KEGG   Lipotes vexillifer (Yangtze River dolphin): 103075663Help
Entry
103075663         CDS       T03090                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lve00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    103075663 (LIG4)
Enzymes [BR:lve01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103075663 (LIG4)
DNA repair and recombination proteins [BR:lve03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     103075663 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQKSKARAEKIRHFKEFLDSWRKFHDALHKNQKAV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAIIAYFVLKPRCLQKGSLTIQQVNDLLDSIANNNSAQRKDLVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGFTQQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLASIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGSSPQEGSLTPFIHNAFKSDVQNCILDGEMMAYNPNTQTFMQKGSKFDIKRMVEDSDL
HTCYCVFDVLMVNDKKLGQETLRKRYEILNSVFTPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHKKAPPSCILC
GTEKPEVYIEPWNSVIVQVKATEIVPSGMYKTGCTLRFPRIENIRENKEWHECTSLEDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNINKVSNIFE
DVEFCVMSGTNSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECLETKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEMFSG
IKNAGEQTSREMGPVIADLEHRYSWDNTPLSMFRHHTVFLDLYTVINDLSTKIEGARLAI
TALELQFHGAKVVSCLAEGVSHVIIGEDQSRVADFKAFRRTLKRKFKILQERWVTESIDK
RELQEENQYLL
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcacaaacttcacagactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaagcacgtgcagaaaaaatcagacacttcaaa
gaatttttagattcttggagaaagtttcatgatgcccttcataagaaccaaaaagctgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagagagagaatg
gcctatggcatcaaagaaactatgcttgctaagctttatattgaattgcttaacttacct
cgagaaggaaaagatgccctcaaacttctaaactacagaacacctaccggaactcgtgga
gatgctggagactttgcgataatcgcatactttgtgttgaaacccagatgcttacagaag
ggaagtttaaccatacagcaagtaaatgaccttttagactccattgccaacaataattct
gcccaaaggaaggacctagtaaagaagagtcttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgtaaaggacttgaagcttggttttactcag
caaactgtattttctgtttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaggtctgtaggcaactgcatgatccttcagttggactcagtgacatttctatc
actttattctctgcatttaaacccatgctggcctctatagcagatatcgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctagacggtgagcgtatgcag
atgcacaaggatggggacgtgtatcggtacttctcccgcaatggatataactatgaggat
cagtttggctcttccccacaggaaggttcccttacaccgttcatccataatgcattcaaa
tcagatgttcaaaactgcatcctcgatggtgagatgatggcctacaaccctaatacacaa
acttttatgcaaaaggggagtaagtttgatattaaaagaatggtagaagattctgatctg
cacacttgttactgtgtttttgatgtgttgatggttaatgataaaaagctaggacaggag
acactgagaaagaggtatgaaattcttaatagtgtttttacaccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcaatagataaaagagaagaagggatcatgataaaacatcctctgtccatttacaagcca
gataaaagaggtgaaggatggttaaaaattaaaccagagtatgtaaatgggctgatggat
gaactggacatcttaatcgtggggggctactgggggaaaggttcccggggtggaatgatg
tctcattttttgtgtgcggtgtcagagaaacccccttctggtgaaaaaccgtcagtgttt
catactctctgtcgcgttggctcaggttacaccatgaaagaactgtatgacctgggtttg
aagttggcccaacactggaagccttttcataagaaagctccaccaagttgcattttatgt
ggaacagagaagccagaggtctacatcgaaccttggaattcggtcattgttcaggttaag
gccacagagattgtccccagtggtatgtataaaactggctgcacgttgcgttttccacga
attgagaatataagagaaaacaaagaatggcatgaatgtacatctctggaggacttagaa
caacttcgagggaaagcctccggaaagctggcgtctaaacacctttatgtgggtgatgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacctaaaagcacccaacctttctaacataaacaaggtttctaatatatttgaa
gatgtggagttttgtgtcatgagtggaacaaacagccatccaaagcctgatctggagaac
agaatcgcagaatttggtggttacatagtccaaaatccaggcccagacacatactgtgtg
attgcagggtctgagaacattcgagtgaaaaacatcatctcttctgataaacacgatgtt
gtcaagccggagtggctgttagagtgtttagagaccaaaagctgtgtgccgtggcagcct
cgcttcatgattcacatgtgcccgtcgacaaaacagcactttgctcgggaatacgactgc
tacggggatagttactttgtcgatacagatttgaaccaactgaaggaaatgttctcggga
attaaaaacgctggtgaacagacttctagggaaatgggtcctgtgattgccgatttggaa
caccggtattcctgggacaacactcctcttagcatgtttcgacaccacaccgtttttttg
gacttgtatactgttattaatgacttaagtactaaaatcgagggggcaagattagctatc
acagccctggagcttcaatttcatggagcaaaagtagtttcatgcttagctgagggagtg
tctcatgtcatcattggggaggatcagagtcgggttgcagactttaaagcttttcgaaga
actcttaagagaaagtttaaaatcctacaagaacgttgggtaactgaatcaatagacaag
agggaattacaggaggaaaatcaatatttgctttga

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