Lipotes vexillifer (Yangtze River dolphin): 103074688
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Entry
103074688 CDS
T03090
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103074688 (CHD5)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103074688 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
HDA2-3
ResIII
DEAD
PHD_2
HMG_box
AAA_22
Motif
Other DBs
NCBI-GeneID:
103074688
NCBI-ProteinID:
XP_007453343
UniProt:
A0A340WV36
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MAEWGLDDVDYPFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSA
NNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPVRKAKTKEGKGPGVRRKIK
GSKDVKKKGKGRKVAGLKFRFGGVGSKRKKGSSSEEEQREGSDLDSASIHSASVRSECSA
LMGRKSKRRRQKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKA
PEGKWSCPHCEKEGIQWEPKDDDDDEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSS
YHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGSDVEPGV
PPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYG
SGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDL
PYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDT
PIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIV
FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSF
EDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQS
KFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI
KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG
NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLR
DEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFL
LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEER
ITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVT
PIPDVQSSKGGALAASAKKKHGSTPPGDSKDVEDSSVIHYDDAAISKLLDRNQDATDDTE
LQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLAR
NLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSR
RQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLR
GKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEF
EHVNGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYLE
EKELGVQKPKKPPEIQALPTALDRAEGEDKHESSDGKERAREERPEEMEKAQPSPEQLPK
GAVLTEKDKILDKLELSLIHSRGDSSDFRPDDPKAEEKEPIETQQNGDKEEDEEGKREDK
IGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQ
DIQNDPRYMILNEPFKSEIHKGNYLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQD
PNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR
LPSMLSRIPPVAARLQMSERSILSRLTNRAGDPAIQQGAFGSSQMYSNNFGPNFRGPGPG
GIVNYNQMPLGPYVTDI
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtggggcctggacgacgtggactacccgttttcggaggccgactatcacacg
ctgaccaactacaaggccttcagccagttcctcaggccactcatcgccaagaagaacccg
aagatccccatgtccaaaatgatgaccgtcctgggcgccaagtggcgagagttcagcgcc
aacaacccctttaagggcagctcggcggcggcggccgcagcggcggtggccgcggccgtg
gagacggtcaccatcgcgcctccgctggccatcagcccccagcaggcaccccagcctgtg
cccgtccgcaaggccaagaccaaggagggcaaggggcctggagtgaggaggaagatcaaa
ggctccaaggatgtgaagaaaaagggcaaagggagaaaggtggccgggctcaagttccgc
ttcggaggggtcggcagcaagaggaagaaaggctcctcgagcgaggaggagcagcgggag
gggtcggacttggacagcgccagcatccacagcgcctccgtgcgctcggagtgttctgcc
ctgatggggaggaagagcaagaggaggcgccagaagaagagaattgatgacggtgatggc
tatgagacggaccaccaggactactgtgaggtgtgccagcagggtggggagatcatcctg
tgcgacacctgcccgagggcctaccacctcgtctgcctggacccagagctggagaaagct
cccgagggcaagtggagctgtccccactgtgagaaggaggggatccagtgggagccgaag
gacgacgacgacgacgaggaggagggcggctgcgaggaggaggaggacgaccacatggag
ttctgccgcgtgtgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcctcc
taccacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgc
ccgcgctgtacttgtcccccgctgaagggcaaagtccagcggattctgcattggaggtgg
acagagcccccagcccccttcatggtggggctgccggggtccgacgtagagcctggcgtt
ccaccacccaaacccctagagggcatcccggagagagagttctttgtcaagtgggctggg
ctctcctactggcactgctcctgggtgaaggagctacagctggagctctaccacacggtg
atgtatcgcaactaccaaagaaagaacgacatggacgagccgccgccctttgactacggc
tctggcgatgaggatggcaagagcgagaaaaggaagaacaaagaccccctctatgccaag
atggaagagcgcttctaccgctatggcatcaagcccgagtggatgatgatccaccgcatc
ctgaaccacagcttcgacaaaaagggggatgtgcattacctgatcaagtggaaagacctg
ccctacgaccagtgcacctgggagattgacgacattgacatcccctactatgacaacctg
aagcaggcctactggggccacagggaattgatgctgggggaggacgccaggctgcccaag
aggctggtcaagaagggcaagaagctgaaggacgacaaacaggagaagcccccggacacg
