Lipotes vexillifer (Yangtze River dolphin): 103074830
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Entry
103074830 CDS
T03090
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04820
Cytoskeleton in muscle cells
lve04926
Relaxin signaling pathway
lve04933
AGE-RAGE signaling pathway in diabetic complications
lve04974
Protein digestion and absorption
lve05146
Amoebiasis
lve05165
Human papillomavirus infection
lve05200
Pathways in cancer
lve05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103074830 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103074830 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103074830 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103074830 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103074830 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
103074830 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103074830 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
103074830 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103074830 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
103074830 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103074830 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lve04147
]
103074830 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103074830 (COL4A3)
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103074830 (COL4A3)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103074830 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103074830
NCBI-ProteinID:
XP_007467975
UniProt:
A0A340Y931
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MRPGTAPRPPALLLLLQLVLLVAAPTAGKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGPP
GQKGYPGPEGLPGPQGPKGSPGLPGFTGPKGVRGTTGLPGFSGPPGLPGIPGHPGPYGPV
GFPGCNGSKGEQGFPGLRGTPGYPGIPGAVGLKGEKGAPAXXXXXXXXXXAEGEGVALDG
KGDPGLPGAPGFQGLPGLPGFPGPIGPPGPPGFFGFPGTMGPPGPKGHMGDKVIGQKGER
GMKGLSGPPGPPGTVIVTLTGLVNRTDLKGEKGDQGAVGQSGHPGPSGPPGESYGSEKGA
PGEPGPQGKPGKDGAPGFPGTEGAKGSKGFPGLRGEDGIKGWKGDMGPPGFRGPTEYYDA
YQEKGDEGIPGPPGPKGAPGPQGPSGPPGAPGSPGSSRPGLQGAPGVPGVKGSKGERGPP
GKSAAGLPGSPGCPGSPGPTGSPGPPGPPGGIVLRRGPPGDGGPPGHTGSPGIPGVDGPK
GEPGLLCTQCPCVPGPPGPPGLPGLDGVKGFPGRQGAAGIKGIPGSLGSAGLPGFPGFPG
DQGHPGLKGEKGEASQPERQVGAPGDPGPRGHPGRKGLDGIPGTPGVKGLPGPKGEPALS
GEKGDRGFPGDPGIPGSPGPAGPTGPSDYGPWGEPGPKGTQGLPGAPGPPGEAGPKGEIG
VLTPVPGPPGPPGAPGRAGPQGPPGIPGSTGKCDLGLPGPDGEPGIPGIGFPGPPGPKGD
QGFPGTKGSPGCPGEMGKPGLPGKPGLPGVKGEPGLAMPGEPGAPGLPGERGNSGEKGES
GLPGLPGLPGIPGTGGLDGPRGNPGQPGPPGERGPPGRCKESLSGAQGLPGLNGLKGQQG
RRGETGPKGDPGIPGLDRSGFPGEPGPPGTPGHRGEMGPPGTKGYPGNPGFLGPPGEKGM
IGMMGVPGNVGPPGPPGKPGTLGQRGSFGIPGVKGERGSPGAKGEQGDKGTPGPPGILRL
VGDKGEPGLKGLAGKPGEKGNRGIPGLPGFKGLQGLPGPPGSPDSRGDPGSIGNPGEPGP
RGVPGNMGNMGVPGTKGMKGTMGFPGLAGRPGLPGTHGPQGDKGEPGYSEDTRPGPPGPK
GDPGLPGDMGKKGGRGPPGTPGRSGPAAPEGVPGNPGSPGHPGKPGPDGDLGSKGIKGFP
GSPGIKGPPGPPGFPGNPGPAGERGNQGCDGIPGPAGEKGETGLLGALPGPRGKPGPQGA
KGDRGAPGLPGLPGRKGPVGDAGPRGPMGMTGPQGPPGFPGSIIPGQKGDRGPPGRRGNP
