Lipotes vexillifer (Yangtze River dolphin): 103077122
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Entry
103077122 CDS
T03090
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103077122 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lve04990
]
103077122 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
lve04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
103077122 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
103077122
NCBI-ProteinID:
XP_007464913
UniProt:
A0A340XUH3
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQQQPLQVAKIRSQSKASGSGLCEGDEVVSINGSP
CADLTHPEVVKLMESITDSLQMLVKRPSSGISETLNSETENKNHEHLIHEGYVESTTLQI
RPATKSQYREFYIAQVKSGAPLAEDQASGACFSGSIKEETGLAPHTYDSKSGRLPEEVIL
REKAEAGQPGTVVELQLSLSQERHKRTSAPVVALLGTEKSKPPDQDPNLQHDGIVHINSV
PTNEKGEPCLRSSKIIQISSGQELRVIQGSEAGDTGLPQVEVIFDCSDRQKTEGSRLQAG
KGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPCSERDHSRPHKHRARHARLRRSESL
SERQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELDREADEE
EEEGDKEDTCEVAFLGASESEVDEELLSDTDDNTQVVNFDWDSGLVDIEKKLNRGDKMEM
LSDTTGKGALMFAKRRERMDQITAQKEEERVSGMPSREPDAAQMDGLRTMISYQRKEEQS
VRVQTSASKSYIEVSHGLGHVPQQNGFTGLSETAEAQRMIPVNRTAKPFPGSVNQPATPF
SPTRNMTSPIADFPAPPPYSAVTPPPETFSRAVSSPTAGPAQPPPWPQPGPLSQPAFYDS
SERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKKGT
GAGGDSGPEEDYLSLGAEACNFMQSPTAKQKTPPPVAPKPSVKSSSSQPVTPVSPVWSPG
VAPAQPPAFPTPNPSHGTVVSSIKIAQPSYPTARPASALSLAGPFKGPQASVSILNYTPK
PAAPTPTVNTAHTGPMGPSNELPGMSGKGAQLFAKRQSRMKKYVVDSDTVQAHAARAQSP
TPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPLAAVKSQPSAPQASKTSKKKGKKPLNALD
VMKHQPYQLNASLFTFQPPDAKDGLPAKSSVKVSSLPAMKQAIPPRPMNAGSPTNVQASS
VYSVPAYSSQPSFFAEATSPVSASPVPVAIPTSPKQESASTSYFVAPRPKFSAKKSGVTV
QQSGRSLSFPGRPVPPTISTTYPWVYQPAYSYSSKPTDGLEEANKRLTPGEAAAKSSFGL
LDDAFRPRNIQESIMANVVSAARRKVLPGPSEDWNERLSYVPQTQKANMGSFGRQEYNVV
FLPNNSMPTNSQHDSQVPYAYYRQPSRNDSEIMSMETRSDYCVSVTNCNYNPHPRGWRRQ
T
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggggattttatctgcatttccatgaccggaggggcgccctgggggttcaga
ctgcaaggtggcaaggagcagcagcagcccttacaagttgctaagatccgaagccagagc
aaagcctctgggtctgggctctgtgagggggatgaagtggtttctatcaatggcagccct
tgtgcagacctcacccacccagaagtcgtcaagctcatggagagcataacagactctctc
caaatgctcgtcaaaagaccatccagtggaataagtgagactttgaactctgaaactgaa
aacaaaaaccacgagcatctcatccatgaagggtacgtggaaagtaccaccctacagatt
cgaccagccacaaagagccagtacagggagttctacatcgcccaggtcaagagtggagct
cccctagctgaggaccaagcaagtggcgcttgtttttctgggagcataaaagaagaaaca
ggcctggctcctcacacatatgactctaaaagtggacgcttaccagaggaggttatctta
agggagaaggcagaagcggggcagccaggcactgtggttgagctacaattgtccctttca
caagagagacacaagcgcactagtgcccctgtagtggctctcctgggaactgaaaaatct
aagcctcctgaccaagatcctaatttacagcatgacgggatcgtccacataaattctgtc
cccactaatgagaaaggggagccttgtctgaggtccagcaagataatccagatctccagt
ggccaagagttgagagtgatccagggaagtgaagcaggagacaccgggctgccccaagtg
gaagtgatcttcgactgctctgataggcagaagacggaagggagcaggcttcaggcagga
aaggggtgtgtggattctccagtggaaggagggcagtcagaagcacctccttctctggta
