLQAAL
GEQNDQYMHNIVATIQQEQNDIIRDTHSDLLLVQGVAGSGKTSAVLQRIAYLLYHSRTAL
NADQIVLFSPNRLFSHYISQVLPSLGERNMRQVTMSGFVRRRFEGLQVENIFERYEKRQR
ASKQDQRIADFLESQPAMSDIHRYATHLMDEQLQFSNITFEGRVFFTAEHIQGLYQKQPN
AMKAANRMVQLKNQLIRELQRRVKKEAKKDWVAKELDSLDTQQLHNLYGKKTVDDFRDED
EQYAYLAYRWAKRRLRIVADAIYNDYFIDIYSQYTNWLRQLSLPKEIHQNEWQQMIANYS
NELEMHRLEMMHAAPLMYLRDLLMGTGQNHSFKYVFIDEMQDYSVAMMIYLHHAFPGAKF
TVLGDSEQALFKPLELPEQLLERLSKILVAKHPNLISLRRSYRSTKEITDFAKALLPDGD
QIMSFTRHGQRPALLVRSSTDAVEQALQDSVEKYQEQYETVAVLTKNQEQAQQAYRQLRR
QFSNVHLLDMNDTELPSGILVLPVYLAKGLEFDSVIAYDVSQANLKGTDEIGMLYTMATR
AMHDLTMISNGQVSTAINEKASRQLTIEHELIR
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagatcgacaagcaaatagctgaaactaaaaaggcacttgctgatgctcacaaa
gaaactcgagcagttgaaaagaactacagtgaaaacgcctcaattaaccggtacgaaatt
gatgatattgctgaatcacgagcaatgattgaacagcagcggcagttagtttcacgagca
gctgagagtgaaacgatccttcggcggcagttaaagacactccaaaaccttaagcggaca
ccatacttcggtaggattgatattcaggatccaggtaaggataagccagaaacgttatac
attggaacggcttcgctaatgaatgatgataaaactgccttcctcatttacgattggcgg
gcaccaatttcgggtgtttactataacggaacattaggtgaggtacggtatgaaacaccg
aatggaattagagaaacggtcttaattaagaaacgccaatttaccattaaagatgggcgg
atcgttaacatgtttgatactaatgaaacggtgggggatgaattactccaggccgctctt
ggtgagcaaaatgatcaatacatgcataatattgttgcaacgatccagcaggaacaaaat
gatattattcgtgatacccatagtgatctcttgctagtacaaggggttgccgggtcgggg
aaaacttcagcagttttacaacggattgcttaccttctgtatcatagtcgaaccgcatta
aacgctgatcagatcgtcctctttagtcccaaccggctttttagccattatatttctcaa
gttttaccgagcctgggggaacgaaacatgcgtcaagtgacgatgtcgggttttgttcgg
cgccggtttgagggtttacaggtagaaaatatttttgagaggtatgaaaagcgtcaacga
gcatcgaagcaggatcaacgaattgccgacttcttagaaagtcaaccggcaatgagtgat
attcaccgctatgccacccacctaatggatgaacagcttcaatttagtaacattactttt
gaaggacgggtcttttttactgcggaacatattcaaggactttaccaaaaacagccaaat
gcaatgaaggctgctaatcgaatggttcagttaaaaaatcaattgatccgcgaacttcag
cgacgagtaaaaaaagaagcaaaaaaggattgggtagctaaggaactggatagccttgat
actcagcagcttcataatttatacggtaaaaagacggttgacgattttcgggatgaagat
gaacaatatgcctaccttgcatatcgttgggcaaaacggcggctaaggattgtcgccgat
gcaatttataatgactactttattgatatttatagtcagtacacaaattggttgcgacag
ttatcgctgcctaaagagattcatcagaacgaatggcagcaaatgattgctaattatagt
aatgaattagaaatgcaccgtttagaaatgatgcacgcggctccactgatgtacttgcgc
gatttgctaatggggactgggcagaatcattcattcaagtatgtctttattgatgagatg
caggactattcagtagccatgatgatttatctgcatcatgcgtttcccggagcaaagttt
accgtccttggcgatagtgaacaggcattgtttaagccgttagaactacctgagcaatta
ttggaacgcctgagtaagatcctagttgctaagcatcctaatctgatttcgttacgacga
agctacagatcgaccaaggaaattacggactttgctaaagcactgttgcctgatggtgat
caaataatgtcatttactcgtcatggacaacgaccagcactcctggttcgttcttcaact
gatgctgttgaacaggcgttgcaagatagtgttgaaaagtaccaagaacaatacgaaacg
gttgccgttcttactaagaatcaagagcaagcccagcaagcctaccgtcagttgcggcgc
caattttccaatgttcacttgttggacatgaacgatacggagctgccaagcggaatctta
gttctgcctgtttatctggctaaagggcttgaatttgattcagtgattgcctacgatgtt
tcgcaagcaaaccttaagggaaccgatgaaattgggatgctctatacaatggctactcga
gcaatgcatgatctgacgatgattagtaacggccaagtaagtactgctattaatgaaaaa
gctagtcgacagctaacgattgagcatgaattaataaggtaa
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