Lipotes vexillifer (Yangtze River dolphin): 103075663
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Entry
103075663 CDS
T03090
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103075663 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lve03400
]
103075663 (LIG4)
Enzymes [BR:
lve01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103075663 (LIG4)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103075663 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
103075663
NCBI-ProteinID:
XP_007462784
UniProt:
A0A340XTX4
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKARAEKIRHFKEFLDSWRKFHDALHKNQKAV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAIIAYFVLKPRCLQKGSLTIQQVNDLLDSIANNNSAQRKDLVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGFTQQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLASIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGSSPQEGSLTPFIHNAFKSDVQNCILDGEMMAYNPNTQTFMQKGSKFDIKRMVEDSDL
HTCYCVFDVLMVNDKKLGQETLRKRYEILNSVFTPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHKKAPPSCILC
GTEKPEVYIEPWNSVIVQVKATEIVPSGMYKTGCTLRFPRIENIRENKEWHECTSLEDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNINKVSNIFE
DVEFCVMSGTNSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECLETKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEMFSG
IKNAGEQTSREMGPVIADLEHRYSWDNTPLSMFRHHTVFLDLYTVINDLSTKIEGARLAI
TALELQFHGAKVVSCLAEGVSHVIIGEDQSRVADFKAFRRTLKRKFKILQERWVTESIDK
RELQEENQYLL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcacagactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaagcacgtgcagaaaaaatcagacacttcaaa
gaatttttagattcttggagaaagtttcatgatgcccttcataagaaccaaaaagctgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagagagagaatg
gcctatggcatcaaagaaactatgcttgctaagctttatattgaattgcttaacttacct
cgagaaggaaaagatgccctcaaacttctaaactacagaacacctaccggaactcgtgga
gatgctggagactttgcgataatcgcatactttgtgttgaaacccagatgcttacagaag
ggaagtttaaccatacagcaagtaaatgaccttttagactccattgccaacaataattct
gcccaaaggaaggacctagtaaagaagagtcttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgtaaaggacttgaagcttggttttactcag
caaactgtattttctgtttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaggtctgtaggcaactgcatgatccttcagttggactcagtgacatttctatc
actttattctctgcatttaaacccatgctggcctctatagcagatatcgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctagacggtgagcgtatgcag
atgcacaaggatggggacgtgtatcggtacttctcccgcaatggatataactatgaggat
cagtttggctcttccccacaggaaggttcccttacaccgttcatccataatgcattcaaa
tcagatgttcaaaactgcatcctcgatggtgagatgatggcctacaaccctaatacacaa
acttttatgcaaaaggggagtaagtttgatattaaaagaatggtagaagattctgatctg
cacacttgttactgtgtttttgatgtgttgatggttaatgataaaaagctaggacaggag
acactgagaaagaggtatgaaattcttaatagtgtttttacaccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcaatagataaaagagaagaagggatcatgataaaacatcctctgtccatttacaagcca
gataaaagaggtgaaggatggttaaaaattaaaccagagtatgtaaatgggctgatggat
gaactggacatcttaatcgtggggggctactgggggaaaggttcccggggtggaatgatg
tctcattttttgtgtgcggtgtcagagaaacccccttctggtgaaaaaccgtcagtgttt
catactctctgtcgcgttggctcaggttacaccatgaaagaactgtatgacctgggtttg
aagttggcccaacactggaagccttttcataagaaagctccaccaagttgcattttatgt
ggaacagagaagccagaggtctacatcgaaccttggaattcggtcattgttcaggttaag
gccacagagattgtccccagtggtatgtataaaactggctgcacgttgcgttttccacga
attgagaatataagagaaaacaaagaatggcatgaatgtacatctctggaggacttagaa
caacttcgagggaaagcctccggaaagctggcgtctaaacacctttatgtgggtgatgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacctaaaagcacccaacctttctaacataaacaaggtttctaatatatttgaa
gatgtggagttttgtgtcatgagtggaacaaacagccatccaaagcctgatctggagaac
agaatcgcagaatttggtggttacatagtccaaaatccaggcccagacacatactgtgtg
attgcagggtctgagaacattcgagtgaaaaacatcatctcttctgataaacacgatgtt
gtcaagccggagtggctgttagagtgtttagagaccaaaagctgtgtgccgtggcagcct
cgcttcatgattcacatgtgcccgtcgacaaaacagcactttgctcgggaatacgactgc
tacggggatagttactttgtcgatacagatttgaaccaactgaaggaaatgttctcggga
attaaaaacgctggtgaacagacttctagggaaatgggtcctgtgattgccgatttggaa
caccggtattcctgggacaacactcctcttagcatgtttcgacaccacaccgtttttttg
gacttgtatactgttattaatgacttaagtactaaaatcgagggggcaagattagctatc
acagccctggagcttcaatttcatggagcaaaagtagtttcatgcttagctgagggagtg
tctcatgtcatcattggggaggatcagagtcgggttgcagactttaaagcttttcgaaga
actcttaagagaaagtttaaaatcctacaagaacgttgggtaactgaatcaatagacaag
agggaattacaggaggaaaatcaatatttgctttga
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