tcctttgcagtctcatcagaaggcacagagcagggagaagatccatgctcagaaagggat
cacagcagacctcacaagcacagagcacgccacgcacggctcaggaggagtgaaagccta
tcagaaaggcaggtgaaagaagcaaaatctaaatgcaaaagcattgccctccttctgaca
gatgcccccaaccccaactccaagggggtgttgatgtttaagaagcgccgacggagggcc
aggaaatacaccctagtcagttacgggactggtgaacttgatcgagaggcagacgaggag
gaggaagaaggcgacaaagaggatacatgtgaagtagcatttctgggtgcaagcgaatcc
gaggtggacgaagagttgttgtctgacactgacgacaacacacaagttgtgaactttgac
tgggattctggactagtggacattgaaaagaaactgaacagaggggacaagatggagatg
ttgtcagacaccacaggcaagggggccctcatgtttgctaagaggagggagagaatggat
cagatcacagcccaaaaagaggaggagagggtgagtggaatgccaagcagagaaccagat
gctgcccagatggatggcctgagaaccatgatatcttaccaaaggaaggaagaacaatcg
gtgagagtgcagacctctgcgagcaaaagctacatcgaggtgagccatggccttggccat
gtgccccaacagaatggcttcactgggttgtccgagacagcagaggctcagaggatgatc
cctgtgaatagaacggccaaacccttcccggggtccgtgaaccagccagcgacccccttc
tctccaacgcgaaacatgaccagtcccattgctgactttcctgcgcctccaccttattct
gcagtcacacccccacctgaaaccttctccagagcagtgtcaagtccgacagctggccca
gcacagccccctccgtggccccagcctggcccattgtcccagccagccttttacgattca
tctgaacgaatagcttcccgggatgaaaggatcgcggtgccagcaaaaagaacaggaata
ttgcaggaggccaaaaggagaagcacgacaaaacccatgttcacttttaaagagcccaaa
gtaagcccaaatcctgaactcttgtcacttcttcaaaattcggaaggcaaaaagggaact
ggggctggaggagattccggaccagaagaagactacctcagtttaggagcagaggcttgt
aatttcatgcaaagccccactgcaaaacaaaagaccccacctcctgtcgctccaaagcct
tctgtcaagtcctcatcctcccaaccagtaactccagtttctccagtctggtcgccagga
gtggctccagcccaacctcctgccttccccacacccaacccatcacacggcaccgttgtt
tcctccatcaaaatagcgcagccttcttaccctactgcccggcctgctagtgctctgagc
ctggctggtcccttcaaaggaccacaagcatcggtatccattctgaactacactcccaaa
ccagcagctcccacaccaacggtaaacactgctcatactggcccaatgggaccatccaat
gagcttccaggaatgagtgggaaaggagcccagctctttgctaaaaggcagtcgaggatg
aaaaagtacgtggtagactcagacaccgtgcaggcccatgctgcccgtgctcagtctccc
actccatctctcccggctggctggaagtactcctccaatgtccgagcacctcctcctgtg
gcctacaatcctatccactccccctcctacccactggctgctgtcaagtcccagccatca
gccccacaggcctccaaaacaagcaagaaaaagggcaagaaaccccttaatgctttggat
gtcatgaagcaccaaccttaccagctaaatgcatccttgtttactttccaacctccggat
gcaaaggatggcctccctgcaaagtcatcagtcaaggtcagttcactgccagccatgaag
caagctattcctcctcggccaatgaatgctggctcgcccactaatgtgcaggcctcgtct
gtgtactcagtgccagcctatagctctcagccttccttctttgccgaggccacctcacca
gtaagcgcctccccagtgcccgtggccattcccacctctccaaagcaagaatcagcctcg
acatcttactttgtggcaccaaggccgaagttctcagcaaagaaaagtggtgtcacagtt
cagcagagtggacgctctctttcttttcctggaagaccagtcccacccaccatctctaca
acatatccttgggtataccagcctgcttatagctactctagcaaaccaactgatgggcta
gaggaagcaaacaagagactaactcctggggaagcagcagccaagtcttcttttggatta
ctggatgatgccttcagacccagaaacattcaggaatccattatggcaaatgtggtctca
gcagctaggaggaaagtgcttccaggaccgtctgaggattggaatgaaagactgtcctat
gtccctcaaacccagaaggccaatatgggctcatttggaaggcaagagtataatgttgta
ttcctacccaataatagtatgcccaccaactcccaacatgattcacaggtgccatatgca
tattataggcagccttccagaaatgattctgaaataatgtccatggagaccaggtctgac
tactgtgtttcagtaaccaattgcaactataacccacatccaaggggatggagacgccaa
acatga
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