GEPGPPGPEGGPVEGIKGDKGFVGQPGPRGPPGTVGDTGPPGHPGAPGAPGLPGVRGDPG
FYGFPGMKGEKGNSGFLGPSGPPGRIGPKGPPGVRGDPGTVKIISLPGSPGPPGPAGEPG
MQGEPGPPGLPGNSGPCGPRGKPGKDGLPGTPGPIGEKGNKGCKGEQGPPGSDGPPGLKG
KPGDTGPPARGTTMRGFVFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQSHGQDLGT
LGSCLQRFTTMPFLFCNINDVCNFASRNDYSYWLSTPALMPVDMAPITGRALEPYISRCT
VCEGPAIAIAVHSQTTDIPSCPPGWISLWKGFSFVMFTSAGSEGAGQALASPGSCLEEFR
ASPFIECHGRGTCNYYSNSYSFWLASLDPRRMFRKPIPSTVKAGELEKIISRCQVCMKRR
H
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgggactgcgccgaggccgccggcgctgctgcttctgcttcagctggtgctc
ctggtggccgcgcccactgccggcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatggggccaaaggggagaagggggagaaaggctttccaggaccccctgggcctcct
ggccagaaaggatacccaggtccggaaggcctgcctggaccacagggacccaagggctct
ccaggacttccaggattcactggtcccaaaggcgtgaggggaacaactggattaccagga
ttttcaggtcctcctggacttccaggcatcccaggccatcctggaccgtatggacctgtc
ggttttccaggatgcaatggttctaagggtgagcaagggtttccaggacttcgggggaca
ccaggctacccgggcatcccgggtgccgttggtttgaaaggagagaaaggggctcctgct
gannnnnnnnnnnnnnnnnnnnnnnnnnnngctgaaggagaaggggtagcccttgatgga
aaaggtgaccctgggttgccaggagctccaggattccagggtttgccaggccttccaggc
tttcctggacctattggtccacctggccctccaggattctttggctttccaggaaccatg
ggacctccaggacctaagggtcacatgggcgataaagtgataggacaaaaaggagagcgg
ggtatgaaaggattatcaggaccgcccggaccaccaggaacagttatcgtgacactaacc
ggcctggttaacagaacggacctcaagggggagaagggagaccagggagccgtgggccag
tctggacaccctggaccctcagggccacctggagaatcttacggatcagaaaaaggtgct
cctggagaaccaggcccacagggaaagcctggaaaagatggtgcccccggtttccctggc
actgagggagccaaaggcagcaagggtttccctgggttaaggggcgaagatggcatcaag
gggtggaaaggagacatgggccctccaggatttcgtggtccaacagaatattatgatgca
taccaggaaaagggagatgaaggaattccaggcccaccagggcccaagggagctcctggc
ccacagggtcccagtggtccccctggagcccctggaagtcctgggtcatcaaggcctggc
ctccaaggagcccctggagtaccaggagtaaaaggaagtaaaggcgagcgaggaccccca
ggaaagagcgcagcggggcttcccgggtcccctggctgtcctggttcaccaggccctaca
gggtcgccaggacctccaggaccaccaggtggtattgttcttcgcagaggtccccctgga
gatggtggacctccaggccatacagggtctccaggaatcccaggagtcgatgggcccaaa
ggggagccaggccttttgtgcacacagtgtccttgtgtcccagggcctccaggcccccca
ggattgccggggttagatggcgtaaaaggattcccaggaagacaaggtgcagctggcatt
aaaggaatcccagggtccctaggaagcgctggtcttccaggatttccgggcttcccgggt
gatcagggtcatccaggacttaaaggagaaaaaggtgaagcatctcagccagagagacaa
gtgggtgccccaggggatccagggccccgaggacatcctggaagaaagggcttggatgga
attcctggaactccgggggtaaaaggattaccaggacctaagggagaaccggccctgagt
ggggagaagggggaccggggttttccaggggatcctggcatccctgggtccccaggacct
gcaggaccgactggaccatcagactatggaccttggggagagcctggtccaaagggcacc
caaggacttcctggagcccctggaccacctggagaagccggtcctaagggagaaatcggt
gttttgacaccagttccagggcccccaggacctcctggagccccaggccgtgctggcccc
caaggtccacctggtatccctggatccacaggaaaatgtgatctgggtcttcctgggcct
gatggtgaaccaggaattccaggaatcggattccctgggcctcctggacctaagggagac
caaggttttccaggaacaaaaggatcaccaggctgtcctggagaaatgggaaagccaggg
ttacctggaaagccgggcctcccaggagtcaagggagaaccagggctagccatgcctgga
