Lipotes vexillifer (Yangtze River dolphin): 103071565
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Entry
103071565 CDS
T03090
Symbol
SHROOM3
Name
(RefSeq) protein Shroom3
KO
K18625
protein Shroom
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lve04812
]
103071565 (SHROOM3)
Cytoskeleton proteins [BR:
lve04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
103071565 (SHROOM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
Motif
Other DBs
NCBI-GeneID:
103071565
NCBI-ProteinID:
XP_007455480
UniProt:
A0A340X8X7
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MMRTTENFDETSATLNPNRTPRGRYVYLEAFLQGGAPWGFTLKGGLEHGEPLIISKIEEG
GKADLVSSKLRAGDEVVRINAVVLSSSRREAVSLVKGSYKTLRLLVRRDACADPDPADTG
TSESFGPEHLGSDPQHRKAAWSGGVKLRLKHRRSEPAGRPHSWHSTKFGENQPDASMMQI
SQGTIGTPWPQSYHSSSSTRDLSGYDHAYLRRSPDRCSSQGSTDSLEPSGGCPPCHPLSP
AKSTSSIEQLGHLHNKRDSAYSSFSASSSILEYPAPGISGRERSGSVDTTSARGGLLEGM
RQADIRYVKTVYDPRRGVSAEYEVNSSGLLLQGKEARALADGQGYEKWHSVPRGKEAPPP
SWSQHCPSSLETTADNLPPKVGAPLPPARSDSYVAFRQRERPGSWSSLDQKRFCRPQANS
AGPLKSPFIEEQLHTVLEKSPENSPPVKPKHNYTQKAQPGQPLLPAGIYPVPSLEPHFAQ
VPRPSVSGNGTLYPALAKEGGYPAPQGAGNKTAALDENGNQSGSSGPGFAFCQPLEHDSV
SPGERKLEVSAKCVPYKVHFLSVPENEEEASLKRLLTPLQGDSPHPSERRSTQGNRYPNY
HSLQSPPAQAWQAGEDKRSFLPSEPWEGDFHEDHNANLRRRLDRGSLGQSMPGNFGKTTS
AFSSLQNIPETLRRQSSLDLGGGAQEIYLEGTSTCTVSTKAEDSGRTVVPDHRSQLDRSV
SYPRPEGRTSALASFHSSDPRYEELPSPPPQETSSLGRRRLSSSSASALQGFQYGKPHCS
VLQKVSKIEQREQGSQRPPSAGSSSYGYNHRPNRTLPTSNTSGNDLEETKAHIRFSESIE
PLGNGEPHCKNGEPKSEEASWQPCGQQPRRDARLLRSQSTFQLFSEAEKEAVWPDDRPRT
PESPVQEAPFSRAYRNSIKDAQSRVLGATSFRRRDLEPGTPTSARPWRLRPASAHVGLRS
PEAPASASPHTPRERHSVTPAEGDPSRPAPPAARRGPRRHLTPEQKKRSYSEPEKMHEVG
VSEEAEPAPPGPPRKGPQFVESSVADRRRIFERDGRACSTLSLSGPELKQFQQSALADYI
QRKTGKRPAAAGCGLQEPGPLRERAPSAYLQAAPEGPSLAAASSLSCLREPSLPPRREAA
LQPATAEGGGGEPPRAPRDRSSSFAGGRHLGERRRGDEAPRELLSGANGGPEGPQRLDRT
PGEPSPWGSAAGRAGKSMSAEDLLERSGVQAIPVHMRSRSSPTADKRQDVLLGENNGFGL
VKDPCHLAGPGSRPFSCSSREEMLLLQHHPSPRCGVSGCKAGGGASIPGRGLGPLDPPRQ
ASRTPCPRPLPSGAQGHLPDTRAAPPSSALPAPGPSSYCSQAAAAQPCTPAGTPRNGGHW
PAQPPSPERRKEEGAGTRPSPPWVKRAHSVQEDSLPEDGASPGCASPKHYPKPQALPSPS
STSDPDTPLGVPGTLGRVSLRVSGSAPLASLSPREDNDEVFVRDLRSTATSGPACEAPPP
PSQEAPAQNLDRFPPPPPEAVCAEQWDSEGYREPHASSSKLAKVTIAKERPIPGAAHLVD
SQILASRSQTSIKSSEANETNPPSTTGALPQPAGSLSKQPSPGQPPSIQTQSLSHDPVSG
TQSLEKNVSSRPQKTSEDMRTEALAKEIVHQDKSLADILDPDSRMKTTMDLMEGLFPRDA
NLLKENSIKRKATQRTVSFPGCEAKRSEDKEAAGMLVNCPVYYSVSAPKAELLNKIKAMP
EEVNEEEEPADINEKKAELIGSLTHKLETLQEAKGSLLMDIKLNNALGEEVEAWISELCK
PNEIDKYKMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDASNEERSSLNEKRKVLAAQ
HEDARELKENVDRRQRVVLDILAHYLSKEQLQDYQHFVKMKSTLLIEQRELDDKIKLGQE
QVKCLLESLPSDFVPKAGALALPPGLARDVTATGGWTVSIFPTVASPL
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggaccacagagaacttcgatgagaccagtgccacactaaaccctaacaggacc
cccaggggaaggtacgtttatctggaagcattcctgcagggaggagctccatggggtttt
actttgaaaggtggcctggagcatggagaaccattaatcatctctaagatcgaagaaggg
ggcaaagcggacctggtgagctccaaactgcgggccggggacgaggtggtgcgcatcaac
