Lipotes vexillifer (Yangtze River dolphin): 103074668
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Entry
103074668 CDS
T03090
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04613
Neutrophil extracellular trap formation
lve05014
Amyotrophic lateral sclerosis
lve05034
Alcoholism
lve05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
103074668 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103074668 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103074668 (HDAC6)
09165 Substance dependence
05034 Alcoholism
103074668 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lve01009
]
103074668 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103074668 (HDAC6)
04131 Membrane trafficking [BR:
lve04131
]
103074668 (HDAC6)
03036 Chromosome and associated proteins [BR:
lve03036
]
103074668 (HDAC6)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103074668 (HDAC6)
Protein phosphatases and associated proteins [BR:
lve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103074668 (HDAC6)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103074668 (HDAC6)
Membrane trafficking [BR:
lve04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103074668 (HDAC6)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103074668 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103074668
NCBI-ProteinID:
XP_007450942
UniProt:
A0A340WTN2
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHPPAHDSSVTSKRGVKKGAVLRSSPSLAEVKKKGRMKKLS
QAAEQDLVVGLQGLDLNREARTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEHLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLRAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLTASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVSLEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPVLEFPGAPCPSA
QASISCALEALEPFWEVFVRSAETLEEEDTVEGDDVEKEAEGPWQPPELPILTWPVLQAR
TGLVYDPQMMDHYNLWDNHHPETPQRIKRIMHHLEELGLAGRCLALPARPATDAELLACH
SAEHVDRLRATEKMKTRELHREGANYDSIYICPSTFTCAQLAAGAACRLVEAVLAGEVLN
GIAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAVSGRVLRILIVDWDVHHGNGTQHIF
EEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGPRLGDADYLVAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGSCQVSPEGYAHLTHLLMGLANGRIILILEG
GYNLTSISESMAACTHSLLGDPPPLLTLLRPPLSGALASITETIQVHRRYWCSLRVTKVK
DKEGPSSSKLITKKAPQAANPLSAKGMTMPEGNILEAGTGKTTSATSVKESTPGQTTSET
AVMEFTQDQSSETAMGGAAALNQATSEAATGDVTLDQTTSEEAVGGAELIQSPPASCTDN
QTPPASPVQGATIQISPSKLTGNLRTLELDKAQEPPEEEELLGEAAGGQDMNESVLMHVT
GDHADTDQAMFYAVTPLPWCPHLVAVCPVPEAGLDVTQPCKDCGALQENWVCLSCYQVYC
SRYINAHMLQHHEGSGHPLVLSYADLSTWCYHCQAYVHHKALLAVKNIAHQNKFGENMLH
SH
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaccagacagcgaaggagtaggcacaatccc
catcctcccgcccacgactccagcgtcacctcgaagcgaggtgttaaaaagggtgccgta
ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttagt
caagcagccgagcaagacctagtcgtggggctgcaagggctggatctgaaccgggaggcc
aggacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgagcggctccatgctatcaaggaacatctgatc
caggagggcctcctggatcgctgtgtgtcctttcaggcccgatttgccgaaaaggaggag
ctgatgttggttcacagtctagaatacattgatctgatggagacgacccagtacatgaat
