Lipotes vexillifer (Yangtze River dolphin): 103072166
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Entry
103072166 CDS
T03090
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve01522
Endocrine resistance
lve04110
Cell cycle
lve04218
Cellular senescence
lve04934
Cushing syndrome
lve05160
Hepatitis C
lve05161
Hepatitis B
lve05163
Human cytomegalovirus infection
lve05165
Human papillomavirus infection
lve05166
Human T-cell leukemia virus 1 infection
lve05167
Kaposi sarcoma-associated herpesvirus infection
lve05169
Epstein-Barr virus infection
lve05200
Pathways in cancer
lve05203
Viral carcinogenesis
lve05207
Chemical carcinogenesis - receptor activation
lve05212
Pancreatic cancer
lve05214
Glioma
lve05215
Prostate cancer
lve05218
Melanoma
lve05219
Bladder cancer
lve05220
Chronic myeloid leukemia
lve05222
Small cell lung cancer
lve05223
Non-small cell lung cancer
lve05224
Breast cancer
lve05225
Hepatocellular carcinoma
lve05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103072166 (RB1)
04218 Cellular senescence
103072166 (RB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103072166 (RB1)
05207 Chemical carcinogenesis - receptor activation
103072166 (RB1)
05203 Viral carcinogenesis
103072166 (RB1)
09162 Cancer: specific types
05212 Pancreatic cancer
103072166 (RB1)
05225 Hepatocellular carcinoma
103072166 (RB1)
05226 Gastric cancer
103072166 (RB1)
05214 Glioma
103072166 (RB1)
05220 Chronic myeloid leukemia
103072166 (RB1)
05218 Melanoma
103072166 (RB1)
05219 Bladder cancer
103072166 (RB1)
05215 Prostate cancer
103072166 (RB1)
05224 Breast cancer
103072166 (RB1)
05222 Small cell lung cancer
103072166 (RB1)
05223 Non-small cell lung cancer
103072166 (RB1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
103072166 (RB1)
05161 Hepatitis B
103072166 (RB1)
05160 Hepatitis C
103072166 (RB1)
05163 Human cytomegalovirus infection
103072166 (RB1)
05167 Kaposi sarcoma-associated herpesvirus infection
103072166 (RB1)
05169 Epstein-Barr virus infection
103072166 (RB1)
05165 Human papillomavirus infection
103072166 (RB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
103072166 (RB1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
103072166 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lve01009
]
103072166 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lve03000
]
103072166 (RB1)
Protein phosphatases and associated proteins [BR:
lve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103072166 (RB1)
Transcription factors [BR:
lve03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
103072166 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
TFIIB
RuvC_1
Motif
Other DBs
NCBI-GeneID:
103072166
NCBI-ProteinID:
XP_007466499
UniProt:
A0A340Y490
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MPPKTPRRAAAAAAAAAAAEPPPPPPPPPPEEDPEQDSGPEDLPLARLEFEETEEPDFTA
LCQKLRIPDHVRERAWLTWEKVSSVDGVLEGYVQKKKELWGICIFIAAVDLDEMPFTFTE
LQKNIETSVYKFFDLLKEIDTSIKVDNVMSRLLKKYNVLCALYSKLERTCELIYLSQPSS
SISTEINSMLVLKVSWLTFLLAKGQVLQMEDDLVISFQLMLCVLDYFIKLSPPTLLKEPY
KTAVIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFIPF
MNSLGIVASNGLPEVESLSKQYEEIYLKNKDIDARLFLDHDKTLQADPTDSFEMQRTPRK
SNPDEEVNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRV
KDIGYIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLND
NIFHTSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAE
ANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAKDREGPADHLEPACTLNLPLQNN
HTAADMYLSPVRSPKKKGSTTRVNSTANSEAQATSAFQTQKPLKSTSLSLFYKKVYRLAY
LRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDL
KFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSVFMQRLKTNILQYASTRPPTL
SPIPHIPRSPYKFSSSPLRVPGGNIYISPLKNPYKISEGLPVPTKMTPRSRILVSIGESF
GTSEKFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDEADGSKHLPGESKFQQ
KLAEMTSTRTRMQKQKMNDSTDTSNREEK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaagaccccccgtagagcagcagccgccgccgccgccgccgccgccgcggag
cccccgccgcctcccccgccgccccctcctgaggaggaccccgagcaggatagcggcccc
gaggacctgcctctggccaggcttgagtttgaagaaactgaagaacctgattttactgca
ttatgtcagaaattaaggataccagatcatgtcagagaaagagcttggttaacttgggag
aaagtttcatctgtggatggagtcttggaaggttatgttcaaaagaaaaaggaactatgg
ggaatctgtatctttattgcagcagttgacctagatgagatgccattcactttcactgag
ctgcagaaaaacattgaaaccagtgtctataaattttttgacttactaaaagaaatcgat
accagtatcaaagttgataatgttatgtcaagactgttgaagaaatataatgtgttgtgt
gcgctctacagcaaattagaaagaacatgtgaacttatatatttgtcacaacccagcagt
tcgatatctacggaaataaattctatgttggtgctaaaagtttcttggctcacgttttta
ctagctaaagggcaagttttacaaatggaagatgatctggtgatctcatttcagttaatg
ctgtgtgtccttgactattttatcaaactctcacctcccacattactcaaagaaccatac
aaaacagctgtaatacctattaatggttcacctcgaacaccaaggcgaggtcagaacagg
agtgcacggatagcaaaacaactagaaaatgatacaagaattattgaagttctctgtaaa
gaacatgaatgtaatatagatgaggtgaaaaatgtttatttcaaaaattttatacctttt
atgaattctcttggaattgtagcttctaacggacttccagaggtggaaagtctctctaaa
caatatgaagaaatttaccttaaaaacaaagatatagatgcaagattatttctggatcat
gataaaactcttcaggctgatcctacagacagttttgaaatgcagagaacaccacgaaaa
agtaaccctgatgaagaggtgaatgtgattcttccacagactccagttcggactgtcatg
aatactatccagcaattaatgatgatcttaaattcagcaagtgatcaaccgtcagaaaat
ctgatttcctattttaataattgcacagtgaatccaaaggaaagtatcctgaaaagagtg
aaggatattgggtacatctttaaagagaaatttgctaaagctgtgggacagggatgtatg
gaaattggatcacagcgatacaaacttggagtccgattgtattaccgagtaatggaatcc
atgcttaaatcagaagaagaacgattatccattcaaaattttagcaaactcctgaatgac
aacatctttcatacgtctttgttggcttgcgctcttgaggttgtaatggctacatatagc
agaagtacatctcagaatctggatactggaacagatttgtccttcccttggattctgaat
gtacttaatttaaaagcttttgatttttacaaagtgattgaaagttttatcaaagcagaa
gccaacttgaccagagaaatgattaaacatttagaacgatgtgaacatcgaatcatggaa
tcccttgcatggctctcagattcacctttatttgatcttattaaacaagcaaaggaccga
gaaggaccagctgatcaccttgaacctgcttgtactctcaaccttcctctccagaataat
cacactgcagcagatatgtatctttctcctgtaagatccccaaagaaaaaagggtcaact
acacgtgtaaattctactgcaaattcagaggcacaagcaacctcagccttccagactcag
aagccattgaaatctacctccctttcactcttttacaaaaaagtgtatcgactagcatat
cttcgactaaataccctgtgtgcacgccttctgtctgaccacccagaactagaacatatc
atctggacccttttccaacacacactgcagaatgagtatgaactcatgagagacaggcat
ttggaccagattatgatgtgttccatgtatggcatatgcaaagtgaagaatatagacctt
aaattcaaaatcattgtaacagcatacaaagatcttcctcatgctgttcaggagacattc
aaacgtgttttgatcagagaagaggagtatgattctattatcgttttctataattcagtc
ttcatgcagagactgaaaacaaatattttgcagtatgcttccaccaggccccctaccttg
tcaccaattcctcacattcctcgaagcccttacaagttttctagctcacctttacgggtt
cctgggggcaacatctacatatcacccctgaagaatccgtataaaatttcagaaggtctg
cctgtgccaacaaaaatgactccaagatcaaggatcttagtatcaattggtgaatcattt
gggacttctgagaagttccagaaaataaatcaaatggtgtgtaacagcgaccgtgtgctc
aaaagaagtgctgaaggaagcaaccctcctaaaccactgaaaaaactgcgctttgacatt
gaaggatcggatgaagcagatggaagtaaacatctcccaggggagtccaaatttcaacag
aaactggcagaaatgacatctactcgaacacgaatgcaaaagcagaaaatgaatgatagc
acggatacctcaaacagggaagaaaagtga
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