gagccaggagcaccaggtttgccaggagaaagaggcaactctggggaaaagggagaaagt
ggactccctggacttccaggtctccctggaattccaggaactggagggcttgatggacca
cgagggaatccagggcagcctggaccacctggagaaagaggccccccaggaaggtgcaaa
gaaagtctcagtggagctcaaggccttccaggcttaaatggattgaaagggcaacaaggc
agaagaggtgaaacagggccaaagggagacccaggtattccaggcttggataggtcagga
tttcctggagaacctggaccaccaggaacgccgggtcatcgaggggagatgggaccacct
ggtacaaaaggatatccgggaaatccaggatttttagggccaccaggtgaaaaaggaatg
attgggatgatgggggttcccggaaacgttggccctccggggcctcctgggaagccaggc
accctgggacagagggggagctttggaattccaggagtaaaaggcgagagaggatcccca
ggtgccaaaggggaacaaggagataaaggaactccagggcctcctggaatattacgctta
gtcggggacaaaggggaaccaggactcaaaggacttgcagggaagcctggtgagaaagga
aacagaggcattccaggattaccaggtttcaaaggactccaagggctacctggaccacca
ggatcaccagactccagaggagatccaggcagcattgggaatcctggtgagccaggacca
cgtggtgtgccaggaaacatgggaaacatgggggtgccaggtactaaaggaatgaaggga
actatgggattcccaggtctagctggaagaccaggcctcccaggtactcatggtccccaa
ggagataagggagagccaggttattcagaagatacaaggccaggaccaccaggaccaaag
ggagatccaggattgccaggtgacatgggaaagaaaggaggtagagggccacctggcaca
cctggacgttcaggccccgctgcaccagagggagttcctgggaatcccggaagccctggc
cacccaggaaagcccggtcctgatggtgatttggggtctaaaggaatcaaaggtttccct
ggctctccaggaataaaaggccctccaggccctccaggattcccaggaaatcctggacca
gcaggtgagagaggtaatcaaggatgtgatggaattcctggtccagctggagaaaaagga
gaaacaggtttgctgggagcacttccaggcccaagagggaaacctggtcctcaaggagcc
aaaggagacaggggagccccaggcttgccgggcctccctggcaggaaagggccagtggga
gatgctgggcctcgagggcccatgggcatgacaggacctcaagggccaccaggctttcct
ggttccatcatccctggccaaaaaggagatcgaggtccacctggcagaagaggaaaccca
ggtgagcctggtccccctggacctgaagggggtcccgtagaaggcataaaaggagacaag
ggatttgtgggccagcctggcccaagaggtccgcctggaactgtaggagacacggggcca
ccaggtcatccgggagcaccaggtgccccaggtcttccaggggtcagaggtgatcctgga
ttctatggatttccaggcatgaaaggggagaagggtaattcaggatttctgggaccaagt
ggacctccagggcgaatcgggccaaaaggaccacctggtgtacgtggagaccctggcaca
gtgaagatcatctcccttccaggaagcccaggcccacctggcccagctggagaaccaggg
atgcaaggagaacctgggcccccggggctaccgggaaactcaggaccctgtgggccaaga
ggtaaaccaggcaaggatggactaccgggaacccctggaccaattggtgaaaaaggcaac
aaaggttgtaaaggagagcaaggaccgcctggatccgatggcccgccaggcttgaagggg
aaacctggagacactggaccacctgcaagggggacaacgatgaggggctttgtcttcacc
cggcacagccagaccacggcgattccctcctgtccagaagggacagaaccactctatagt
gggttttctcttctctttgtacaaggaaatgaacaatcccatggacaggacctgggaact
cttggcagctgcctgcagagatttactacaatgccattcttattctgcaatatcaatgat
gtatgtaatttcgcatctcgaaacgattattcatactggctgtcaacaccagctctgatg
ccagtggacatggctccaattactggccgggccctggagccttatattagcagatgcact
gtctgtgaaggtcctgcaattgccatagctgttcacagccaaactactgatatcccctca
tgtcctcctggctggatttctctctggaaaggattttctttcgtcatgttcacaagtgca
ggttcagagggcgctgggcaggcactggcatcccctggctcctgcttagaagaattccga
gccagtccatttatagaatgtcatggaagaggaacatgcaactactattcaaattcctac
agtttctggctggcttcattagaccccagaagaatgttcagaaaacctattccatcaact
gtgaaagctggggagttagaaaagataataagtcgctgtcaggtgtgcatgaagaggaga
cattga
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integrated database retrieval system