Lipotes vexillifer (Yangtze River dolphin): 103068371
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Entry
103068371 CDS
T03090
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103068371 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103068371 (COL23A1)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103068371 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103068371
NCBI-ProteinID:
XP_007463194
UniProt:
A0A340XV21
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MDRHMQGLGTESAVATTLDKGPLGLDGKPGFPGPKGEKGAPGDFGPRGDQGQDGAAGPPG
PPGARGPPGDTGKDGPRGAPGPVGAKGEAGQDGETGPSGPPGPKGEPSVPGKKGDDGTPG
QPGLPGASGPKGKPGSAGPQGENGVDRALGPKGEPGQPGTDGATGPRGPPGLKGEQGDTV
VIDYDGRILDALMGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEAGP
IGPKGEAGEMGLSGLPGADGPKGEKGDPASDALRESLAQIIVEPGPPGPPGPPGPTGLQG
IQGPKGLDGAKGEKGMSGERGPSGLPGPAGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRG
EKGDRSERGEKGERGVPGRKGMKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHKTTLLVIK
GSLNAWPGQCKAISTPWDFVHTAPLRGGGIQEIGLDTGSCGKHPKGLSPRQVPSPGGHAQ
DLLSQLQQWPCALLLPFLLLLHGAGKSKILPQGFAYLRPQLCTRLGACHTFPLNAYGSSH
FMHGEGDLGTELEAPAEAQRPPRVQEQRRGHRGALPGEGNSSGREGEDRGAFPGPGQH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggacagacacatgcagggcctgggcacagagtctgcagtggcaaccacactggacaag
gggccactgggtctggatggcaagcccggatttccaggccccaaaggagaaaagggtgca
ccaggagactttggcccccggggagatcaagggcaagatggagctgctgggcctccagga
ccccctggggcccggggccctcctggcgacactgggaaagatggccccaggggagcacca
ggcccagtgggtgccaaaggagaagctggacaagatggcgagacgggcccaagtggaccc
ccagggcccaagggtgagcccagtgttcctggaaagaagggggatgatgggacaccaggc
cagccagggctcccaggagcctcagggcccaagggcaagccagggagcgcggggcctcag
ggagagaatggtgtggacagagccctggggcccaagggggagcccggccagccaggcacc
gatggagccacagggccacggggtcccccaggcctcaagggtgagcaaggagacacggtg
gtaattgactacgatggcaggatcttggatgcccttatgggtcctcctgggccacagggg
ccccccgggccaccagggatccccggagccaagggcgaacttggattgcctggtgctcca
ggaatcgacggagagaagggtcccaaaggacagaaaggagacccaggagaagccgggcct
ataggacccaaaggggaagcaggagagatgggcctgtcaggccttccgggtgccgacggc
cccaaaggggagaagggagatccggcatctgacgccctacgggagagcctggcccagatc
atagtggaaccagggcccccaggcccccctggtcccccaggccccacgggccttcaggga
atccagggtcccaagggcttggacggagcaaagggagagaagggcatgtcgggtgagaga
ggacccagtggcctgcctgggccagctggcccgccaggccttattgggctgccgggaacc
aaaggagagaagggcagacccggggagccaggactagatggtttccctggacctcgagga
gagaaaggcgaccggagcgagcgtggagagaagggggagcgcggtgtccccggtcggaaa
ggaatgaaaggccagaagggcgagccgggacccccaggcctggaccagccatgtccagtg
ggccctgatgggctgcccgtgcctggctgctggcataagaccaccctcttggtcataaag
ggctcactcaacgcctggcccggccagtgcaaagccatcagcaccccctgggactttgtc
catactgcccccctgagagggggtggaatccaggagattgggctggacacggggagctgt
gggaagcaccctaaggggttgagcccccgccaagttccaagtcctggaggtcatgcccag
gacctcctcagtcagctccagcagtggccttgtgccctccttctgcccttcctgctgctc
cttcacggggctgggaagtccaagatcctgccccagggcttcgcctacttgaggccccag
ctgtgcaccaggctgggtgcctgtcacacgttcccactgaacgcttacggctcatcccat
tttatgcacggggaaggcgacttagggactgagctcgaggcccctgccgaggctcagaga
ccccctcgagtgcaggagcagcggcggggtcaccggggggcacttcccggggagggaaac
agcagcggccgagagggcgaggaccgtggtgcgttcccagggccggggcagcactag
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