Lipotes vexillifer (Yangtze River dolphin): 103069542
Help
Entry
103069542 CDS
T03090
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103069542 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103069542 (CNOT6L)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103069542 (CNOT6L)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103069542 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103069542 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
103069542
NCBI-ProteinID:
XP_007455472
UniProt:
A0A340X651
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MRLIGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTA
LHLNDNYLSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYE
LGRLFQLQTLGLKGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKER
DQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQE
VETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAH
MHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVV
EYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNY
TFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP
PLLPLVNGVHLPNRR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagactaatagggatgccaaaggaaaaatatgaccctccagatcctcgcagaatttat
accatcatgtcagcagaggaggtagccaatgggaaaaaatctcactgggcagaattagaa
atctcgggtagagtgcggagcttaagtacatcactttggtcattgacacacttgacagca
ctgcacctaaatgacaattaccttagtcgcattccacctgatattgccaagcttcataat
ctggtttacctggatctgtcatccaataaactcagaagtttaccagcagaactaggaaac
atggtgtctctcagggaattgcttttaaataacaatctgttacgggttttgccttatgaa
cttggtcggctcttccagctacaaactctaggtttgaaaggcaatcctttatcacaggat
attctcaatttataccaggacccagatggaacccgaaagctactgaacttcatgcttgac
aatcttgcagttcatccagagcagcttcctccgaggccatggattacattaaaagaacga
gaccaaattctgccatcagcatcattcacggttatgtgttacaatgtgttatgtgataaa
tacgccacccggcagctatacggctattgcccatcctgggcattaaactgggaatacagg
aaaaagggaattatggaagaaattgttaactgtgacgcagatatcattagtcttcaggaa
gtggaaacagagcaatacttcactctctttctgccagcattgaaggagcgtggatatgat
ggatttttttctccaaagtcacgtgccaaaatcatgtctgagcaggagagaaagcatgtg
gatggttgtgcaatattcttcaaaacagaaaaatttacattggtgcagaagcatacagtg
gaatttaaccaagtggcaatggctaattcagatggatccgaagctatgctgaacagagtg
atgacaaaagataatattggtgtcgctgtggtattagaggtccacaaagaactatttgga
gcaggtatgaagcctattcatgctgcagacaaacagctgcttatagtggcaaatgcccac
atgcattgggacccagagtattctgatgtgaaactcattcagaccatgatgtttgtctca
gaggttaaaaacattctggagaaagcctcaagtaggcctggcagcccaactgcagatcct
aattccatcccgctggtgctatgtgcagatcttaactcattgccagattcaggtgtcgtg
gaatatttaagcaatggaggagtagctgacaaccataaagacttcaaggaactaaggtac
aacgagtgtcttatgaacttcagctgcaatggaaagaatggaagctcagaagggagaatc
acacatggcttccaactgaagagcgcctatgaaaataacttgatgccttacaccaattac
acctttgatttcaaaggcgtgattgactacattttctattccaagactcatatgaacgtg
cttggtgtcctggggcctttagatcctcaatggctggttgagaacaacatcactgggtgt
ccacaccctcacatcccttcagaccacttctcactgttaacacaacttgaactccaccct
ccactcctgcctcttgtcaatggtgttcacttgcctaatcggaggtag
DBGET
integrated database retrieval system