gcggtggtgctgagcagctcgcggagggaggccgtttccctggtgaaaggatcctacaag
accctgcggctgctggtgcgcagagatgcgtgtgcagacccagaccctgcagatacaggc
acctctgagtccttcggcccagagcacctgggctctgacccccagcacaggaaagcagca
tggtcaggaggggttaaacttcggctgaagcacaggcgcagtgaacctgcgggccgacct
cattcttggcattcaaccaaatttggggagaaccaacccgatgccagcatgatgcagata
tctcagggcacgattggcactccctggccccagagctaccattccagctcctctaccagg
gacctctccggctatgaccatgcttatctgaggcggagccccgaccggtgcagctcccag
gggagcacggacagcctggagcccagcgggggatgcccgccctgccaccctctctccccg
gccaagtctaccagcagcattgagcagcttggccacctccataacaagagagactcggct
tacagctccttctccgccagttctagcatcctcgaatatccggcccccggcatctctggc
cgggagcgttcaggctccgtggacaccacttctgctcgaggtggcctcctagaagggatg
aggcaggcagacattcgctatgttaagacagtctatgatccccggaggggggtctcagca
gagtatgaggtgaactcttcaggcctgctcctgcaaggaaaggaggcccgagcattggca
gatggtcagggatatgagaaatggcatagtgttcctcggggcaaggaagcgccacccccc
tcctggagccagcactgccccagctccttggagaccaccgcggacaacttgcctcctaaa
gtgggtgcacccctgcccccggctcggagtgacagttatgtggcctttcggcagcgagag
cggcctggctcctggtctagccttgatcagaaacggttctgccggcctcaggcaaactct
gcaggccccctgaaatctcccttcatagaggaacagctgcatactgtgctggagaagagt
ccagaaaacagccccccagtgaagcccaagcataattacacccagaaggcccaacctggc
caacctctgctgccggctggcatctacccggtaccttccctggagccacactttgcccag
gtgccccggccttccgtgagtggtaacggcaccctctaccctgcgctggccaaggagggc
gggtatccagctccacagggagctggcaacaagacggccgcccttgatgagaatgggaac
caaagtggatctagcgggcctggctttgccttctgccagcccctagaacatgactcggtg
tccccaggagagaggaaacttgaagtttcagccaaatgtgtcccctacaaagtccatttc
ctctcagtgcctgaaaacgaggaggaggcctccctgaagagacttctcacacctctccaa
ggcgacagcccacatcccagtgagagaaggagcacccagggcaacagatatcctaattac
cacagcctccagtcccctccggctcaggcctggcaagcgggtgaagacaagagatctttc
ctgccctcagagccttgggagggggatttccatgaagaccacaatgccaacctccggcgg
aggctcgacagaggcagcctgggccagagcatgccaggcaactttggcaagaccacatct
gccttctcctccctccaaaacattcccgagactctaagaaggcaaagcagcctggatcta
ggagggggcgcccaggagatctacctggaaggcacgtccacctgtacagtcagcaccaag
gcagaggactctggaaggactgttgttcctgatcacaggagccagctggacaggtcagtt
tcctatcccaggcctgaggggagaaccagtgccttggcttcgttccacagttcagaccca
aggtatgaagagctgccctccccgcccccacaggagacatccagtctgggccgaaggagg
ctcagctccagcagcgcctcggctctgcagggctttcagtatgggaagccccactgctcc
gtgctgcagaaggtttccaagatcgagcagcgagagcaagggagccagagacccccgagt
gcgggcagctctagttacggttataaccacaggcccaaccggacactcccaacttctaat
acttcggggaatgacttggaggagacaaaggcccatatccgtttttccgaatccattgaa
cccctaggcaatggggagccgcactgcaaaaacggggagccgaagtcggaagaggcttcc
tggcagccgtgtggtcagcagccgaggcgggacgctcgcctgctccgcagccagagcacc
ttccagctcttcagcgaggcggagaaggaggccgtgtggcccgatgaccggccccgcacg
ccagagtcgcccgtgcaggaagcccccttcagccgcgcctaccggaacagcatcaaggat
gcgcagtcccgcgtcctgggcgccacctcctttcgacgccgggacctcgagccggggacc
cccacatctgccaggccctggcggctgcgacccgcctccgcccacgtggggctgcggagc
ccggaagcgccggcttccgcctccccgcacaccccgcgcgagcggcacagcgtgaccccg
gccgagggcgacccttcccggcccgcgccccccgccgcccggagggggccgcgccggcac
ctgacccctgagcagaagaagcgctcgtactcggagcccgagaagatgcacgaggtgggg
gtgtcggaggaggccgagccggcgcccccgggcccaccaaggaaggggccgcagttcgtg