cccatcgtggatcccacggtcaagtttgacaagcagccgtggtacatcgactccacgggc
ggcacactgcacccgtaccagctggagggccttaactggctgcgcttttcctgggcccag
ggcaccgacaccatcctggccgatgagatgggtctgggcaagacagtgcagaccatcgtc
ttcctctactccctgtacaaggagggccactccaaggggccctacctggtcagtgcgccc
ctgtccaccatcatcaactgggaacgtgagtttgagatgtgggcgcctgacttctacgtg
gtcacctacacgggggacaaggagagccgctctgtgatccgggagaatgagttttcgttt
gaggacaatgccattcggagtgggaagaaggtattccggatgaagaaagaagtgcagatc
aaattccatgtcctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggc
tccatcgagtgggcctgcctcgtggtggatgaggcccaccggctcaagaacaaccagtcc
aagttctttagggtcttgaacagctataagatcgattacaagctgctgctgacggggacc
ccccttcagaacaacctggaggagctcttccacctgctcaatttcctgactccagagagg
ttcaacaacctggagggcttcctggaggagtttgccgacatctccaaggaagaccagatc
aagaagctgcatgacctgctggggccgcacatgctaaggcggctcaaggctgatgtattc
aagaacatgccggccaagaccgagctgatcgtccgcgtggaactgagccagatgcagaag
aagtattataagttcatcctcacgcggaacttcgaggcgctgaactccaaggggggcggg
aaccaggtgtcgctgctcaacatcatgatggatctgaagaagtgttgcaaccacccttac
ctcttcccagtggccgctgtggaggcccctgtcctgcccaacggctcctatgatggcagc
tctctggtcaagtcttcagggaagctcatgttgctgcagaagatgctcaagaaactgcgg
gacgaagggcaccgtgtacttatcttctcccagatgaccaagatgctggacctcctggag
gacttcctggagtatgagggctacaaatatgagcggattgatggtggcatcacggggggc
ctccggcaagaggcgattgacagattcaacgcccctggggcccagcagttctgcttcctg
ctctcgacccgggcaggtggcctgggcatcaacctggccacggcggacacggtcatcatc
tatgactcagactggaacccacacaatgacatccaggccttcagccgcgcccaccgcatc
gggcagaacaagaaggtgatgatctaccgcttcgtgacgcgggcctcggtggaggagcgt
atcacgcaggtggccaagcgcaagatgatgctaacccatctggtggtgcggcccggcctg
ggctccaagtccggctccatgaccaagcaggagctggacgacatcctcaagttcggcacg
gaggagctcttcaaggacgacgtggagggcatgatgtctcagggccagaggcccgtcacg
cccatccctgatgtccagtcctccaaagggggagccctggccgccagcgcgaagaaaaag
cacggcagcaccccgccaggtgacagcaaggacgtggaggacagcagtgtgatccactat
gatgatgcggccatctccaagctgctggaccgcaaccaggatgccacggatgacacggag
ctgcagaacatgaacgaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgag
gaggacggcgtggaggaggtggagcgggagatcatcaagcaggaggagaacgtggacccc
gactactgggagaagctgctccggcaccactacgagcagcagcaggaggacctggcccgc
aacctgggcaaaggcaagcgcgtccgcaagcaggtcaactacaacgacgcctcccaggag
gaccaggagtggcaggacgagctctcagacaaccagtctgaatactccattggatccgag
gatgaggacgaggactttgaagaaaggccggaagggcagagtggacggcgacaatccagg
aggcagctgaagagcgacagggacaagcccctgcccccgcttctcgcccgggtcggcggc
aacattgaggtgctgggctttaacgcccgacagcggaaggcctttttgaacgccatcatg
cgctggggcatgcctccccaggacgccttcaactcccactggctggtgcgggaccttcgc
gggaagagtgagaaggagtttagagcctacgtgtcactcttcatgcggcacctgtgtgag
ccgggggcagacggcgcggagaccttcgccgacggcgtgccccgcgagggcctctccagg
cagcacgtgctcacgcgcatcggggtcatgtcactagttaggaagaaggttcaggagttt
gagcacgtcaatggaaagtacagcaccccggatttgatccctgaggggcccgagggcaag
aagccaggcgaggtcatctcctcggatcccaacacaccagtgcccgccagccctgcccac
cttctgcctgccccgttgggcctgccagacaaaatggaagcccagctgggctacttggaa
gagaaggagctgggggtgcagaagccaaagaagcccccagaaatccaggccctgccaact
gccctggacagagcggagggtgaggacaagcacgagagctcagatggcaaggagagggcc
cgagaggagcgaccggaggagatggagaaggcccagccctccccagagcagctgccgaaa
ggtgcggtgctcactgagaaggacaagattctggacaagttggagctgagcttgattcac
agcagaggcgatagcagtgatttcaggccagatgaccccaaagccgaggagaaggagccc
attgaaacacagcaaaatggtgacaaagaggaagatgaggaagggaagagggaggataag
atcgggaagttcaagttcatgttcaacattgcagacgggggcttcacagagctacacaca
ctgtggcagaacgaggaacgtgctgctgtgtcctcggggaaaatctatgacatctggcac
cggcgccatgactactggctgctggcaggcatcgtgacgcacggctatgcccgttggcag
gacatccagaacgacccgagatacatgatcctcaacgagcccttcaagtccgagatccac
aagggcaactacctggagataaagaacaagttcctggcccgcaggttcaagctgctggag
caggcgctggtcatcgaggagcaactccggagggccgcgtacctcaacatgacccaggac
cccaaccaccccgccatggccctcaatgcccgcctggccgaggtggagtgccttgccgag
agccaccagcacctgtccaaggagtccctcgccgggaacaagcctgccaatgccgtcctg
cacaaggtcctgaaccagctggaggagctgctgagcgacatgaaggcggatgtgacgcgc
ctgccctccatgctgtcgcgcatccccccggtggctgcccgtctccagatgtcagagcgc
agcatcctgagccgcctgaccaaccgagccggggaccccgccattcagcagggcgctttc
ggctcttcccagatgtacagcaacaactttgggcccaacttccggggccctggaccggga
gggattgtcaactacaaccagatgcccctggggccctatgtgaccgatatctag
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integrated database retrieval system