gagggggaactccgtgtcctagcagatacctatgactcagtttatctgcatccgaactca
tacacctgcgcctgcctggcctcaggctccgtcctcaggctggtggatgcagtcctgagg
gctgagatccggaatggcatggcgataatcaggcctcctggacaccacgcccagcacagt
ctcatggacgggtattgcatgttcaaccacgtggctgtggctgcccgctatgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgtgcaccatggtcaaggaaca
cagttcacctttgaccaagaccccagtgtcctctatttctccatccaccgctacgagcag
ggtcggttctggccccaccttacagcctccaactggtccaccacaggttttggccaaggc
cagggatacaccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacatc
gccgctttcctgcacgtcctgctgccagtttcccttgagttccagccccagctggtcctg
gtagctgctggatttgatgccctccaaggggaccccaagggcgagatggccgccactccg
gcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctc
tcactggagggtggctacaacctccgctccctggctgagggcgtcagcgcctcgctccac
acccttctgggagacccttgccccgtgctggagttccctggcgccccttgcccgagtgcc
caggcatcgatctcctgtgctctggaagcccttgagcccttctgggaggtcttcgtgaga
tcagctgagaccctggaggaggaggacactgtggagggggacgatgtggagaaggaggcg
gagggaccgtggcagccccctgagctcccaatcctgacgtggccggtgctgcaggctcgc
acagggctggtctatgacccacagatgatggatcactacaacttgtgggacaaccaccac
cccgagacgcctcagcgcatcaagcgcatcatgcaccacctggaggagctgggtcttgcc
gggcgctgtctcgccctgcccgcacgtccagccacggacgctgagctgctcgcctgccac
agtgctgagcacgtggatcgtctgcgggccacagagaagatgaagacccgggagctgcac
cgcgagggcgccaactatgactccatctacatctgccccagcaccttcacctgtgcgcag
ctggctgctggcgccgcctgccgcctggtggaggctgtgctggcgggagaggttttgaat
ggcattgctgtggtgcgtccccccggccaccatgcagagcgggatgccgcttgcggtttc
tgcttcttcaactctgtggctgtggctgctcgccatgcccaggccgtcagtgggcgtgtg
ctgcggatcctgatcgtggactgggacgtccatcatggtaatggaactcagcacatattt
gaggaggaccccagcgtgctgtacatttctctgcaccgctatgaccatggcaccttcttt
cctatgggggacgagggcgccagcagccagataggtcaggctgcaggcacgggcttcact
gtcaacgtggcctggaatgggccccgcttgggtgacgccgactacctggttgcctggcat
cgtctggtgcttcccattgcctatgagtttaacccggagctggtgctggtctcagctggc
ttcgatgctgcccggggggacccactgggcagctgccaggtgtcgcctgagggctatgcc
cacctcacccacctgctgatgggcttggccaatggccgcattatccttatcctagagggt
ggttataacctgacatccatctcagagtccatggccgcctgcacccactccctccttggg
gatccgccacccctgctgaccctgctgcggcccccactgtcaggggccctggcctcgatc
actgagaccatccaagtccatcgcagatactggtgtagtttgcgggtcacaaaggtcaaa
gataaagagggaccctccagttctaagttgatcaccaagaaggcaccccaggcagccaat
cctttgtcagccaaggggatgaccatgccagaagggaacattctggaggcaggcacaggg
aagaccacctcagcaacatctgtgaaagagtccactccaggccagactacgtcagagaca
gctgtgatggagttcactcaggaccagtcatcagagacagccatgggaggagctgctgcg
ctgaaccaggccacctcagaggcagccacaggggatgtcacgctggaccagaccacctcg
gaggaggctgtggggggagctgagctgatccaaagccctccagcctcatgcactgacaat
cagactcctccagcgtcacccgtgcaaggagccacaatccagatatcccccagtaagctg
actggaaatctcaggaccttggaactagacaaggcacaggaacccccagaagaggaggag
ctactaggagaggcagctggaggtcaggacatgaatgagtcagtactgatgcatgtcact
ggagaccatgctgacactgaccaagccatgttttatgctgtaacaccactgccctggtgt
ccccatttggtggcagtatgccctgtacctgaagcaggcctggatgtgacccaaccttgt
aaggactgtggagcactccaggagaactgggtgtgtctgtcttgctaccaggtctactgc
agtcgttacatcaatgcccatatgctccaacaccatgaaggctcgggacacccgctggta
cttagctacgccgacctgtctacctggtgttaccactgtcaggcctacgttcaccacaag
gctctcctagctgtgaagaacatcgcccaccagaacaagtttggggaaaacatgctccac
tcacactaa
DBGET
integrated database retrieval system
