Lipotes vexillifer (Yangtze River dolphin): 103077019
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Entry
103077019 CDS
T03090
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03082
ATP-dependent chromatin remodeling
lve05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103077019 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103077019 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lve03000
]
103077019 (ARID2)
03021 Transcription machinery [BR:
lve03021
]
103077019 (ARID2)
03036 Chromosome and associated proteins [BR:
lve03036
]
103077019 (ARID2)
Transcription factors [BR:
lve03000
]
Eukaryotic type
Helix-turn-helix
ARID
103077019 (ARID2)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103077019 (ARID2)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
103077019 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
103077019
NCBI-ProteinID:
XP_007463893
UniProt:
A0A340XRD9
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPNSSHQILSE
IRPQAVEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSNNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRIDSVPDVSPSPSPAGIPHGPQTVGNHFQRTPVTNQSS
SLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSIPQTAVPVSISVGGGAAQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQGVPQSHIFGRVQNMPACTSAVSQGQQLITTSPQPVQTSSQQTSAGG
QPQDTVLIAPPQYVTTSASNIVSATSVQNFQVAAGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQAV
QLAGQPNITPSSSPSPVPATNSQVPTAVSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAP
PPQQVQVQVQQPQQVQMQVQPQQTNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILPA
PQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPTGGVQ
TVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATLSQGNATQLIAPAGX
XXXXXXXXXXXXXKPLPASQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHER
KIEVMENPSCRRGTTNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCSL
ISNGPSLELGENGASGKQNSEQMDIQDIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHKT
SNHVGNGEISPMEPQGTFDATQQDTAKGDQLERISNGPVLTLGGSPSVSSIQEASNVATQ
QFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVSHFPALS
SDVRSTNGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMTPSPAVQVQSQPNSSQPSPFSASSQ
HGDPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSIKQPAVGGTSSAPRAQKAIVNHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatcccaaacca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcaaagttatgggctgtctatggacttcaattcgccaaatgattataataaa
ttggtgctttcactattatctggactcccaaatgaagtggactttgctattaatgtatgc
actctcctatcaaatgaaagcaaacatgtcatgcaacttgaaaaagaccctaaaatcatc
actttattgcttgctaatgccggggtgtttgatgacactttaggatccttttctactgta
tttggagaagaatggaaggagaagactgatagagattttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtctccgtttcctattactttctgca
catagtcattttatttctctaaggcaattaggccttgacacattaggaaatattgcagct
gagcttttattggatcctgttgatttcaaaactactcatctgatgtttcatactgttaca
aaatgcctaatgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaggataatggtgttttgatttgtgaatatgtcgatcaggattcatac
agagagatcatttgtcatctcactttacctgatgtgctgctcgtaatctcaacacttgag
gtgctatatatgctcacagaaatgggagatgtagcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttccatggatattcagatgtttggccccgat
gcactggctgcagtaaaactcgtcgaacatccaaattccagtcatcaaattttatctgaa
attaggccacaagctgtagagcaagtccaaacccagacccatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggttaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctatcaacttgcagtaaattggctcgtggtgga
atcctaacatcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagggtggaggattccagtaacaatgggcaggcacatattcatgtagtaggagtaaaa
aggagggctatcccacttcccattcagatgtactatcagcagcaacctgtttctactccc
gttgttcgtattgattctgttcctgatgtatctccaagtccttcacctgcaggaatccct
cacggaccacaaactgtaggaaaccattttcagaggactcctgttaccaaccaatcttca
