Lipotes vexillifer (Yangtze River dolphin): 103072661
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Entry
103072661 CDS
T03090
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103072661 (COL8A1)
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Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
103072661
NCBI-ProteinID:
XP_007453270
UniProt:
A0A340X2C5
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Position
Unknown
AA seq
745 aa
AA seq
DB search
MAGPPALLQLLGVLLTISLGSVRLIQAGAYYGIKPLPPQIPPQIPPQIPQYQPLGQQVPH
MPLGKDGLNVGKELPHMQYGKEYPHLPQYMKEIQPAPRMGKEAAPKKGKAEIPLASLRGE
QGPRGEPGPRGPPGPPGLPGQGIPGIKGKPGPQGYPGIGKPGMPGMPGKPGAMGMPGAKG
EIGPKGEMGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGAKGERGPKGPPGPPGLQGP
KGEKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQG
PIGVPGFQGPPGMPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGPPGIGKPGFPGPK
GDRGIGGLPGALGPRGERGPTGAPGLGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGAV
GPQGPLGPKGEPGLQGFPGKPGFLGEAGPPGMRGLPGPIGPKGEAGHKGLPGLPGAPGLL
GQKGEPGIPGEQGLQGPPGIPGIAGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGVAG
LHGAPGKPGALGPQGQPGLPGPPGPPGPPGLPAVMPPTPPPHGEYLPDMGLGIDGVKTPH
AYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPG
VYYFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMP
SEQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggctggtccacctgcccttctgcagctgctgggagtactgcttaccatttccctgggt
tccgtccgactcatccaagctggtgcctactatggcatcaagccgctgccacctcaaatt
cctcctcagattccaccgcaaattccgcaataccagcccctgggccagcaagtacctcac
atgcctttgggtaaagatggccttaacgtgggcaaggagctgccccacatgcagtatggc
aaagagtatccacatctaccccaatatatgaaggaaattcagccggcaccaagaatgggc
aaggaagcagcacccaagaaaggcaaagcagaaataccattagccagtttacggggggag
caaggtccccgtggagagcctggcccaagaggaccacctgggccccctggcttaccaggt
caagggatacctggaatcaaaggaaaaccagggccacagggatatccaggaattggaaag
ccaggtatgcctggaatgccaggaaagccaggagccatgggaatgcctggggccaaaggt
gaaattggacccaaaggggagatgggacccatggggatcccaggaccgcaaggacctcca
gggcctcacggacttcctggcattgggaagccaggtgggccagggttaccagggcaacca
ggtgccaaaggtgagcgaggacccaaaggaccaccaggacctccaggccttcagggtcct
aaaggagagaagggcttcgggatgccaggtctgccaggcctgaagggtcctccagggatg
catggccctcccggccctgtgggacttccaggagtgggcaaaccaggagtgacaggcttc
cctgggccccagggccccctgggaaagccaggccctccaggcgaacctgggccacaaggc
cctataggggtcccagggtttcaaggacctcctgggatgcctggaattggaaaaccaggc
caggatgggatccctgggcagccaggatttccaggtggcaaaggggaacaaggactgcca
ggactgccaggacccccaggccctccagggatcgggaaacccggcttcccaggccccaaa
ggcgacaggggcatagggggtcttcctggggctctgggaccaagaggcgagagaggacca
acaggtgcccctggattggggggcccaccaggagagccaggcctgcctggaatcccaggt
cccatgggtcctccaggggctatcggtttccccgggcccaaaggagaaggtggggctgtt
ggaccacaggggccactaggtcccaagggtgagccagggcttcaaggcttcccaggaaag
ccaggtttccttggtgaagctgggccccccggcatgaggggtttgccaggtcccataggg
cccaagggggaagctgggcataaaggtttgccagggctccctggtgccccagggctgctt
ggacagaagggagagccaggaatcccaggggaacagggcttacagggccccccaggtatc
ccagggattgcaggcccgagtggccccattggaccgcctggaattcctggccccaaaggg
gaaccgggtctcccagggccacctgggttccctggagtagggaagcccggagtagcagga
cttcatggcgccccagggaagcctggtgcccttggcccccaaggccagcctggccttcca
gggcccccaggccctccagggcccccgggactcccagctgtgatgcccccgacaccacca
ccccatggagagtatctaccagatatggggctgggaattgacggagtgaaaaccccccac
gcctatggggctaagaaaggcaagaacggagggccagcctacgagatgcctgcatttacc
gctgagctgactgcacctttcccacccgtgggggccccagtgaagtttgacaaactgctc
tataacggcagacagaactacaacccgcagacgggcatcttcacctgtgaggtccctggg
gtctactactttgcataccacgttcactgcaaggggggcaacgtgtgggttgctctgttc
aagaacaacgagcccatgatgtacacgtatgacgagtacaagaagggcttcctggaccag
gcgtccgggagcgcggtgctgctgctccggcccggagaccgcgtgttcctccagatgccc
tctgaacaggctgcgggactgtatgccgggcagtacgtccattcctctttttcagggtat
ttattgtatcccatgtaa
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