Lipotes vexillifer (Yangtze River dolphin): 103072225
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Entry
103072225 CDS
T03090
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04330
Notch signaling pathway
lve05017
Spinocerebellar ataxia
lve05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103072225 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
103072225 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
103072225 (ATXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
103072225
NCBI-ProteinID:
XP_007461338
UniProt:
A0A340XIT5
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRPSEDKATAVPSDNHRAEGVAWLPGHASGRGHAGGRL
GPAGPPAELGLQQGIGLHKALSAGLDYSPPSAPRSVPATTTMPAYPPPQSGAPVSPVQYA
HLPHTLQFIGSSQYGGPYAGFIPSQLISPTASPVTSAVASAAGAATPSQRSQLEAYSTLL
ANMGGLSQASGHKAEQQQHLGRTAGLLPPGSPPPTQQNQYMHISSSPQSAARPASPPAIP
VHLHPHQTMIPHTLTLGPSPQVVVQYTDSGSHFVTREATKKAESSRLQQGVQAKEILNGE
MEKGRRYGAPTAADLGLVKAGGKAVPHPYESRHVVVHPSPADYGSRDSSGVRASVMVLPN
SSTPAADLEVQQVTHREASPSALSDKSGLHLGKPGHRSYALSPQQALGPEGVKAAAVATL
SPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSSQQQAITYAGGLPPHLVLPGTQ
PLLIPVGSADMEGSGAASAIVTSSPQFAAVPHTFVTTALPKSENFSPEALVTQAAYPAMV
QAQIHLPVVQSVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDL
KIDSSTVERIEDSHSPGVAVIQFAVGDHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQL
FDLPCSKLSVGDVCISLTLKNLKNGSVKKGQAVDPASVLLKHSKTDGLAGSRHRYAEQEN
GINQGSAQMLSENGELKFPEKIGLPAVPLLTKIEPSKPAATRKRRWSAPESRKLEKSEDE
PPLTLPKPSLISQEVKICIEGRSNVGK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcgcagtaacgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggccctcggaggacaaggccacggctgtgcccagcgacaaccaccgcgcg
gagggcgtggcatggctcccgggccatgcgagcggccggggccacgcgggcgggcggcta
gggccggcggggcccccggcagagctcggtttacagcagggaataggtttacacaaagcg
ctgtccgcggggctggactactccccgcccagcgcgccccggtccgtcccggcgaccacg
acgatgcccgcgtacccgcccccgcagtccggggccccggtgtcgcccgtgcagtacgcc
cacctgccgcataccttacagttcatcggctcttcccagtacggcgggccctacgccggc
ttcatcccttctcagctgatctcccccacggccagccccgtcaccagtgcggtggcctcg
gccgcgggggccgccactccatcccagcgctcccagctggaggcctattctaccctgctg
gccaacatgggcggtctgagccaagcctcgggacacaaggctgagcagcagcagcacttg
ggcaggaccgcggggctcctgccccccgggtccccaccacccacccagcagaaccagtac
atgcacatctccagctctccgcagagcgccgcgcgcccggcctccccgccggccatcccc
gtccacctgcacccgcaccagacgatgatcccgcacacgctcaccctggggccctcccct
caggtcgtcgtgcagtacaccgactccggcagccactttgtcacccgcgaggccaccaag
aaagccgagagcagccggctgcagcagggcgtgcaggccaaggagatcctgaacggggag
atggagaagggccgcaggtacggggcgcccaccgcggccgacctgggcctggtgaaggcg
ggcggcaaggccgttccccacccgtacgagtccaggcacgtggtggtccaccccagccct
gccgactacggcagccgcgattcctccggggtgcgggcctctgtgatggtcctgcccaac
agtagcacccctgccgccgacctggaggtgcagcaggtcacccaccgagaggcctcccct
tccgccctcagcgacaaaagcggcctgcacctagggaagcccgggcaccgatcctatgcg
ctgtctccccagcaggccctgggccccgaaggcgtgaaggctgctgccgtcgccacgctg
tccccccacacggtcattcagaccacacacagtgcttcggagcccctcccggttggactg
ccggccacagccttctacgcagggactcagccgcccgtcatcggctacctgagcagccag
cagcaagcgatcacctacgccggcggcctgcccccgcacctggtcctccccggcacccag
cccctgctcatccctgtgggcagtgctgacatggaggggtcgggtgcggcctcggccatc
gtcacgtcgtcgccccagtttgctgcagtgcctcacacgttcgtcaccaccgcccttccc
aagagcgagaacttcagccccgaggccctggtcacgcaggccgcctacccagccatggtg
caggcgcagatccacctgcccgtggtgcagtcggtggcgtcccctgcagccgcgccccct
acgctgcctccttacttcatgaaaggctccatcatccaactggccaacggggagctgaag
aaggtggaggacttaaaaacggaagacttcatccagagtgcagagatcagcaacgacctg
aagatcgactccagcactgtggagaggatcgaggacagccacagcccgggcgtcgccgtc
atacagttcgctgtcggggatcaccgagcacaggtcagcgtggaagttttggtagagtat
cctttttttgtgtttggacagggctggtcatcctgttgcccggagagaaccagccagctc
tttgatttgccgtgttctaaactctccgttggggatgtctgtatctcgctcaccctcaag
aacctgaagaatggctctgttaaaaagggccaggccgtggatcccgccagtgtcctgctg
aagcactcaaagaccgacggcctcgcgggcagtagacacaggtacgccgagcaggaaaac
gggatcaatcagggaagtgcccagatgctctctgagaatggcgaactgaagtttccagaa
aaaattggattgcctgccgtgcccttgctcaccaaaatagaacccagcaagcccgcggcc
acgaggaagaggaggtggtcggcgccggagagccgcaaactggagaagtcggaagacgag
ccacctttgactcttcctaagccttctctcatttctcaggaggttaagatttgcattgaa
ggccgctctaatgtaggcaagtag
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