gagagctcggtggctgaccggcgccgcatcttcgagcgagacggcagggcctgctccacc
ctcagcctgtcggggcccgagctgaagcagttccagcagagcgcgctggccgactacatt
cagcgcaagaccggcaagcggcccgctgccgccggctgcggcctccaggagcctgggccg
ctgcgggagcgcgccccgagcgcctacctccaggccgcgcccgagggccccagcctcgct
gctgcctccagtctctcctgtctgcgggagcccagcctgccgccccgcagggaggccgcc
ctccagccggccaccgcggaagggggtggcggggagccgccacgggccccccgagatcgc
agcagctcctttgccggcggccgccacctcggggagcggcgccgcggagacgaagccccg
agagaactgctcagtggtgctaacggtggtccagagggcccccagaggctggacaggacc
cctggggagccctccccgtgggggtccgcggccgggagggccgggaagtccatgtcggcc
gaggacctgctggagcgctcaggcgtccaggccatccctgtccacatgaggtcacggtca
tctcccaccgcagacaagcgccaggatgtgcttttgggggaaaacaatggctttggtctt
gtgaaggatccatgtcatttggctggcccaggatccaggccattcagctgttccagccgt
gaagagatgttgttgctccaacaccatcccagccctcgttgcggggtttcgggctgcaaa
gcaggtggtggtgcctccattcccggcaggggtctgggaccgctggaccctccaaggcag
gccagcagaacgccctgcccccggcccctgccctcaggagcgcaagggcatctcccggac
accagggctgcaccgccgagctcagccctgcctgcccctggcccctcgagctactgctca
caggccgccgccgcccagccctgcaccccagccgggacccccagaaatggcggccactgg
ccggcccagcctcccagccccgagcgcaggaaggaggagggagcagggacgcggccctcc
ccgccctgggtgaagagggcccactcggtccaagaggacagcctccccgaggatggcgca
tcgcctgggtgcgcgagccccaagcactaccccaagccgcaggccctccccagcccgagc
agcacttccgacccagacacgcccctcggggtcccgggcactctgggcagggtctccctc
cgggtctctgggtcggccccgctggcctccctgtcgcctcgggaggacaacgacgaggtg
ttcgtgagggacctgcgctccaccgccacttccggccccgcctgcgaagcgccgcccccg
cccagccaggaagccccggcccagaacctggaccgctttcctccgcctccccctgaagct
gtgtgcgcggagcagtgggacagcgagggctaccgggagccccacgccagctccagcaaa
cttgccaaggtgacaattgccaaggaaaggcccatccctggtgcagcccatttggttgat
agtcagatactggcttccagatcccaaacctccatcaagagttcagaggccaatgagacc
aacccaccctccaccaccggtgctctaccccagcctgccggctctcttagcaaacagcca
agcccagggcagccaccttccatccagacccaaagcctcagccacgacccagtcagtggg
actcaaagtttagaaaagaatgtcagttctcgtcctcagaagacctcagaagacatgaga
acagaggctctggccaaggaaattgtccaccaagacaaatctctggcagacattttggat
ccagactccaggatgaagacaactatggacctgatggaaggtttgtttccgcgagatgct
aatctgctgaaggaaaacagcataaagaggaaggccacgcagagaactgtcagcttccca
ggatgtgaagctaagaggagtgaagacaaggaagcagcgggcatgttggtcaactgtcct
gtctactacagcgtgtctgctcccaaggccgagcttctgaacaaaatcaaagctatgcca
gaggaggtgaatgaggaagaggagccggcagacatcaacgaaaagaaggcggagttgatt
ggaagcctcacccacaagcttgagaccctccaggaagccaaggggagcctgctgatggac
atcaagctcaataacgccctgggggaagaggtagaggcctggatcagtgagctctgcaag
cccaatgagatcgataagtacaagatgttcatcggggacttggacaaggtggtgaacctg
ctgctctccctctcggggcgcctggcccgtgtggagaacgtccttagtggccttggtgaa
gacgccagtaacgaggaaaggagctctctcaacgagaagaggaaggtcctggctgcgcag
cacgaggacgcccgggagctcaaggagaatgtggaccggaggcaacgcgtggtgctggac
atcctggcccattacctttccaaggagcaactccaggattaccagcattttgtgaaaatg
aagtcgacactcctcatcgagcagcgggagctggacgacaagatcaagctgggccaggag
caggtcaagtgtctgctggagagccttccctcggatttcgtgcccaaggcaggggccctg
gctctgcccccaggcctcgcccgtgacgtgactgccacgggagggtggactgtcagtatt
tttccaacagtagcctctccactttaa
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