agtttgactgcaacacaaatgtcttttccagtacaaggtgttcataccgtggcacagact
gtttcgagaattccaccaaatccttcagttcatacccaccagcagcaaaatgctccggtg
actgtcattcaaaataaagctccaattccttgtgaagtcgttaaggctacagtaatccag
aattctataccccagacagcagttcctgttagtatttctgtgggaggaggagctgctcag
agttctgtggttcagaatcatagtacagggccccaacctgttacagttgtgaattcccag
acattgcttcaccatccatctgtaattccacaacagtctccattacacacagtggtaccg
ggacagataccttccggcactcctgttacggtaattcaacaaggtgtcccacagagtcat
atatttggcagagtacagaacatgccagcatgtacttctgcagtttcacagggtcaacag
ttaatcaccacatcaccccaacccgtgcagacttcgtctcagcagacgtcagctggcggt
cagccacaggacactgttctcatagcacccccacagtacgtaacaacttctgcgtccaac
attgtctcggcaacttcagtacagaattttcaggtagctgcaggacaaatggttaccatt
gctggtgtcccgagtccacagccctcaagggtagggtttcagaacattgcacccaaacct
ctcccttctcagcaagtttcatcaacggtggtccaacagcctattcaacaaccacagcag
ccaacccaacaaagtgtagtgattgtaagtcagccagctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcaggcagtt
cagctagctggacaaccaaacattactccatcttcctcaccatcacctgtcccagctact
aatagccaggtccctactgccgtgtcatcttccacccctcagtcacagggaccacctcct
actgtcagtcaaatgctatctgtgaaaaggcagcaacagcagcagcattcaccagcaccc
ccaccacaacaggtacaagtacaagttcagcaaccacaacaagtacaaatgcaggttcaa
ccacagcaaacaaatgcaggagttggtcagcctgcttctggtgagtcgagtctgataaaa
cagttgctgcttccaaagcgtggtccttcaactccgggtggtaagcttattctcccagct
ccacagattcctccccctaataatgcaagagctcctagccctcaggtggtataccaggtg
gccaataatcaagcagcaggttttggagtgcaggggcaaactccagcgcagcagctattg
gttgggcagcaaaatgttcagttggtccaaagtgcgatgccacccacagggggagtgcaa
accgtgcccatctcgaacttacaaatattgccaggtccgctgatctcaaatagcccagca
accattttccaagggacttctggcaaccaggtaactataacagttgtgccaaatacaagt
tttgcaactgcaactctgagtcagggaaatgcaactcagctcattgctccagcaggnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaacccctcccagcctctcaa
gcatctccagctggacaatcatcttgtactactgctactcccccattcaaaggtgataaa
ataatttgccaaaaggaagaggaagcaaaagaagcaacaggtttacatgttcatgaacgt
aaaatcgaagtcatggagaacccatcctgcagacgaggaaccacgaacaccagcaatggg
gatacgaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtacagtgac
tcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctcacta
atcagtaatgggccatcattagaattaggtgagaatggagcatctggaaaacagaactca
gaacaaatggacatacaggatattaaaagtgatttgaaaaaacctctagttaatggaatc
tgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcacaaaact
tccaatcatgtaggaaatggtgagatatctccaatggaaccacaagggactttcgatgcc
actcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctgtatta
actttgggtggttcgccatctgtgagcagtatacaggaggcttcaaatgtggcaacacag
caatttagtggtactgatttgcctaatggacctctagcttcaagtttgaattcagatgtg
cctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgttatacagggg
catcaaatcatagccgttccccactcaggatcaagagtgtcccattttcctgccctgtca
tctgacgttcggtctacaaatggcacagcagaatgcaaaactgtgaagaggccagcagag
gataatgatagggaaacagtcacaggaattccaaataaagtgggagttagaattgttaca
atcagtgaccccaacaatgctggctgcagtgcaacaatggttgccgtgccagcaggagca
gatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcagcagcac
ccaccaacctacgtacagaatgtggtcccacagaacactcctatgacaccttcaccagct
gttcaagtgcagagccagcctaacagttctcagccttctccattcagtgcatctagtcaa
catggagatccagtgagaaaacctgggcacaacttcatgtgtctgtggcaatcttgtaaa
aagtggtttcagaccccctcacaggttttctaccatgcagcaactgaacatggagggaag
gacgtatatccagggcagtgtctttgggaaggttgtgagccttttcagcgacagaggttt
tctttcattacccacttacaggacaaacactgttcaaaggatgccctgcttgcaggatta
aaacaagacgaaccaggacaagcaggaagtcagaaatcttctatcaagcagccagctgta
gggggcacaagctcagctccgagagcacaaaaggccattgtgaatcatcccagtgctgcc
cttatggctcttaggagaggatcaagaaaccttgtctttcgagattttacagatgaaaaa
gagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggt
aaatattcagaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtgcta
gccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaatttt
acagttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
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