Lipotes vexillifer (Yangtze River dolphin): 103068375
Help
Entry
103068375 CDS
T03090
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103068375 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lve03041
]
103068375 (PRPF40A)
Spliceosome [BR:
lve03041
]
Complex A
U1 snRNP components
U1 related factors
103068375 (PRPF40A)
Complex B
103068375 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
103068375
NCBI-ProteinID:
XP_007464227
UniProt:
A0A340XVM4
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MQATPSEAEAGGESPKSCVSAAQSDWTAGKPVSLLAPLIPPRSAGQPLTFSPSGRQPLRS
LLVGMCSGSGRRRSSLSPKMRPGTGAERGGLMVSEMESHPPSRGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTTSGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGSLITKSNLHAMIKAEESSKQEECTTSTAPVPTTEIPTTMSTMAAAEAAAAVVA
AAAAAAAAAAAANANASTSASSTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQL
TSTPAVQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKE
LLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKE
AKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQ
AKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFE
EHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISS
DIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFED
FVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAT
PPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKS
KKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKK
RRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELS
EGELEKRRRTLLEQLDDDQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagtgaggctgaggctgggggcgaatcgccgaagagctgcgtgtcg
gcagcgcagtctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagcgcagggcagcctttaacctttagccccagtgggcgccagccactcagatcg
cttcttgttggcatgtgtagcggcagtggccgccggcggagcagtctgagtccgaagatg
aggccggggacgggagccgagcgtggaggcctcatggtgagtgaaatggagagccatcct
ccctcgcggggtcccggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggcatg
cattatgccccaatgggaatgcatcctatgggtcagagagcgaatatgcctcctgtacct
catggaatgatgccgcaaatgatgcccccaatgggaggaccaccaatgggacaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacaacatccggt
gcaaaatcaatgtggactgaacataaatcacctgatggaaggacctactactataatact
gaaacaaaacagtctacttgggagaaaccagatgatcttaaaactcctgctgagcaactt
ttatctaaatgcccttggaaggagtacaaatctgactctggaaagccttactattacaat
tctcaaacgaaagaatcccgctgggcgaaacctaaagaacttgaagatcttgaaggatac
cagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaagcagtaaacaagaagagtgcaccacatcaacagccccagttcctacaaca
gaaattccaaccacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgct
gcagcagctgcagcagcagcagctgctgctgcagccaatgcaaatgcttccacctctgct
tctagtactgtgggtggaactgttccagttgttcctgagcctgaggttacttcgattgtt
gctactgttgtagataatgaaaatacagtaacaatttcgactgaagaacaagcacaactt
actagtacccctgctgttcaggatcaaagtgttgaagtgtctagtaataccggagaagaa
acatctaagcaggaaactgtagctgattttactcccaaaaaggaggaggaagaaagccaa
ccagcaaaaaaaacatatacttggaatacaaaggaggaagcaaagcaagcatttaaagaa
ttattgaaggaaaagcgggtaccatctaatgcttcatgggagcaagctatgaaaatgatc
attaatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaat
gcttataaagtccagacagagaaagaagaaaaagaagaagcaagatccaaatacaaagag
gctaaggaatcctttcagcgttttcttgaaaatcatgaaaaaatgacttccacaactaga
tacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcagaacgt
gatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaa
gcaaagcagttgcgaaagagaaattgggaagccttaaaaaacatacttgacaacatggct
aacgtgacatactctactacttggtctgaagcccagcagtatctgatggataatccaact
tttgcagaagatgaagaattacagaacatggataaagaagatgcgttaatttgctttgaa
gaacacattcgggctttagaaaaggaagaagaagaagaaaaacagaagagtttgcttcgg
gaaaggagacgacagcgtaaaaacagagaatcttttcagatatttttagatgaactgcat
gaacatggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttct
gacattagattcactaatatgcttggtcagccggttttttcattaggatcaactgcactt
gaccttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaagata
ataaaagacattctaaaggataaaggatttgtagttgaagtaaatactacttttgaagac
tttgtggcaataatcagttcgactaaaagatcaaccacattagatgcaggaaatattaag
ttggctttcaatagtttactagaaaaggcagaagcccgtgaacgcgaaagagaaaaagag
gaggctcggaagatgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctact
cctccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagcca
gcatttgaggatataactctagagtctgaaagaaaacgaatatttaaagattttatgcat
gtgcttgagcatgaatgtcaacatcatcattcaaagaataagaaacactctaagaaatct
aaaaaacatcacaggaaacgctcccgctctcgatcaggatcagattcagatgatgatgac
agccattcaaagaaaaaaagacagcgatcagagtctcgttctgcttcagaacattcttct
agtgctgaatctgagagaagttataagaaatcaaaaaaacataagaagaaaagcaagaag
agaagacataaatctgactctccagagtcagatgctgaacgggagaaggataaaaaagaa
aaagaccgggaaagcgaaaaagacagaactagacaaagatcagagtcaaaacacaaatca
cctaagaaaaagactggaaaggattctggtaattgggatacttctggcagtgaactgagt
gaaggggaattggaaaagcgtagaaggacccttttggagcaactggatgatgatcaataa
DBGET
integrated database retrieval system
